FN3696-S Chr1 18016373 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g32830 expressed protein FN3696-S Chr1 18062517 T-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g32890 expressed protein FN3696-S Chr1 25808304 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g45490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3696-S Chr1 3498319 A-T 0 0 Single Base Substitution 0 HET FN3696-S Chr1 38021357 38608168 0 0 Inversion 0 LOC_Os01g65500 chloride channel protein, putative, expressed FN3696-S Chr1 38021366 38608186 0 0 Inversion 0 LOC_Os01g65500 chloride channel protein, putative, expressed FN3696-S Chr1 38086940 38086940 0 0 Insertion 1 HET FN3696-S Chr1 39554923 C-A 0 0 Single Base Substitution 0 HET FN3696-S Chr1 39554925 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g68040 CorA-like magnesium transporter protein, putative, expressed FN3696-S Chr1 669550 C-T 0 0 Single Base Substitution 0 HET FN3696-S Chr1 669551 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g02230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3696-S Chr10 1054151 1054151 0 0 Insertion 2 HET FN3696-S Chr10 10672185 G-A 0 0 Single Base Substitution 0 Homo FN3696-S Chr10 11674643 A-T 0 0 Single Base Substitution 0 HET FN3696-S Chr10 8733041 8733041 0 0 Insertion 3 frameshift_variant HET LOC_Os10g17340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3696-S Chr11 2728538 T-G 0 0 Single Base Substitution 0 HET FN3696-S Chr12 15051812 15051816 0 0 Deletion 4 HET FN3696-S Chr12 3664378 3664379 0 0 Deletion 1 Homo FN3696-S Chr12 9864108 C-A 0 0 Single Base Substitution 0 HET FN3696-S Chr2 13526401 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g22700 retrotransposon, putative, centromere-specific, expressed FN3696-S Chr2 17459338 17459338 0 0 Insertion 3 HET FN3696-S Chr2 2106504 2106504 0 0 Insertion 2 HET FN3696-S Chr2 27869654 27869664 0 0 Deletion 10 HET FN3696-S Chr2 3841001 3871000 0 0 Deletion 29999 LOC_Os02g07440 DEFL78 - Defensin and Defensin-like DEFL family, expressed FN3696-S Chr2 3841001 3871000 0 0 Deletion 29999 LOC_Os02g07450 core histone H2A/H2B/H3/H4, putative, expressed FN3696-S Chr2 3841001 3871000 0 0 Deletion 29999 LOC_Os02g07460 expressed protein FN3696-S Chr2 3841001 3871000 0 0 Deletion 29999 LOC_Os02g07480 transglycosylase SLT domain containing protein, expressed FN3696-S Chr2 3841001 3871000 0 0 Deletion 29999 LOC_Os02g07490 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed FN3696-S Chr2 4108185 4108189 0 0 Deletion 4 Homo FN3696-S Chr3 10129616 10129616 0 0 Insertion 4 HET FN3696-S Chr3 18276152 18437205 0 0 Inversion 0 FN3696-S Chr3 25577455 C-T 0 0 Single Base Substitution 0 Homo FN3696-S Chr3 27446823 27446842 0 0 Deletion 19 Homo FN3696-S Chr3 27746200 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os03g48674 retrotransposon protein, putative, unclassified, expressed FN3696-S Chr4 10299853 10299853 0 0 Insertion 28 HET FN3696-S Chr4 15978239 15978241 0 0 Deletion 2 HET FN3696-S Chr4 18436203 G-A 0 0 Single Base Substitution 0 HET FN3696-S Chr4 21893557 21893597 0 0 Deletion 40 Homo FN3696-S Chr4 6831048 G-A 0 0 Single Base Substitution 0 HET FN3696-S Chr5 12714867 12714867 0 0 Insertion 1 HET FN3696-S Chr5 16979668 G-T 0 0 Single Base Substitution 0 Homo FN3696-S Chr5 24386154 24386176 0 0 Deletion 22 HET FN3696-S Chr5 4124459 G-A 0 0 Single Base Substitution 0 HET FN3696-S Chr5 8011276 C-A 0 0 Single Base Substitution 0 HET FN3696-S Chr5 8159459 T-A 0 0 Single Base Substitution 0 Homo FN3696-S Chr6 17866371 A-G 0 0 Single Base Substitution 0 HET FN3696-S Chr6 22681695 G-A 0 0 Single Base Substitution 0 HET FN3696-S Chr6 3777638 3777644 0 0 Deletion 6 HET FN3696-S Chr6 9917091 9917099 0 0 Deletion 8 Homo FN3696-S Chr7 27276651 G-A 0 0 Single Base Substitution 0 HET FN3696-S Chr8 10613327 G-A 0 0 Single Base Substitution 0 HET FN3696-S Chr8 16743012 T-A 0 0 Single Base Substitution 0 HET FN3696-S Chr8 19854187 G-A 0 0 Single Base Substitution 0 Homo FN3696-S Chr8 2316747 C-T 0 0 Single Base Substitution 0 HET FN3696-S Chr8 23716980 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g37432 MATE efflux family protein, putative, expressed FN3696-S Chr8 2505043 G-T 0 0 Single Base Substitution 0 HET FN3696-S Chr8 5937785 A-G 0 0 Single Base Substitution 0 HET FN3696-S Chr9 5985178 G-A 0 0 Single Base Substitution 0 Homo