FN3662-S Chr1 13180178 A-G 0 0 Single Base Substitution 0 HET FN3662-S Chr1 19706061 A-G 0 0 Single Base Substitution 0 HET FN3662-S Chr1 22622805 T-C 0 0 Single Base Substitution 0 HET FN3662-S Chr1 27412874 G-A 0 0 Single Base Substitution 0 Homo FN3662-S Chr1 31482276 T-C 0 0 Single Base Substitution 0 Homo FN3662-S Chr1 9783663 T-C 0 0 Single Base Substitution 0 HET FN3662-S Chr10 10199189 10199189 0 0 Insertion 1 HET FN3662-S Chr10 11852717 C-T 0 0 Single Base Substitution 0 HET FN3662-S Chr10 11990740 G-A 0 0 Single Base Substitution 0 HET FN3662-S Chr10 12191461 G-A 0 0 Single Base Substitution 0 HET FN3662-S Chr10 15095266 15095266 0 0 Insertion 1 HET FN3662-S Chr10 22625252 G-A 0 0 Single Base Substitution 0 HET FN3662-S Chr10 3349462 3349731 0 0 Deletion 269 frameshift_variant HET LOC_Os10g06520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3662-S Chr10 4049029 G-A 0 0 Single Base Substitution 0 HET FN3662-S Chr10 4971948 A-G 0 0 Single Base Substitution 0 HET FN3662-S Chr11 11508165 Chr8 19974189 0 Translocation 0 LOC_Os08g32220 retrotransposon protein, putative, Ty3-gypsy subclass FN3662-S Chr11 11508165 Chr8 19974189 0 Translocation 0 LOC_Os11g20000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3662-S Chr11 16959973 A-T 0 0 Single Base Substitution 0 HET FN3662-S Chr11 9181021 T-A 0 0 Single Base Substitution 0 HET FN3662-S Chr12 10923315 G-T 0 0 Single Base Substitution 0 HET FN3662-S Chr12 11244001 11256000 0 0 Deletion 11999 LOC_Os12g19370 DNA polymerase I family protein, expressed FN3662-S Chr12 17115290 17115290 0 0 Insertion 1 HET FN3662-S Chr12 22623110 Chr11 22169070 0 Translocation 0 LOC_Os11g37540 protein phosphatase 2C, putative, expressed FN3662-S Chr12 24160403 Chr3 8413587 0 Translocation 0 LOC_Os03g15380 expressed protein FN3662-S Chr12 3923903 Chr9 3034209 0 Translocation 0 FN3662-S Chr12 7318000 7318005 0 0 Deletion 5 Homo FN3662-S Chr12 8566889 Chr10 2106336 0 Translocation 0 FN3662-S Chr2 10394365 Chr1 11768770 0 Translocation 0 FN3662-S Chr2 19961648 19961661 0 0 Deletion 13 Homo FN3662-S Chr2 25676832 C-T 0 0 Single Base Substitution 0 HET FN3662-S Chr2 28198870 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g46240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3662-S Chr2 28314328 28314330 0 0 Deletion 2 frameshift_variant HET LOC_Os02g46460 peptide transporter PTR2, putative, expressed FN3662-S Chr2 33644129 T-A 0 0 Single Base Substitution 0 HET FN3662-S Chr2 34035569 C-T 0 0 Single Base Substitution 0 HET FN3662-S Chr2 34035613 T-A 0 0 Single Base Substitution 0 HET FN3662-S Chr2 7186018 7186050 0 0 Deletion 32 Homo FN3662-S Chr2 9357543 C-A 0 0 Single Base Substitution 0 Homo FN3662-S Chr3 105903 C-T 0 0 Single Base Substitution 0 HET FN3662-S Chr3 13380250 13380250 0 0 Insertion 1 HET FN3662-S Chr3 13503100 13503105 0 0 Deletion 5 HET FN3662-S Chr3 17500003 17500004 0 0 Deletion 1 frameshift_variant HET LOC_Os03g30710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3662-S Chr3 18033585 T-A 0 0 Single Base Substitution 0 HET FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33750 retrotransposon protein, putative, LINE subclass, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33760 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33770 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33790 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33800 expressed protein FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33810 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33819 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33828 