FN3668-S Chr1 16594967 G-C 0 0 Single Base Substitution 0 HET FN3668-S Chr1 21633314 G-A 0 0 Single Base Substitution 0 Homo FN3668-S Chr1 21683882 21683896 0 0 Deletion 14 HET FN3668-S Chr1 6056604 A-T 0 0 Single Base Substitution 0 HET FN3668-S Chr10 13122731 G-A 0 0 Single Base Substitution 0 HET FN3668-S Chr10 16286989 T-C 0 0 Single Base Substitution 0 HET FN3668-S Chr10 19583735 19583736 0 0 Deletion 1 Homo FN3668-S Chr10 20737524 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g38930 shikimate/quinate 5-dehydrogenase, putative, expressed FN3668-S Chr10 7157116 7573952 0 0 Inversion 0 FN3668-S Chr10 8622148 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g17170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3668-S Chr11 12937846 C-T 0 0 Single Base Substitution 0 HET FN3668-S Chr11 16724474 Chr4 13537379 0 Translocation 0 FN3668-S Chr11 25821058 Chr5 18235053 0 Translocation 0 LOC_Os05g31380 GRAS family transcription factor containing protein, expressed FN3668-S Chr12 13900024 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g24364 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3668-S Chr12 20344229 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g33700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3668-S Chr12 20889858 20889864 0 0 Deletion 6 HET FN3668-S Chr12 6979888 Chr3 2404530 0 Translocation 0 LOC_Os03g04970 T-complex protein, putative, expressed FN3668-S Chr12 6979888 Chr3 2404530 0 Translocation 0 LOC_Os12g12664 expressed protein FN3668-S Chr2 13600144 G-C 0 0 Single Base Substitution 0 Homo FN3668-S Chr2 15175400 15175411 0 0 Deletion 11 Homo FN3668-S Chr2 15477679 A-G 0 0 Single Base Substitution 0 Homo FN3668-S Chr2 18940204 G-A 0 0 Single Base Substitution 0 HET FN3668-S Chr2 23000115 23000115 0 0 Insertion 2 HET FN3668-S Chr3 16783047 G-C 0 0 Single Base Substitution 0 Homo FN3668-S Chr3 24454245 T-C 0 0 Single Base Substitution 0 Homo FN3668-S Chr3 3408400 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g06710 PPR repeat domain containing protein, putative, expressed FN3668-S Chr4 1955347 1955347 0 0 Insertion 1 frameshift_variant HET LOC_Os04g04200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3668-S Chr4 21956394 C-T 0 0 Single Base Substitution 0 HET FN3668-S Chr4 22612219 C-A 0 0 Single Base Substitution 0 HET FN3668-S Chr4 22729646 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g38190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3668-S Chr4 25521780 25521783 0 0 Deletion 3 HET FN3668-S Chr4 27023965 C-T 0 0 Single Base Substitution 0 HET FN3668-S Chr4 31857632 31857636 0 0 Deletion 4 frameshift_variant HET LOC_Os04g53496 NBS-LRR disease resistance protein, putative, expressed FN3668-S Chr5 1506038 2042335 0 0 Inversion 0 LOC_Os05g03550 MYB family transcription factor, putative, expressed FN3668-S Chr5 1506038 2042335 0 0 Inversion 0 LOC_Os05g04430 retrotransposon protein, putative, unclassified, expressed FN3668-S Chr5 18227544 Chr1 14975601 0 Translocation 0 FN3668-S Chr5 19788477 C-A 0 0 Single Base Substitution 0 HET FN3668-S Chr5 2042340 Chr4 22602009 0 Translocation 0 LOC_Os05g04430 retrotransposon protein, putative, unclassified, expressed FN3668-S Chr5 2042788 Chr4 22602011 0 Translocation 0 LOC_Os05g04430 retrotransposon protein, putative, unclassified, expressed FN3668-S Chr5 2042902 2250197 0 0 Inversion 0 LOC_Os05g04430 retrotransposon protein, putative, unclassified, expressed FN3668-S Chr5 20611457 C-T 0 0 Single Base Substitution 0 HET FN3668-S Chr5 2250197 Chr4 22601568 0 Translocation 0 FN3668-S Chr5 6746026 6746027 0 0 Deletion 1 Homo FN3668-S Chr5 722618 Chr3 28717930 0 Translocation 0 FN3668-S Chr6 12782574 A-G 0 0 Single Base Substitution 0 HET FN3668-S Chr6 1753724 Chr5 18235054 0 Translocation 0 LOC_Os05g31380 GRAS family transcription factor containing protein, expressed FN3668-S Chr6 1753726 Chr5 18235345 0 Translocation 0 LOC_Os05g31380 GRAS family transcription factor containing protein, expressed FN3668-S Chr6 29264180 29264180 0 0 Insertion 2 HET FN3668-S Chr7 6399845 Chr5 10232217 0 Translocation 0 FN3668-S Chr7 9038288 9038294 0 0 Deletion 6 HET FN3668-S Chr8 12012735 T-C 0 0 Single Base Substitution 0 HET FN3668-S Chr8 16385214 Chr7 15520150 0 Translocation 0 FN3668-S Chr8 17769075 Chr2 13477750 0 Translocation 0 LOC_Os02g22610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3668-S Chr8 17769075 Chr2 13477750 0 Translocation 0 LOC_Os08g29020 wall-associated kinase-like 2, putative, expressed FN3668-S Chr8 25265670 C-A 0 0 Single Base Substitution 0 HET FN3668-S Chr8 25265672 T-C 0 0 Single Base Substitution 0 HET FN3668-S Chr8 28133806 G-A 0 0 Single Base Substitution 0 HET FN3668-S Chr8 6490431 T-C 0 0 Single Base Substitution 0 HET FN3668-S Chr8 8178750 Chr3 28268378 0 Translocation 0 FN3668-S Chr9 1369550 T-A 0 0 Single Base Substitution 0 HET FN3668-S Chr9 20206068 T-C 0 0 Single Base Substitution 0 HET FN3668-S Chr9 21140245 C-T 0 0 Single Base Substitution 0 HET FN3668-S Chr9 7473292 Chr4 22602007 0 Translocation 0 LOC_Os09g12970 plant protein of unknown function domain containing protein, expressed FN3668-S Chr9 7473297 Chr5 2250197 0 Translocation 0 LOC_Os09g12970 plant protein of unknown function domain containing protein, expressed