FN3710-S Chr1 15752577 15752577 0 0 Insertion 5 HET FN3710-S Chr1 20623619 T-A 0 0 Single Base Substitution 0 HET FN3710-S Chr1 21518617 G-A 0 0 Single Base Substitution 0 Homo FN3710-S Chr1 24375535 A-G 0 0 Single Base Substitution 0 HET FN3710-S Chr1 27514412 T-A 0 0 Single Base Substitution 0 HET FN3710-S Chr1 29918479 C-A 0 0 Single Base Substitution 0 Homo FN3710-S Chr1 30933008 T-G 0 0 Single Base Substitution 0 HET FN3710-S Chr1 31115885 A-T 0 0 Single Base Substitution 0 Homo FN3710-S Chr10 18088930 18088931 0 0 Deletion 1 Homo FN3710-S Chr10 19578756 G-A 0 0 Single Base Substitution 0 Homo FN3710-S Chr10 3218192 C-T 0 0 Single Base Substitution 0 HET FN3710-S Chr10 4577263 T-C 0 0 Single Base Substitution 0 Homo FN3710-S Chr11 12790488 G-A 0 0 Single Base Substitution 0 HET FN3710-S Chr11 19619708 Chr4 2530360 0 Translocation 0 LOC_Os04g05104 retrotransposon protein, putative, unclassified, expressed FN3710-S Chr11 21439604 C-G 0 0 Single Base Substitution 0 HET FN3710-S Chr11 23237926 T-C 0 0 Single Base Substitution 0 Homo FN3710-S Chr11 24138931 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g40460 retrotransposon protein, putative, unclassified, expressed FN3710-S Chr11 24830135 Chr10 20543868 0 Translocation 0 FN3710-S Chr11 5162575 T-A 0 0 Single Base Substitution 0 HET FN3710-S Chr11 7073666 Chr7 17406846 0 Translocation 0 LOC_Os07g29610 PQ loop repeat domain containing protein, expressed FN3710-S Chr11 7073666 Chr7 17406846 0 Translocation 0 LOC_Os11g12590 expressed protein FN3710-S Chr12 12832251 T-A 0 0 Single Base Substitution 0 HET FN3710-S Chr12 1671209 G-C 0 0 Single Base Substitution 0 HET FN3710-S Chr12 17698399 C-T 0 0 Single Base Substitution 0 HET FN3710-S Chr12 21952014 C-T 0 0 Single Base Substitution 0 HET FN3710-S Chr12 22828384 A-G 0 0 Single Base Substitution 0 HET FN3710-S Chr12 23625965 A-G 0 0 Single Base Substitution 0 HET FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14350 transposon protein, putative, CACTA, En/Spm sub-class FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14360 transposon protein, putative, unclassified, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14374 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14420 retrotransposon protein, putative, Ty3-gypsy subclass FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14430 retrotransposon protein, putative, unclassified, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14440 Jacalin-like lectin domain containing protein, putative, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14450 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14460 retrotransposon protein, putative, Ty3-gypsy subclass FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14480 cysteine-rich receptor-like protein kinase 23 precursor, putative, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14490 retrotransposon protein, putative, unclassified FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14500 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14510 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14520 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14530 retrotransposon protein, putative, unclassified FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14540 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14550 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14570 hypothetical protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14580 tetraspanin family protein, putative, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14590 retrotransposon protein, putative, unclassified FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14610 cysteine-rich receptor-like protein kinase 32 precursor, putative, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14630 retrotransposon protein, putative, LINE subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14640 transposon protein, putative, CACTA, En/Spm sub-class FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14660 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14670 hypothetical protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14680 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14699 protein kinase domain containing protein, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14720 retrotransposon protein, putative, unclassified, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14730 hypothetical protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14750 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14764 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14780 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14820 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14830 hydrolase, putative, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14840 