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33837 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33850 retrotransposon protein, putative, Ty1-copia subclass FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33880 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33890 retrotransposon protein, putative, unclassified FN3662-S Chr3 19284001 19361000 0 0 Deletion 76999 LOC_Os03g33900 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19488001 19500000 0 0 Deletion 11999 LOC_Os03g34220 retrotransposon protein, putative, Ty3-gypsy subclass FN3662-S Chr3 19488001 19500000 0 0 Deletion 11999 LOC_Os03g34230 expressed protein FN3662-S Chr3 19488001 19500000 0 0 Deletion 11999 LOC_Os03g34240 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr3 19488001 19500000 0 0 Deletion 11999 LOC_Os03g34250 retrotransposon protein, putative, unclassified FN3662-S Chr3 27799147 27799148 0 0 Deletion 1 HET FN3662-S Chr3 28430135 28430138 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os03g49880 TCP family transcription factor, putative, expressed FN3662-S Chr3 28644077 A-T 0 0 Single Base Substitution 0 Homo FN3662-S Chr3 31068312 Chr1 16252172 0 Translocation 0 FN3662-S Chr3 9284239 T-G 0 0 Single Base Substitution 0 HET FN3662-S Chr4 12087725 12087732 0 0 Deletion 7 Homo FN3662-S Chr4 14652509 14652513 0 0 Deletion 4 Homo FN3662-S Chr4 2359340 2359340 0 0 Insertion 2 HET FN3662-S Chr4 6021136 G-A 0 0 Single Base Substitution 0 Homo FN3662-S Chr5 15367160 G-C 0 0 Single Base Substitution 0 HET FN3662-S Chr5 27316362 27316382 0 0 Deletion 20 Homo FN3662-S Chr5 5118099 G-A 0 0 Single Base Substitution 0 HET FN3662-S Chr5 7364147 Chr3 30459523 0 Translocation 0 FN3662-S Chr5 7479055 A-C 0 0 Single Base Substitution 0 Homo FN3662-S Chr5 7917874 Chr3 8412207 0 Translocation 0 LOC_Os03g15370 ubiquitin fusion protein, putative, expressed FN3662-S Chr5 9966146 9966146 0 0 Insertion 3 HET FN3662-S Chr6 14966349 14966349 0 0 Insertion 1 HET FN3662-S Chr6 29911723 G-T 0 0 Single Base Substitution 0 HET FN3662-S Chr7 11136434 G-A 0 0 Single Base Substitution 0 HET FN3662-S Chr7 27485366 T-C 0 0 Single Base Substitution 0 Homo FN3662-S Chr7 28354537 28354538 0 0 Deletion 1 Homo FN3662-S Chr7 6024437 T-C 0 0 Single Base Substitution 0 HET FN3662-S Chr8 11542155 11542155 0 0 Insertion 1 HET FN3662-S Chr8 13065670 Chr1 19825618 0 Translocation 0 LOC_Os01g35789 expressed protein FN3662-S Chr8 17046950 T-G 0 0 Single Base Substitution 0 HET FN3662-S Chr8 18253744 18253747 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os08g29720 mitochondrial carrier protein, putative, expressed FN3662-S Chr8 25935001 25956000 0 0 Deletion 20999 LOC_Os08g41000 extracellular ligand-gated ion channel, putative, expressed FN3662-S Chr8 25935001 25956000 0 0 Deletion 20999 LOC_Os08g41010 zinc finger family protein, putative, expressed FN3662-S Chr8 25935001 25956000 0 0 Deletion 20999 LOC_Os08g41020 retrotransposon protein, putative, unclassified, expressed FN3662-S Chr8 25935001 25956000 0 0 Deletion 20999 LOC_Os08g41030 AP2 domain containing protein, expressed FN3662-S Chr8 25935001 25956000 0 0 Deletion 20999 LOC_Os08g41040 expressed protein FN3662-S Chr9 14334102 14334102 0 0 Insertion 1 HET FN3662-S Chr9 17530811 G-A 0 0 Single Base Substitution 0 Homo FN3662-S Chr9 2949690 A-C 0 0 Single Base Substitution 0 HET FN3662-S Chr9 3829199 3829494 0 0 Inversion 0 FN3662-S Chr9 6573605 6764972 0 0 Inversion 0 LOC_Os09g11760 expressed protein FN3662-S Chr9 6573605 6764973 0 0 Inversion 0 LOC_Os09g11760 expressed protein FN3662-S Chr9 7474689 C-G 0 0 Single Base Substitution 0 HET