FN3667-S Chr1 10470001 10498000 0 0 Deletion 27999 LOC_Os01g18584 WRKY9, expressed FN3667-S Chr1 10470001 10498000 0 0 Deletion 27999 LOC_Os01g18610 retrotransposon protein, putative, LINE subclass, expressed FN3667-S Chr1 10470001 10498000 0 0 Deletion 27999 LOC_Os01g18620 transferase family protein, putative, expressed FN3667-S Chr1 10470001 10498000 0 0 Deletion 27999 LOC_Os01g18630 aspartic proteinase oryzasin-1 precursor, putative, expressed FN3667-S Chr1 10470001 10498000 0 0 Deletion 27999 LOC_Os01g18640 aminotransferase, putative, expressed FN3667-S Chr1 10578001 10628000 0 0 Deletion 49999 LOC_Os01g18780 fibroin heavy chain precursor, putative, expressed FN3667-S Chr1 10578001 10628000 0 0 Deletion 49999 LOC_Os01g18790 expressed protein FN3667-S Chr1 10578001 10628000 0 0 Deletion 49999 LOC_Os01g18800 CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN3667-S Chr1 15012401 T-C 0 0 Single Base Substitution 0 HET FN3667-S Chr1 16412683 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g29270 retrotransposon protein, putative, unclassified, expressed FN3667-S Chr1 25930480 T-A 0 0 Single Base Substitution 0 HET FN3667-S Chr1 32988340 32988340 0 0 Insertion 4 HET FN3667-S Chr1 338490 A-G 0 0 Single Base Substitution 0 Homo FN3667-S Chr1 35025934 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g60590 transposon protein, putative, Pong sub-class, expressed FN3667-S Chr1 35239155 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g60920 OsFBX30 - F-box domain containing protein, expressed FN3667-S Chr1 37062040 C-T 0 0 Single Base Substitution 0 HET FN3667-S Chr1 39975278 39975284 0 0 Deletion 6 HET FN3667-S Chr1 41705787 C-A 0 0 Single Base Substitution 0 HET FN3667-S Chr1 41858040 T-A 0 0 Single Base Substitution 0 HET FN3667-S Chr1 6723579 6723584 0 0 Deletion 5 HET FN3667-S Chr10 12656007 G-A 0 0 Single Base Substitution 0 HET FN3667-S Chr10 5003382 C-A 0 0 Single Base Substitution 0 HET FN3667-S Chr10 5720401 Chr2 24465250 0 Translocation 0 LOC_Os02g40400 expressed protein FN3667-S Chr11 10474882 C-A 0 0 Single Base Substitution 0 HET FN3667-S Chr11 22579375 Chr8 3761939 0 Translocation 0 LOC_Os11g38070 expressed protein FN3667-S Chr11 24005113 Chr2 8611395 0 Translocation 0 LOC_Os11g40249 expressed protein FN3667-S Chr11 26067191 Chr10 13432175 0 Translocation 0 LOC_Os10g25920 transposon protein, putative, CACTA, En/Spm sub-class FN3667-S Chr11 27121659 27121659 0 0 Insertion 208 HET FN3667-S Chr11 27311378 Chr4 20036672 0 Translocation 0 FN3667-S Chr11 9423338 A-T 0 0 Single Base Substitution 0 HET FN3667-S Chr12 16658378 16658380 0 0 Deletion 2 HET FN3667-S Chr12 19170667 C-T 0 0 Single Base Substitution 0 HET FN3667-S Chr12 4066622 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g08000 5-nucleotidase domain-containing protein, putative, expressed FN3667-S Chr12 4130499 4130499 0 0 Insertion 1 frameshift_variant HET LOC_Os12g08100 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3667-S Chr12 9228988 Chr4 7080256 0 Translocation 0 FN3667-S Chr12 9373698 G-A 0 0 Single Base Substitution 0 HET FN3667-S Chr2 16017955 G-A 0 0 Single Base Substitution 0 HET FN3667-S Chr2 31717231 A-T 0 0 Single Base Substitution 0 HET FN3667-S Chr2 34464001 34478000 0 0 Deletion 13999 LOC_Os02g56300 aminotransferase, classes I and II, domain containing protein, expressed FN3667-S Chr2 34464001 34478000 0 0 Deletion 13999 LOC_Os02g56310 calcium-dependent protein kinase isoform AK1, putative, expressed FN3667-S Chr2 34464001 34478000 0 0 Deletion 13999 LOC_Os02g56320 glycogen synthase 1, putative, expressed FN3667-S Chr2 35393001 35418000 0 0 Deletion 24999 LOC_Os02g57800 PPR repeat containing protein, expressed FN3667-S Chr2 35393001 35418000 0 0 Deletion 24999 LOC_Os02g57810 cytochrome P450, putative, expressed FN3667-S Chr2 35393001 35418000 0 0 Deletion 24999 LOC_Os02g57820 AT hook motif domain containing protein, expressed FN3667-S Chr2 35631097 C-T 0 0 Single Base Substitution 0 HET FN3667-S Chr2 4849583 C-T 0 0 Single Base Substitution 0 HET FN3667-S Chr2 5293630 5293631 0 0 Deletion 1 Homo FN3667-S Chr2 9139505 9139653 0 0 Deletion 148 HET FN3667-S Chr3 11830220 T-G 0 0 Single Base Substitution 0 HET FN3667-S Chr3 16058877 A-G 0 0 Single Base Substitution 0 HET FN3667-S Chr3 16217767 C-T 0 0 Single Base Substitution 0 Homo FN3667-S Chr3 21458001 21475000 0 0 Deletion 16999 LOC_Os03g38650 expressed protein FN3667-S Chr3 21458001 21475000 0 0 Deletion 16999 