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14850 hypothetical protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14860 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14870 expressed protein FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14880 retrotransposon protein, putative, unclassified FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14890 retrotransposon protein, putative, unclassified, expressed FN3710-S Chr12 8175001 8529000 0 0 Deletion 353999 LOC_Os12g14900 retrotransposon protein, putative, unclassified, expressed FN3710-S Chr12 8546001 8556000 0 0 Deletion 9999 FN3710-S Chr12 951980 A-G 0 0 Single Base Substitution 0 HET FN3710-S Chr2 10442382 G-A 0 0 Single Base Substitution 0 Homo FN3710-S Chr2 1289698 1289699 0 0 Deletion 1 frameshift_variant Homo LOC_Os02g03230 membrane related protein CP5, putative, expressed FN3710-S Chr2 14812997 14813000 0 0 Deletion 3 HET FN3710-S Chr2 27430097 T-G 0 0 Single Base Substitution 0 HET FN3710-S Chr3 24006530 A-C 0 0 Single Base Substitution 0 HET FN3710-S Chr3 26761919 26761919 0 0 Insertion 382 HET FN3710-S Chr3 30904914 G-C 0 0 Single Base Substitution 0 HET FN3710-S Chr3 32704677 T-C 0 0 Single Base Substitution 0 HET FN3710-S Chr3 9548594 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g17164 kinesin-related protein, putative, expressed FN3710-S Chr4 11295488 11295488 0 0 Insertion 2 HET FN3710-S Chr4 13446669 C-T 0 0 Single Base Substitution 0 HET FN3710-S Chr4 16308004 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g27560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3710-S Chr4 17228964 Chr2 2392457 0 Translocation 0 LOC_Os02g05030 sucrose-phosphatase, putative, expressed FN3710-S Chr4 17228974 Chr2 2392038 0 Translocation 0 LOC_Os02g05030 sucrose-phosphatase, putative, expressed FN3710-S Chr4 2264621 A-T 0 0 Single Base Substitution 0 Homo FN3710-S Chr4 28729759 Chr1 2755001 0 Translocation 0 LOC_Os01g05770 expressed protein FN3710-S Chr4 28808470 28845402 0 0 Inversion 0 LOC_Os04g48370 RNA polymerase IV subunit, putative, expressed FN3710-S Chr4 3034944 G-C 0 0 Single Base Substitution 0 HET FN3710-S Chr4 33878125 33915596 0 0 Inversion 0 FN3710-S Chr4 33878128 33915624 0 0 Inversion 0 FN3710-S Chr4 4784732 A-G 0 0 Single Base Substitution 0 HET FN3710-S Chr4 4882420 A-G 0 0 Single Base Substitution 0 HET FN3710-S Chr4 5751437 C-A 0 0 Single Base Substitution 0 HET FN3710-S Chr4 5840895 Chr2 28281115 0 Translocation 0 FN3710-S Chr5 20489501 T-G 0 0 Single Base Substitution 0 Homo FN3710-S Chr5 22076579 T-A 0 0 Single Base Substitution 0 HET FN3710-S Chr5 7773715 7773716 0 0 Deletion 1 Homo FN3710-S Chr6 15839476 G-A 0 0 Single Base Substitution 0 HET FN3710-S Chr6 17578178 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g30420 PPR repeat domain containing protein, putative, expressed FN3710-S Chr6 18247541 Chr4 25155880 0 Translocation 0 LOC_Os06g31350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3710-S Chr6 31076053 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g51310 PAZ domain containing protein, putative, expressed FN3710-S Chr6 5308305 C-G 0 0 Single Base Substitution 0 HET FN3710-S Chr7 10511352 Chr3 23252800 0 Translocation 0 FN3710-S Chr7 20932247 G-A 0 0 Single Base Substitution 0 Homo FN3710-S Chr7 26139528 T-C 0 0 Single Base Substitution 0 HET FN3710-S Chr7 3243281 T-A 0 0 Single Base Substitution 0 HET FN3710-S Chr7 6384986 G-A 0 0 Single Base Substitution 0 HET FN3710-S Chr8 10737103 C-T 0 0 Single Base Substitution 0 HET FN3710-S Chr8 16320933 Chr5 3090326 0 Translocation 0 LOC_Os08g26840 plant protein of unknown function domain containing protein, expressed FN3710-S Chr8 18426031 Chr2 18430727 0 Translocation 0 LOC_Os02g30880 retrotransposon protein, putative, unclassified, expressed FN3710-S Chr8 18426031 Chr2 18430727 0 Translocation 0 LOC_Os08g29990 retrotransposon protein, putative, unclassified, expressed FN3710-S Chr8 18606063 T-G 0 0 Single Base Substitution 0 Homo FN3710-S Chr8 22435969 G-A 0 0 Single Base Substitution 0 HET FN3710-S Chr8 22435972 G-A 0 0 Single Base Substitution 0 HET FN3710-S Chr8 27625769 Chr3 8424106 0 Translocation 0 FN3710-S Chr8 28334585 A-G 0 0 Single Base Substitution 0 Homo FN3710-S Chr8 3240572 Chr5 8132884 0 Translocation 0 LOC_Os05g14420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3710-S Chr8 5229295 G-A 0 0 Single Base Substitution 0 HET FN3710-S Chr9 15779636 A-C 0 0 Single Base Substitution 0 HET FN3710-S Chr9 18079311 18079334 0 0 Deletion 23 frameshift_variant HET LOC_Os09g29730 transposon protein, putative, CACTA, En/Spm sub-class FN3710-S Chr9 20664709 G-T 0 0 Single Base Substitution 0 HET FN3710-S Chr9 21124249 21124250 0 0 Deletion 1 HET FN3710-S Chr9 3902792 G-A 0 0 Single Base Substitution 0 HET