FN3714-S Chr1 10532504 T-C 0 0 Single Base Substitution 0 HET FN3714-S Chr1 10684922 10684927 0 0 Deletion 5 HET FN3714-S Chr1 10810001 10823000 0 0 Deletion 12999 LOC_Os01g19140 O-sialoglycoprotein endopeptidase, putative, expressed FN3714-S Chr1 10810001 10823000 0 0 Deletion 12999 LOC_Os01g19150 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN3714-S Chr1 10810001 10823000 0 0 Deletion 12999 LOC_Os01g19160 protein kinase domain containing protein, expressed FN3714-S Chr1 15443981 C-T 0 0 Single Base Substitution 0 HET FN3714-S Chr1 17064482 A-T 0 0 Single Base Substitution 0 HET FN3714-S Chr1 22678826 22678828 0 0 Deletion 2 HET FN3714-S Chr1 26474428 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr1 27281072 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr1 29333294 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr1 39160822 G-T 0 0 Single Base Substitution 0 Homo FN3714-S Chr1 5286007 T-A 0 0 Single Base Substitution 0 HET FN3714-S Chr1 6104311 G-T 0 0 Single Base Substitution 0 HET FN3714-S Chr1 9099361 9099365 0 0 Deletion 4 frameshift_variant HET LOC_Os01g16124 retrotransposon protein, putative, unclassified, expressed FN3714-S Chr1 9185076 9185078 0 0 Deletion 2 HET FN3714-S Chr10 11007907 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g21490 expressed protein FN3714-S Chr10 12201047 T-C 0 0 Single Base Substitution 0 HET FN3714-S Chr10 14389750 14389765 0 0 Deletion 15 HET FN3714-S Chr10 21661501 T-A 0 0 Single Base Substitution 0 HET FN3714-S Chr10 21661502 C-T 0 0 Single Base Substitution 0 HET FN3714-S Chr10 21661503 A-T 0 0 Single Base Substitution 0 HET FN3714-S Chr10 5336646 5336676 0 0 Deletion 30 Homo FN3714-S Chr10 7763578 7763579 0 0 Deletion 1 Homo FN3714-S Chr10 824779 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr11 13356439 13356440 0 0 Deletion 1 frameshift_variant Homo LOC_Os11g23200 retrotransposon protein, putative, unclassified, expressed FN3714-S Chr11 18978244 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr11 19438677 19438678 0 0 Deletion 1 HET FN3714-S Chr11 20726003 20726006 0 0 Deletion 3 HET FN3714-S Chr11 21354702 C-T 0 0 Single Base Substitution 0 Homo FN3714-S Chr11 21354703 C-T 0 0 Single Base Substitution 0 Homo FN3714-S Chr11 27077873 Chr7 21220132 0 Translocation 0 FN3714-S Chr11 27077880 Chr7 21219937 0 Translocation 0 FN3714-S Chr12 14726685 T-C 0 0 Single Base Substitution 0 HET FN3714-S Chr12 15008203 15008218 0 0 Deletion 15 HET FN3714-S Chr12 16434348 16434358 0 0 Deletion 10 frameshift_variant HET LOC_Os12g27870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3714-S Chr12 18394749 C-A 0 0 Single Base Substitution 0 HET FN3714-S Chr12 19983708 G-A 0 0 Single Base Substitution 0 Homo FN3714-S Chr12 22503550 22503562 0 0 Deletion 12 Homo FN3714-S Chr12 23275427 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g37870 ATP-grasp domain containing protein, expressed FN3714-S Chr12 26388877 26388890 0 0 Deletion 13 HET FN3714-S Chr12 3500564 3500575 0 0 Deletion 11 HET FN3714-S Chr12 8947468 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr12 9082131 9082143 0 0 Deletion 12 HET FN3714-S Chr2 16828699 T-A 0 0 Single Base Substitution 0 HET FN3714-S Chr2 17001269 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g28730 expressed protein FN3714-S Chr2 20292057 20292057 0 0 Insertion 138 HET FN3714-S Chr2 20549654 20549669 0 0 Deletion 15 disruptive_inframe_deletion HET LOC_Os02g34350 retrotransposon protein, putative, unclassified, expressed FN3714-S Chr2 34924778 34924780 0 0 Deletion 2 Homo FN3714-S Chr2 4054127 G-A 0 0 Single Base Substitution 0 Homo FN3714-S Chr2 8464518 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr2 9701403 9701404 0 0 Deletion 1 frameshift_variant Homo LOC_Os02g16990 retrotransposon protein, putative, unclassified, expressed FN3714-S Chr3 16325379 16325380 0 0 Deletion 1 HET FN3714-S Chr3 17778537 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr3 19251318 A-C 0 0 Single Base Substitution 0 HET FN3714-S Chr3 21954834 21954839 0 0 Deletion 5 HET FN3714-S Chr3 24212446 G-A 0 0 Single Base Substitution 0 Homo FN3714-S Chr3 32928111 32928398 0 0 Inversion 0 LOC_Os03g57780 protein