FN3677-S Chr1 11580429 C-T 0 0 Single Base Substitution 0 HET FN3677-S Chr1 12057558 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr1 16937593 C-G 0 0 Single Base Substitution 0 HET FN3677-S Chr1 18526871 C-T 0 0 Single Base Substitution 0 HET FN3677-S Chr1 20631584 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr1 21678082 C-T 0 0 Single Base Substitution 0 HET FN3677-S Chr1 2657183 2657186 0 0 Deletion 3 Homo FN3677-S Chr1 34223208 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr1 3815045 3815054 0 0 Deletion 9 HET FN3677-S Chr1 6372813 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr1 7391400 7391407 0 0 Deletion 7 Homo FN3677-S Chr1 7590474 7590474 0 0 Insertion 1 Homo FN3677-S Chr10 13764880 G-A 0 0 Single Base Substitution 0 Homo FN3677-S Chr10 14897231 14897240 0 0 Deletion 9 HET FN3677-S Chr10 18854341 19002094 0 0 Inversion 0 LOC_Os10g35280 nucleolar complex protein 2, putative, expressed FN3677-S Chr10 2443528 C-T 0 0 Single Base Substitution 0 HET FN3677-S Chr10 2701186 Chr1 39381271 0 Translocation 0 LOC_Os10g05470 expressed protein FN3677-S Chr10 4905519 4905522 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os10g09060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3677-S Chr10 6953304 6953332 0 0 Deletion 28 HET FN3677-S Chr10 8561107 8561112 0 0 Deletion 5 HET FN3677-S Chr10 8769026 8769069 0 0 Deletion 43 frameshift_variant Homo LOC_Os10g17400 retrotransposon, putative, centromere-specific, expressed FN3677-S Chr10 9058330 C-G 0 0 Single Base Substitution 0 Homo FN3677-S Chr11 6231436 C-A 0 0 Single Base Substitution 0 HET FN3677-S Chr11 6237471 C-A 0 0 Single Base Substitution 0 HET FN3677-S Chr12 1306708 A-G 0 0 Single Base Substitution 0 HET FN3677-S Chr12 16443136 16443136 0 0 Insertion 2 HET FN3677-S Chr12 16650779 Chr5 9483435 0 Translocation 0 LOC_Os05g16680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3677-S Chr12 16650779 Chr5 9483435 0 Translocation 0 LOC_Os12g28200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3677-S Chr12 16827933 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g28470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3677-S Chr12 17189074 17189074 0 0 Insertion 1 HET FN3677-S Chr12 20287837 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr2 14548931 C-T 0 0 Single Base Substitution 0 HET FN3677-S Chr2 1933813 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr2 22967377 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr2 25341931 Chr1 397476 0 Translocation 0 LOC_Os02g42134 ARF GTPase-activating domain-containing protein, putative, expressed FN3677-S Chr2 29555131 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr2 30717390 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr2 4745361 4745367 0 0 Deletion 6 HET FN3677-S Chr2 8033569 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr3 25674297 25674298 0 0 Deletion 1 HET FN3677-S Chr4 10943424 Chr3 1961150 0 Translocation 0 FN3677-S Chr4 11849950 T-C 0 0 Single Base Substitution 0 HET FN3677-S Chr4 14041242 14041242 0 0 Insertion 4 HET FN3677-S Chr4 15922120 C-T 0 0 Single Base Substitution 0 HET FN3677-S Chr4 16198940 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr4 17676636 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr4 5386704 5386706 0 0 Deletion 2 frameshift_variant Homo LOC_Os04g10010 sex determination protein tasselseed-2, putative, expressed FN3677-S Chr4 958306 958311 0 0 Deletion 5 Homo FN3677-S Chr5 17581100 G-A 0 0 Single Base Substitution 0 Homo FN3677-S Chr5 22207327 A-T 0 0 Single Base Substitution 0 HET FN3677-S Chr5 23573291 23573292 0 0 Deletion 1 Homo FN3677-S Chr5 2554112 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr5 25882940 25882942 0 0 Deletion 2 HET FN3677-S Chr5 29423998 29424002 0 0 Deletion 4 HET FN3677-S Chr5 3253811 A-C 0 0 Single Base Substitution 0 HET FN3677-S Chr5 4038957 4038958 0 0 Deletion 1 frameshift_variant HET LOC_Os05g07540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3677-S Chr6 13245580 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g22760 OsMADS71 - MADS-box family gene with M-alpha type-box, expressed FN3677-S Chr6 25923385 A-G 0 0 Single Base Substitution 0 HET FN3677-S Chr6 2738829 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g05970 DUF581 domain containing protein, expressed FN3677-S Chr6 8495737 Chr5 10856383 0 Translocation 0 FN3677-S Chr6 9343246 G-T 0 0 Single Base Substitution 0 HET FN3677-S Chr7 13010735 13489580 0 0 Inversion 0 LOC_Os07g23060 retrotransposon protein, putative, Ty3-gypsy subclass FN3677-S Chr7 13010735 13489580 0 0 Inversion 0 LOC_Os07g23880 glycosyl hydrolase, family 31, putative, expressed FN3677-S Chr7 14655390 T-A 0 0 Single Base Substitution 0 HET FN3677-S Chr7 14861265 C-A 0 0 Single Base Substitution 0 HET FN3677-S Chr7 15601024 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr7 21495793 C-T 0 0 Single Base Substitution 0 HET FN3677-S Chr7 22682470 22682476 0 0 Deletion 6 HET FN3677-S Chr7 9067522 G-T 0 0 Single Base Substitution 0 HET FN3677-S Chr8 23142653 G-C 0 0 Single Base Substitution 0 HET FN3677-S Chr8 28203544 28203544 0 0 Insertion 200 HET FN3677-S Chr9 3048283 3048283 0 0 Insertion 2 HET FN3677-S Chr9 6284111 G-A 0 0 Single Base Substitution 0 HET FN3677-S Chr9 9442664 T-C 0 0 Single Base Substitution 0 HET