FN3694-S Chr1 19419189 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g35070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr1 19419193 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g35070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr1 22336815 C-A 0 0 Single Base Substitution 0 HET FN3694-S Chr1 30101506 30217822 0 0 Inversion 0 LOC_Os01g52560 Plant PDR ABC transporter associated domain containing protein, expressed FN3694-S Chr1 30102001 30122000 0 0 Deletion 19999 LOC_Os01g52400 bacterial transferase hexapeptide domain containing protein, expressed FN3694-S Chr1 30102001 30122000 0 0 Deletion 19999 LOC_Os01g52410 myb-like DNA-binding domain containing protein, putative, expressed FN3694-S Chr1 30102001 30122000 0 0 Deletion 19999 LOC_Os01g52420 conserved hypothetical protein FN3694-S Chr1 30122582 30218233 0 0 Inversion 0 LOC_Os01g52560 Plant PDR ABC transporter associated domain containing protein, expressed FN3694-S Chr1 6079553 G-T 0 0 Single Base Substitution 0 HET FN3694-S Chr11 13519591 C-T 0 0 Single Base Substitution 0 HET FN3694-S Chr11 20656877 A-G 0 0 Single Base Substitution 0 HET FN3694-S Chr11 4357002 4357002 0 0 Insertion 2 HET FN3694-S Chr11 4489029 C-T 0 0 Single Base Substitution 0 HET FN3694-S Chr11 7277397 7277398 0 0 Deletion 1 HET FN3694-S Chr12 23944001 23978000 0 0 Deletion 33999 LOC_Os12g38940 ZOS12-06 - C2H2 zinc finger protein, expressed FN3694-S Chr12 23944001 23978000 0 0 Deletion 33999 LOC_Os12g38950 zinc finger, C2H2 type family protein, expressed FN3694-S Chr12 23944001 23978000 0 0 Deletion 33999 LOC_Os12g38960 ZOS12-07 - C2H2 zinc finger protein, expressed FN3694-S Chr12 23944001 23978000 0 0 Deletion 33999 LOC_Os12g38970 VIP4, putative, expressed FN3694-S Chr12 23944001 23978000 0 0 Deletion 33999 LOC_Os12g38980 expressed protein FN3694-S Chr12 25565446 G-A 0 0 Single Base Substitution 0 HET FN3694-S Chr12 26149268 Chr4 16073648 0 Translocation 0 FN3694-S Chr12 697421 Chr11 650908 0 Translocation 0 FN3694-S Chr2 13222368 A-G 0 0 Single Base Substitution 0 HET FN3694-S Chr2 28634162 28634162 0 0 Insertion 4 Homo FN3694-S Chr2 360680 360680 0 0 Insertion 1 HET FN3694-S Chr3 12761134 C-T 0 0 Single Base Substitution 0 HET FN3694-S Chr3 15623646 A-G 0 0 Single Base Substitution 0 HET FN3694-S Chr3 17627872 A-G 0 0 Single Base Substitution 0 Homo FN3694-S Chr3 23341789 A-T 0 0 Single Base Substitution 0 HET FN3694-S Chr3 23341790 A-T 0 0 Single Base Substitution 0 HET FN3694-S Chr3 24610522 24661509 0 0 Inversion 0 FN3694-S Chr3 24610524 24661518 0 0 Inversion 0 FN3694-S Chr3 534669 A-T 0 0 Single Base Substitution 0 HET FN3694-S Chr4 19073637 19073877 0 0 Deletion 240 disruptive_inframe_deletion HET LOC_Os04g31860 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr4 27248177 Chr3 18277230 0 Translocation 0 FN3694-S Chr4 28819474 A-G 0 0 Single Base Substitution 0 HET FN3694-S Chr4 7350202 C-T 0 0 Single Base Substitution 0 HET FN3694-S Chr5 24775027 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g42340 ubiquitin E3 ligase ICP0, putative, expressed FN3694-S Chr5 28189520 A-C 0 0 Single Base Substitution 0 HET FN3694-S Chr5 8744001 8797000 0 0 Deletion 52999 LOC_Os05g15470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr5 8744001 8797000 0 0 Deletion 52999 LOC_Os05g15480 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8744001 8797000 0 0 Deletion 52999 LOC_Os05g15490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr5 8744001 8797000 0 0 Deletion 52999 LOC_Os05g15510 cellulase, putative, expressed FN3694-S Chr5 8744001 8797000 0 0 Deletion 52999 LOC_Os05g15520 DNA-binding protein-related, putative, expressed FN3694-S Chr5 8744001 8797000 0 0 Deletion 52999 LOC_Os05g15530 aminotransferase domain containing protein, putative, expressed FN3694-S Chr5 8744001 8797000 0 0 Deletion 52999 LOC_Os05g15540 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15600 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15610 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15620 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15630 membrane associated DUF588 domain containing protein, putative, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15640 retrotransposon, putative, centromere-specific FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15650 retrotransposon protein, putative, unclassified FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15660 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15670 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15680 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15690 expansin precursor, putative, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15700 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15710 hypothetical protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15720 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15730 retrotransposon, putative, centromere-specific, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15740 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15750 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15760 retrotransposon protein, putative, unclassified FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15770 glycosyl hydrolase, putative, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15780 