kinase, putative, expressed FN3714-S Chr3 33608451 33608452 0 0 Deletion 1 frameshift_variant HET LOC_Os03g59040 squalene synthetase, putative, expressed FN3714-S Chr3 35576413 C-G 0 0 Single Base Substitution 0 HET FN3714-S Chr3 3744571 3744679 0 0 Inversion 0 LOC_Os03g07370 HNH endonuclease domain-containing protein, putative, expressed FN3714-S Chr3 8082187 8082198 0 0 Deletion 11 HET FN3714-S Chr4 10922750 10922751 0 0 Deletion 1 frameshift_variant HET LOC_Os04g19610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3714-S Chr4 23596210 T-C 0 0 Single Base Substitution 0 HET FN3714-S Chr4 23635221 23635526 0 0 Inversion 0 LOC_Os04g39670 expressed protein FN3714-S Chr4 23917467 C-T 0 0 Single Base Substitution 0 HET FN3714-S Chr4 24322217 24322222 0 0 Deletion 5 HET FN3714-S Chr4 25933266 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr4 28223352 A-G 0 0 Single Base Substitution 0 HET FN3714-S Chr4 28893437 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g48460 cytochrome P450, putative, expressed FN3714-S Chr4 29737760 G-C 0 0 Single Base Substitution 0 Homo FN3714-S Chr4 3120940 T-G 0 0 Single Base Substitution 0 Homo FN3714-S Chr4 3158188 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g06080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3714-S Chr4 31680269 A-T 0 0 Single Base Substitution 0 HET FN3714-S Chr4 31680273 A-G 0 0 Single Base Substitution 0 HET FN3714-S Chr4 32922231 32922237 0 0 Deletion 6 Homo FN3714-S Chr4 33608057 33608059 0 0 Deletion 2 HET FN3714-S Chr4 6505943 C-T 0 0 Single Base Substitution 0 HET FN3714-S Chr4 9823576 9823576 0 0 Insertion 1 frameshift_variant HET LOC_Os04g17880 retrotransposon protein, putative, unclassified, expressed FN3714-S Chr5 12145716 12145728 0 0 Deletion 12 HET FN3714-S Chr5 13678443 Chr2 16818197 0 Translocation 0 FN3714-S Chr5 16930125 16930127 0 0 Deletion 2 HET FN3714-S Chr5 2226967 2226969 0 0 Deletion 2 HET FN3714-S Chr5 23624714 23625131 0 0 Inversion 0 LOC_Os05g40220 transposon protein, putative, unclassified, expressed FN3714-S Chr5 49552 49552 0 0 Insertion 2 HET FN3714-S Chr5 4961001 4969000 0 0 Deletion 7999 LOC_Os05g08960 ubiquitin-conjugating enzyme, putative, expressed FN3714-S Chr5 4961001 4969000 0 0 Deletion 7999 LOC_Os05g08970 SSRP1-like FACT complex subunit, putative, expressed FN3714-S Chr6 11199814 11199817 0 0 Deletion 3 HET FN3714-S Chr6 15405516 Chr4 31987837 0 Translocation 0 LOC_Os04g53670 expressed protein FN3714-S Chr6 15595452 T-A 0 0 Single Base Substitution 0 Homo FN3714-S Chr6 15860641 C-T 0 0 Single Base Substitution 0 HET FN3714-S Chr6 29040600 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr6 3937446 A-G 0 0 Single Base Substitution 0 HET FN3714-S Chr7 11542306 G-A 0 0 Single Base Substitution 0 HET FN3714-S Chr7 13724565 A-T 0 0 Single Base Substitution 0 HET FN3714-S Chr7 148209 T-C 0 0 Single Base Substitution 0 HET FN3714-S Chr7 1996919 2046844 0 0 Inversion 0 LOC_Os07g04530 GYF domain containing protein, putative, expressed FN3714-S Chr7 1996919 2046844 0 0 Inversion 0 LOC_Os07g04600 hypothetical protein FN3714-S Chr7 1997094 2046855 0 0 Inversion 0 LOC_Os07g04530 GYF domain containing protein, putative, expressed FN3714-S Chr7 1997094 2046855 0 0 Inversion 0 LOC_Os07g04600 hypothetical protein FN3714-S Chr7 21202729 21219936 0 0 Inversion 0 FN3714-S Chr7 21203194 21220139 0 0 Inversion 0 FN3714-S Chr7 21210342 21210350 0 0 Deletion 8 HET FN3714-S Chr7 2455168 2455171 0 0 Deletion 3 HET FN3714-S Chr7 3163956 3163959 0 0 Deletion 3 HET FN3714-S Chr7 4543598 T-A 0 0 Single Base Substitution 0 HET FN3714-S Chr7 634561 634561 0 0 Insertion 5 HET FN3714-S Chr7 7800486 C-G 0 0 Single Base Substitution 0 HET FN3714-S Chr8 16399824 16399825 0 0 Deletion 1 HET FN3714-S Chr8 20444446 G-A 0 0 Single Base Substitution 0 Homo FN3714-S Chr8 22786861 22786883 0 0 Deletion 22 Homo FN3714-S Chr8 2398536 T-G 0 0 Single Base Substitution 0 Homo FN3714-S Chr8 687906 T-C 0 0 Single Base Substitution 0 HET FN3714-S Chr9 11679057 C-T 0 0 Single Base Substitution 0 HET FN3714-S Chr9 13720579 13720580 0 0 Deletion 1 HET FN3714-S Chr9 1485983 1485984 0 0 Deletion 1 HET FN3714-S Chr9 1706465 C-T 0 0 Single Base Substitution 0 HET