FN3687-S Chr1 13995680 C-T 0 0 Single Base Substitution 0 HET FN3687-S Chr1 23751523 23751534 0 0 Deletion 11 HET FN3687-S Chr1 34071436 34071458 0 0 Deletion 22 Homo FN3687-S Chr1 34091323 C-A 0 0 Single Base Substitution 0 Homo FN3687-S Chr1 40555719 C-T 0 0 Single Base Substitution 0 HET FN3687-S Chr10 12386668 C-T 0 0 Single Base Substitution 0 HET FN3687-S Chr10 15228552 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g29260 speckle-type POZ protein, putative, expressed FN3687-S Chr10 4746836 C-G 0 0 Single Base Substitution 0 Homo FN3687-S Chr10 5264583 5264583 0 0 Insertion 1 HET FN3687-S Chr10 7370437 7370449 0 0 Deletion 12 Homo FN3687-S Chr11 10453742 10453742 0 0 Insertion 10 HET FN3687-S Chr11 12797563 C-T 0 0 Single Base Substitution 0 HET FN3687-S Chr11 14496676 Chr4 3485367 0 Translocation 0 LOC_Os04g06610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3687-S Chr11 15884647 C-A 0 0 Single Base Substitution 0 HET FN3687-S Chr11 24800518 A-G 0 0 Single Base Substitution 0 Homo FN3687-S Chr11 4963585 Chr1 37745614 0 Translocation 0 LOC_Os01g65030 S-locus-specific glycoprotein precursor, putative, expressed FN3687-S Chr12 11342750 C-A 0 0 Single Base Substitution 0 Homo FN3687-S Chr12 11347786 Chr4 15227357 0 Translocation 0 FN3687-S Chr12 14353947 14353953 0 0 Deletion 6 disruptive_inframe_deletion HET LOC_Os12g25000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3687-S Chr12 15286513 A-G 0 0 Single Base Substitution 0 Homo FN3687-S Chr12 15679677 C-A 0 0 Single Base Substitution 0 HET FN3687-S Chr12 15687570 C-A 0 0 Single Base Substitution 0 HET FN3687-S Chr12 15746801 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3687-S Chr12 21494618 Chr11 17511795 0 Translocation 0 LOC_Os12g35360 vesicle tethering family protein, putative, expressed FN3687-S Chr12 22856130 22856130 0 0 Insertion 1 Homo FN3687-S Chr12 23387439 T-A 0 0 Single Base Substitution 0 Homo FN3687-S Chr12 24696260 24696268 0 0 Deletion 8 HET FN3687-S Chr2 13294302 T-C 0 0 Single Base Substitution 0 Homo FN3687-S Chr2 30050360 C-T 0 0 Single Base Substitution 0 HET FN3687-S Chr2 35867711 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os02g58710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3687-S Chr2 4199057 4199058 0 0 Deletion 1 HET FN3687-S Chr3 26452487 G-A 0 0 Single Base Substitution 0 HET FN3687-S Chr4 1030976 1030985 0 0 Deletion 9 inframe_deletion HET LOC_Os04g02700 retrotransposon protein, putative, unclassified, expressed FN3687-S Chr4 15955832 A-G 0 0 Single Base Substitution 0 HET FN3687-S Chr4 16166177 16166178 0 0 Deletion 1 Homo FN3687-S Chr4 23311864 G-C 0 0 Single Base Substitution 0 HET FN3687-S Chr4 33429488 33429499 0 0 Deletion 11 HET FN3687-S Chr5 13340001 13364000 0 0 Deletion 23999 LOC_Os05g23360 transposon protein, putative, unclassified FN3687-S Chr5 13340001 13364000 0 0 Deletion 23999 LOC_Os05g23370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3687-S Chr5 13340001 13364000 0 0 Deletion 23999 LOC_Os05g23380 transposon protein, putative, unclassified, expressed FN3687-S Chr5 13340001 13364000 0 0 Deletion 23999 LOC_Os05g23389 retrotransposon protein, putative, Ty3-gypsy subclass FN3687-S Chr5 1512434 A-C 0 0 Single Base Substitution 0 HET FN3687-S Chr5 22485019 22485028 0 0 Deletion 9 Homo FN3687-S Chr6 1208020 Chr5 12013396 0 Translocation 0 LOC_Os05g20470 expressed protein FN3687-S Chr6 1208020 Chr5 12013396 0 Translocation 0 LOC_Os06g03200 expressed protein FN3687-S Chr6 15056285 T-A 0 0 Single Base Substitution 0 Homo FN3687-S Chr6 2790279 C-G 0 0 Single Base Substitution 0 HET FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47540 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47544 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47550 cadmium/zinc-transporting ATPase, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47560 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47570 PPR repeat containing protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47580 REV1, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47590 AP2 domain containing protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47600 thaumatin family domain containing protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47610 transposon protein, putative, unclassified, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47620 peptidase, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47630 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47640 OsCML29 - Calmodulin-related calcium sensor protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47650 phytosulfokine receptor precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47670 hypothetical protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47680 OsFBX205 - F-box domain containing protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47690 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47700 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47710 leucine-rich repeat receptor-like kinase, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47720 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47740 phytosulfokine receptor precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47750 phytosulfokine receptor precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47760 phytosulfokine receptor precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47770 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47780 TKL_IRAK_DUF26-lh.3 - DUF26 kinases have homology to DUF26 containing loci, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47800 disease resistance protein RGA3, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47810 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47820 protein kinase domain containing protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47830 RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47834 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47840 ZOS6-08 - C2H2 zinc finger protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47850 zinc finger family protein, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47860 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47870 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47880 cell division control protein 2 homolog 3, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47890 OsFBO9 - F-box and other domain containing protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47900 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47910 GDSL-like lipase/acylhydrolase, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47920 pentatricopeptide repeat domain containing protein, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47930 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47940 nifU, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47950 tetratricopeptide-like helical, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47960 nucleic acid binding protein, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47970 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47980 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g47990 transposon