hypothetical protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15790 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15800 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15810 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15820 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15850 glycosyl hydrolase, putative, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15860 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15870 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15880 glycosyl hydrolase, putative, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15890 SNF2 family N-terminal domain containing protein, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15900 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15910 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15920 glycosyl hydrolase, putative, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15930 transposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15940 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15950 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15960 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g15990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16000 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16010 retrotransposon protein, putative, LINE subclass, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16020 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16030 hypothetical protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16040 hypothetical protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16054 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16060 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16080 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16090 hypothetical protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16100 expressed protein FN3694-S Chr5 8804001 9111000 0 0 Deletion 306999 LOC_Os05g16110 expressed protein FN3694-S Chr5 8872570 C-A 0 0 Single Base Substitution 0 HET FN3694-S Chr5 9122001 9177000 0 0 Deletion 54999 LOC_Os05g16140 expressed protein FN3694-S Chr5 9122001 9177000 0 0 Deletion 54999 LOC_Os05g16160 malonyl-CoA isoflavone 7-O-glucoside-6-O-malonyltransferase, putative, expressed FN3694-S Chr5 9122001 9177000 0 0 Deletion 54999 LOC_Os05g16170 expressed protein FN3694-S Chr5 9122001 9177000 0 0 Deletion 54999 LOC_Os05g16180 NB-ARC domain containing protein, expressed FN3694-S Chr5 9122001 9177000 0 0 Deletion 54999 LOC_Os05g16200 blight resistance protein T118, putative, expressed FN3694-S Chr5 9122001 9177000 0 0 Deletion 54999 LOC_Os05g16210 glycine-rich protein, putative, expressed FN3694-S Chr5 9122001 9177000 0 0 Deletion 54999 LOC_Os05g16220 expressed protein FN3694-S Chr5 9365337 A-T 0 0 Single Base Substitution 0 HET FN3694-S Chr6 1168333 C-T 0 0 Single Base Substitution 0 Homo FN3694-S Chr6 13904097 13904097 0 0 Insertion 53 HET FN3694-S Chr6 14513685 G-A 0 0 Single Base Substitution 0 Homo FN3694-S Chr6 16047129 16047129 0 0 Insertion 353 HET FN3694-S Chr6 24807111 24807116 0 0 Deletion 5 Homo FN3694-S Chr6 29254786 29254786 0 0 Insertion 2 HET FN3694-S Chr6 700293 A-T 0 0 Single Base Substitution 0 HET FN3694-S Chr7 11938603 Chr5 21335315 0 Translocation 0 LOC_Os05g36030 retrotransposon, putative, centromere-specific FN3694-S Chr7 11938603 Chr5 21335315 0 Translocation 0 LOC_Os07g20670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr7 14835278 A-G 0 0 Single Base Substitution 0 HET FN3694-S Chr7 22554021 22554021 0 0 Insertion 1 HET FN3694-S Chr7 23476665 C-T 0 0 Single Base Substitution 0 HET FN3694-S Chr7 24247187 A-T 0 0 Single Base Substitution 0 HET FN3694-S Chr7 25686086 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g42900 helicase domain-containing protein, putative, expressed FN3694-S Chr7 26287892 26287892 0 0 Insertion 2 HET FN3694-S Chr7 29448440 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g49170 retrotransposon protein, putative, unclassified, expressed FN3694-S Chr8 16559936 16559943 0 0 Deletion 7 HET FN3694-S Chr8 24232193 Chr4 31488200 0 Translocation 0 LOC_Os04g52870 OsFBW1 - F-box domain and WD40 repeat containing protein, expressed FN3694-S Chr8 24232466 Chr4 31488198 0 Translocation 0 LOC_Os04g52870 OsFBW1 - F-box domain and WD40 repeat containing protein, expressed FN3694-S Chr8 24233001 24245000 0 0 Deletion 11999 LOC_Os08g38220 dof zinc finger domain containing protein, putative, expressed FN3694-S Chr8 24233001 24245000 0 0 Deletion 11999 LOC_Os08g38230 expressed protein FN3694-S Chr8 24233001 24245000 0 0 Deletion 11999 LOC_Os08g38240 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3694-S Chr8 27043224 Chr1 14983883 0 Translocation 0 LOC_Os01g26400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr8 5566366 T-G 0 0 Single Base Substitution 0 Homo FN3694-S Chr9 13540198 T-A 0 0 Single Base Substitution 0 HET FN3694-S Chr9 338454 Chr5 11351523 0 Translocation 0 LOC_Os05g19530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr9 338454 Chr5 11351523 0 Translocation 0 LOC_Os09g01450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3694-S Chr9 4104941 Chr4 18885959 0 Translocation 0 LOC_Os09g07980 transposon protein, putative, CACTA, En/Spm sub-class, expressed