LOC_Os03g38660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3667-S Chr3 21458001 21475000 0 0 Deletion 16999 LOC_Os03g38670 expressed protein FN3667-S Chr3 21458001 21475000 0 0 Deletion 16999 LOC_Os03g38680 hypothetical protein FN3667-S Chr3 24834596 24834599 0 0 Deletion 3 Homo FN3667-S Chr3 29119072 A-G 0 0 Single Base Substitution 0 HET FN3667-S Chr3 5504283 Chr1 38091882 0 Translocation 0 LOC_Os01g65610 expressed protein FN3667-S Chr3 7378880 G-T 0 0 Single Base Substitution 0 HET FN3667-S Chr3 7553402 7553404 0 0 Deletion 2 frameshift_variant HET LOC_Os03g13920 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3667-S Chr3 8978205 G-A 0 0 Single Base Substitution 0 Homo FN3667-S Chr4 27978715 28708331 0 0 Inversion 0 FN3667-S Chr4 5671722 5671723 0 0 Deletion 1 Homo FN3667-S Chr4 8353881 Chr1 32282138 0 Translocation 0 FN3667-S Chr4 8863079 T-C 0 0 Single Base Substitution 0 HET FN3667-S Chr4 9238640 G-A 0 0 Single Base Substitution 0 HET FN3667-S Chr5 17095525 17095534 0 0 Deletion 9 HET FN3667-S Chr5 1851293 Chr4 1112574 0 Translocation 0 LOC_Os04g02850 pentatricopeptide, putative, expressed FN3667-S Chr5 22279666 22279667 0 0 Deletion 1 HET FN3667-S Chr5 27804957 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g48510 phenylalanyl-tRNA synthetase beta chain, putative, expressed FN3667-S Chr5 3532026 3532026 0 0 Insertion 3 HET FN3667-S Chr5 9131834 9131842 0 0 Deletion 8 Homo FN3667-S Chr5 9845494 9845500 0 0 Deletion 6 Homo FN3667-S Chr6 13982283 13982283 0 0 Insertion 1 HET FN3667-S Chr6 23910889 C-T 0 0 Single Base Substitution 0 HET FN3667-S Chr6 26890220 C-G 0 0 Single Base Substitution 0 HET FN3667-S Chr6 8123707 C-G 0 0 Single Base Substitution 0 HET FN3667-S Chr7 19065969 A-G 0 0 Single Base Substitution 0 HET FN3667-S Chr7 24810559 T-A 0 0 Single Base Substitution 0 Homo FN3667-S Chr7 381070 A-C 0 0 Single Base Substitution 0 Homo FN3667-S Chr7 61680 61707 0 0 Deletion 27 HET FN3667-S Chr8 11096211 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g18100 retrotransposon protein, putative, unclassified, expressed FN3667-S Chr8 11096232 A-T 0 0 Single Base Substitution 0 HET FN3667-S Chr8 1361488 Chr2 2418050 0 Translocation 0 FN3667-S Chr8 16576616 16576617 0 0 Deletion 1 HET FN3667-S Chr8 19208850 A-G 0 0 Single Base Substitution 0 Homo FN3667-S Chr8 3074105 Chr1 24215764 0 Translocation 0 FN3667-S Chr8 3074196 Chr1 24316812 0 Translocation 0 LOC_Os01g42730 GDSL-like lipase/acylhydrolase, putative, expressed FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06200 stomatin-like protein 2, putative, expressed FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06210 expressed protein FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06220 transferase, putative, expressed FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06230 nucleolar GTP-binding protein 1, putative, expressed FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06240 MYB family transcription factor, putative, expressed FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06250 tetraspanin family protein, putative, expressed FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06260 hypothetical protein FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06270 expressed protein FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06280 LSD1 zinc finger domain containing protein, expressed FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06290 expressed protein FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06300 transposon protein, putative, unclassified FN3667-S Chr8 3420001 3479000 0 0 Deletion 58999 LOC_Os08g06310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3667-S Chr8 4365469 C-T 0 0 Single Base Substitution 0 HET FN3667-S Chr8 6359561 G-C 0 0 Single Base Substitution 0 Homo FN3667-S Chr8 6794918 6794923 0 0 Deletion 5 frameshift_variant HET LOC_Os08g11590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3667-S Chr8 6964878 G-C 0 0 Single Base Substitution 0 HET FN3667-S Chr9 126515 Chr7 14047221 0 Translocation 0 FN3667-S Chr9 13779324 A-G 0 0 Single Base Substitution 0 HET FN3667-S Chr9 16609127 C-A 0 0 Single Base Substitution 0 Homo FN3667-S Chr9 16630964 16630965 0 0 Deletion 1 Homo FN3667-S Chr9 18588964 18588975 0 0 Deletion 11 Homo FN3667-S Chr9 22670836 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g39420 WD domain, G-beta repeat domain containing protein, expressed FN3667-S Chr9 4337283 4337295 0 0 Deletion 12 HET