protein, putative, unclassified, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g48000 peroxidase precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g48010 peroxidase precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g48020 peroxidase precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g48030 peroxidase precursor, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g48040 zinc finger, C3HC4 type domain containing protein, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g48050 expressed protein FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g48060 ABC transporter, ATP-binding protein, putative, expressed FN3687-S Chr6 28779001 29086000 0 0 Deletion 306999 LOC_Os06g48065 Zinc finger, C3HC4 type domain containing protein, expressed FN3687-S Chr6 28784055 Chr5 6865901 0 Translocation 0 FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g48920 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g48930 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g48940 GHMP kinases ATP-binding protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g48950 auxin response factor 19, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g48960 AIG2-like family domain containing protein, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g48970 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g48980 protein kinase APK1B, chloroplast precursor, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g48990 Leucine Rich Repeat family protein, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49000 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49010 OsSPL12 - SBP-box gene family member, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49020 26S proteasome non-ATPase regulatory subunit 14, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49030 activator of 90 kDa heat shock protein ATPase homolog, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49040 Myb-like DNA-binding domain containing protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49050 hAT dimerisation domain containing protein, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49060 ternary complex factor MIP1, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49070 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49080 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49090 transposon protein, putative, unclassified, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49100 retrotransposon protein, putative, unclassified, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49110 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49120 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49130 TAZ zinc finger family protein, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49140 ribosomal RNA large subunit methyltransferase J, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49150 exostosin, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49160 thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49170 OsWAK64 - OsWAK receptor-like protein kinase, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49180 plant-specific domain TIGR01589 family protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49185 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49190 LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49200 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49210 retrotransposon protein, putative, unclassified, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49220 peptide transporter, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49230 peptide transporter, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49240 PTR-like peptide transporter, putatuve, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49250 peptide transporter PTR2, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49260 OsWAK65 - OsWAK receptor-like protein kinase, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49270 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49280 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49290 acanthoscurrin-1 precursor, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49300 glycosyltransferase protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49310 MATE efflux family protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49320 glycosyltransferase, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49330 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49340 OsFBDUF35 - F-box and DUF domain containing protein, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49350 retrotransposon protein, putative, unclassified, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49360 NBS-LRR disease resistance protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49370 transposon protein, putative, unclassified, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49380 NBS-LRR disease resistance protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49390 NBS-LRR disease resistance protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49410 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49420 retrotransposon protein, putative, unclassified, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49430 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49440 serine esterase, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49450 expressed protein FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49460 Rer1 protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49470 peptidyl-prolyl cis-trans isomerase, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49480 peptidyl-prolyl cis-trans isomerase, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49490 ZOS6-10 - C2H2 zinc finger protein, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49500 integral membrane protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49505 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49510 zinc knuckle family protein, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49520 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49530 OsFBX206 - F-box domain containing protein, expressed FN3687-S Chr6 29614001 30006000 0 0 Deletion 391999 LOC_Os06g49540 transposon protein, putative, unclassified, expressed FN3687-S Chr6 30061768 Chr5 6861944 0 Translocation 0 LOC_Os05g11990 TTL1, putative, expressed FN3687-S Chr6 30061768 Chr5 6861944 0 Translocation 0 LOC_Os06g49670 pentatricopeptide, putative, expressed FN3687-S Chr6 4323537 4323548 0 0 Deletion 11 frameshift_variant HET LOC_Os06g08670 glutathione peroxidase, putative, expressed FN3687-S Chr6 7855982 C-T 0 0 Single Base Substitution 0 HET FN3687-S Chr7 19511628 19511633 0 0 Deletion 5 HET FN3687-S Chr7 21078742 21078742 0 0 Insertion 10 HET FN3687-S Chr8 14304630 14304631 0 0 Deletion 1 frameshift_variant HET LOC_Os08g23630 retrotransposon protein, putative, unclassified, expressed FN3687-S Chr8 22451583 T-C 0 0 Single Base Substitution 0 Homo FN3687-S Chr9 19908888 19908889 0 0 Deletion 1 HET FN3687-S Chr9 20564720 A-T 0 0 Single Base Substitution 0 HET FN3687-S Chr9 4081073 4081073 0 0 Insertion 1 HET FN3687-S Chr9 4866449 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g09100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed