FN3701-S Chr1 11488869 11489376 0 0 Deletion 507 disruptive_inframe_deletion HET LOC_Os01g20200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3701-S Chr1 15704669 C-G 0 0 Single Base Substitution 0 HET FN3701-S Chr1 16096120 16282929 0 0 Inversion 0 FN3701-S Chr1 16096122 16282933 0 0 Inversion 0 FN3701-S Chr1 25251079 T-C 0 0 Single Base Substitution 0 HET FN3701-S Chr1 38394005 38394016 0 0 Deletion 11 HET FN3701-S Chr1 6397195 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g11830 oryzain alpha chain precursor, putative, expressed FN3701-S Chr10 12947900 12947901 0 0 Deletion 1 HET FN3701-S Chr10 15524602 15524611 0 0 Deletion 9 disruptive_inframe_deletion HET LOC_Os10g29880 expressed protein FN3701-S Chr10 17189481 17189482 0 0 Deletion 1 HET FN3701-S Chr10 20968431 C-T 0 0 Single Base Substitution 0 HET FN3701-S Chr10 21612212 21612212 0 0 Insertion 3 HET FN3701-S Chr10 5370044 5688627 0 0 Inversion 0 LOC_Os10g10350 retrotransposon protein, putative, unclassified, expressed FN3701-S Chr10 5370049 5688629 0 0 Inversion 0 LOC_Os10g10350 retrotransposon protein, putative, unclassified, expressed FN3701-S Chr10 6741759 C-G 0 0 Single Base Substitution 0 Homo FN3701-S Chr10 7893125 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g15079 retrotransposon protein, putative, unclassified, expressed FN3701-S Chr11 22362183 22362185 0 0 Deletion 2 HET FN3701-S Chr11 24621682 Chr8 9667766 0 Translocation 0 LOC_Os08g15880 NBS-LRR disease resistance protein, putative, expressed FN3701-S Chr12 15203630 T-C 0 0 Single Base Substitution 0 HET FN3701-S Chr12 22731411 22731414 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os12g37110 OsFBD16 - F-box and FBD domain containing protein, expressed FN3701-S Chr2 11649624 A-T 0 0 Single Base Substitution 0 HET FN3701-S Chr2 12160774 G-T 0 0 Single Base Substitution 0 HET FN3701-S Chr2 19631945 C-T 0 0 Single Base Substitution 0 HET FN3701-S Chr2 20526845 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed FN3701-S Chr2 25964771 C-T 0 0 Single Base Substitution 0 Homo FN3701-S Chr2 28968663 G-A 0 0 Single Base Substitution 0 Homo FN3701-S Chr2 28968666 G-A 0 0 Single Base Substitution 0 Homo FN3701-S Chr2 4876536 A-C 0 0 Single Base Substitution 0 HET FN3701-S Chr2 5214038 C-T 0 0 Single Base Substitution 0 HET FN3701-S Chr2 5327161 A-T 0 0 Single Base Substitution 0 HET FN3701-S Chr3 13529357 13529359 0 0 Deletion 2 frameshift_variant HET LOC_Os03g23840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3701-S Chr3 33238220 T-A 0 0 Single Base Substitution 0 Homo FN3701-S Chr3 35204020 35204024 0 0 Deletion 4 HET FN3701-S Chr3 449871 G-C 0 0 Single Base Substitution 0 HET FN3701-S Chr4 15186363 15186370 0 0 Deletion 7 HET FN3701-S Chr4 2160802 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g04510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3701-S Chr4 23200977 G-A 0 0 Single Base Substitution 0 HET FN3701-S Chr4 30921862 G-A 0 0 Single Base Substitution 0 HET FN3701-S Chr5 16750087 16750094 0 0 Deletion 7 frameshift_variant Homo LOC_Os05g28610 hypothetical protein FN3701-S Chr5 17772947 G-T 0 0 Single Base Substitution 0 HET FN3701-S Chr5 19291806 Chr2 17063945 0 Translocation 0 FN3701-S Chr5 230096 Chr1 42065609 0 Translocation 0 LOC_Os01g72520 phosphoesterase family protein, putative, expressed FN3701-S Chr5 230128 Chr1 42065614 0 Translocation 0 LOC_Os01g72520 phosphoesterase family protein, putative, expressed FN3701-S Chr5 29886601 T-A 0 0 Single Base Substitution 0 Homo FN3701-S Chr6 14705240 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g25130 expressed protein FN3701-S Chr6 15538940 G-A 0 0 Single Base Substitution 0 Homo FN3701-S Chr6 17868246 G-A 0 0 Single Base Substitution 0 HET FN3701-S Chr6 20688989 C-T 0 0 Single Base Substitution 0 HET FN3701-S Chr6 20689212 A-G 0 0 Single Base Substitution 0 HET FN3701-S Chr6 9473710 Chr3 16475641 0 Translocation 0 LOC_Os03g29020 transposon protein, putative, CACTA, En/Spm sub-class FN3701-S Chr7 13214470 A-T 0 0 Single Base Substitution 0 HET FN3701-S Chr7 18694457 18694461 0 0 Deletion 4 HET FN3701-S Chr7 19742495 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g33050 expressed protein FN3701-S Chr7 2769658 2769658 0 0 Insertion 2 HET FN3701-S Chr7 6470370 7075521 0 0 Inversion 0 FN3701-S Chr7 6470392 7075530 0 0 Inversion 0 FN3701-S Chr8 17577783 C-T 0 0 Single Base Substitution 0 Homo FN3701-S Chr8 23317908 23317908 0 0 Insertion 4 HET FN3701-S Chr8 247390 G-A 0 0 Single Base Substitution 0 HET FN3701-S Chr8 317541 621078 0 0 Inversion 0 LOC_Os08g01514 expressed protein FN3701-S Chr8 317541 621078 0 0 Inversion 0 LOC_Os08g01970 retrotransposon protein, putative, unclassified, expressed FN3701-S Chr9 17974347 17974354 0 0 Deletion 7 HET