FN3725-S Chr1 10569576 A-T 0 0 Single Base Substitution 0 HET FN3725-S Chr1 22189538 22263591 0 0 Inversion 0 FN3725-S Chr1 22324877 A-C 0 0 Single Base Substitution 0 HET FN3725-S Chr1 31918102 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g55400 expressed protein FN3725-S Chr1 34144454 C-T 0 0 Single Base Substitution 0 Homo FN3725-S Chr1 41752963 T-G 0 0 Single Base Substitution 0 HET FN3725-S Chr1 42573941 T-C 0 0 Single Base Substitution 0 HET FN3725-S Chr10 12723232 12723232 0 0 Insertion 3 HET FN3725-S Chr10 21101407 C-T 0 0 Single Base Substitution 0 Homo FN3725-S Chr10 21518892 Chr7 19716045 0 Translocation 0 LOC_Os07g33000 retrotransposon protein, putative, unclassified, expressed FN3725-S Chr10 3231683 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g06290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3725-S Chr10 5498237 T-C 0 0 Single Base Substitution 0 HET FN3725-S Chr10 7814808 C-T 0 0 Single Base Substitution 0 HET FN3725-S Chr11 15147106 C-T 0 0 Single Base Substitution 0 HET FN3725-S Chr12 19284019 T-C 0 0 Single Base Substitution 0 HET FN3725-S Chr12 5080823 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g09640 protein phosphatase 2C, putative, expressed FN3725-S Chr2 12470378 C-T 0 0 Single Base Substitution 0 HET FN3725-S Chr2 12470383 A-T 0 0 Single Base Substitution 0 HET FN3725-S Chr2 12470385 A-T 0 0 Single Base Substitution 0 HET FN3725-S Chr2 17544303 C-T 0 0 Single Base Substitution 0 HET FN3725-S Chr2 24980641 25221806 0 0 Inversion 0 LOC_Os02g41970 retrotransposon, putative, centromere-specific FN3725-S Chr2 8412118 8412118 0 0 Insertion 2 HET FN3725-S Chr2 9382348 T-A 0 0 Single Base Substitution 0 HET FN3725-S Chr3 10339071 C-T 0 0 Single Base Substitution 0 HET FN3725-S Chr3 24374368 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3725-S Chr3 24891332 24891340 0 0 Deletion 8 HET FN3725-S Chr3 24998849 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g44420 tubulin/FtsZ domain containing protein, putative, expressed FN3725-S Chr3 26235074 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g46390 ras-related protein, putative, expressed FN3725-S Chr3 26235205 26235218 0 0 Deletion 13 splice_acceptor_variant&inframe_deletion&splice_region_variant&intron_variant HET LOC_Os03g46390 ras-related protein, putative, expressed FN3725-S Chr3 3087275 A-T 0 0 Single Base Substitution 0 Homo FN3725-S Chr3 6506541 G-A 0 0 Single Base Substitution 0 Homo FN3725-S Chr4 12909940 12910460 0 0 Deletion 520 HET FN3725-S Chr4 24612955 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g41500 expressed protein FN3725-S Chr4 29881808 G-A 0 0 Single Base Substitution 0 HET FN3725-S Chr4 29881810 A-G 0 0 Single Base Substitution 0 HET FN3725-S Chr4 30915369 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g52050 TNP1, putative, expressed FN3725-S Chr4 30915370 C-A 0 0 Single Base Substitution 0 HET FN3725-S Chr4 3142925 3142927 0 0 Deletion 2 HET FN3725-S Chr4 5305427 Chr3 8410970 0 Translocation 0 LOC_Os03g15370 ubiquitin fusion protein, putative, expressed FN3725-S Chr4 5305740 Chr3 8410969 0 Translocation 0 LOC_Os03g15370 ubiquitin fusion protein, putative, expressed FN3725-S Chr4 6091827 6137441 0 0 Inversion 0 LOC_Os04g11230 retrotransposon protein, putative, unclassified, expressed FN3725-S Chr4 6091830 6137440 0 0 Inversion 0 LOC_Os04g11230 retrotransposon protein, putative, unclassified, expressed FN3725-S Chr4 6882972 6882979 0 0 Deletion 7 Homo FN3725-S Chr4 8819834 8819834 0 0 Insertion 1 HET FN3725-S Chr4 9547905 9547909 0 0 Deletion 4 Homo FN3725-S Chr5 13207047 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g23150 retrotransposon protein, putative, unclassified, expressed FN3725-S Chr5 13207048 C-A 0 0 Single Base Substitution 0 HET FN3725-S Chr5 17094520 C-T 0 0 Single Base Substitution 0 HET FN3725-S Chr5 3954800 Chr4 32423209 0 Translocation 0 LOC_Os04g54500 POLGAMMA2, putative, expressed FN3725-S Chr5 3958756 Chr4 32423195 0 Translocation 0 LOC_Os04g54500 POLGAMMA2, putative, expressed FN3725-S Chr5 3958756 Chr4 32423195 0 Translocation 0 LOC_Os05g07420 S-domain receptor-like protein kinase, putative, expressed FN3725-S Chr5 4597475 G-A 0 0 Single Base Substitution 0 HET FN3725-S Chr6 14763122 14763255 0 0 Inversion 0 FN3725-S Chr6 15006413 G-A 0 0 Single Base Substitution 0 HET FN3725-S Chr6 16386396 G-A 0 0 Single Base Substitution 0 HET FN3725-S Chr6 16984110 Chr5 3978736 0 Translocation 0 LOC_Os06g29620 hypothetical protein FN3725-S Chr6 16984128 17473686 0 0 Inversion 0 LOC_Os06g29620 hypothetical protein FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g29950 MATE domain containing protein, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g29960 retrotransposon protein, putative, Ty1-copia subclass FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g29970 expressed protein FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g29994 MATE efflux family protein, putative, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30020 PSP domain containing protein, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30030 DUF617 domain containing protein, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30060 expressed protein FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30090 helix-loop-helix DNA-binding domain containing protein, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30110 retrotransposon protein, putative, unclassified, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30120 retrotransposon protein, putative, unclassified, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30130 cysteine-rich receptor-like protein kinase 10 precursor, putative, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30140 transposon protein, putative, unclassified, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30150 retrotransposon protein, putative, Ty3-gypsy subclass FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30160 retrotransposon, putative, centromere-specific FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30179 cytochrome P450, putative, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30200 transposon protein, putative, CACTA, En/Spm sub-class FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30210 expressed protein FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30230 expressed protein FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30240 hypothetical protein FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30250 expressed protein FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30270 retrotransposon protein, putative, unclassified, expressed FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30280 expressed protein FN3725-S Chr6 17245001 17484000 0 0 Deletion 238999 LOC_Os06g30290 transposon protein, putative, unclassified, expressed FN3725-S Chr6 20169790 20169793 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os06g34710 expressed protein FN3725-S Chr6 4103940 Chr1 19280025 0 Translocation 0 LOC_Os01g34890 GLUCAN SYNTHASE-LIKE protein, putative, expressed FN3725-S Chr7 1429269 G-C 0 0 Single Base Substitution 0 HET FN3725-S Chr7 20060633 T-G 0 0 Single Base Substitution 0 HET FN3725-S Chr7 28173836 28173836 0 0 Insertion 1 Homo FN3725-S Chr7 9092249 G-T 0 0 Single Base Substitution 0 HET FN3725-S Chr8 14996783 Chr1 41858429 0 Translocation 0 FN3725-S Chr8 2075366 G-T 0 0 Single Base Substitution 0 HET FN3725-S Chr8 2451426 2451430 0 0 Deletion 4 HET FN3725-S Chr8 25937422 25937426 0 0 Deletion 4 HET FN3725-S Chr8 5590274 C-A 0 0 Single Base Substitution 0 HET FN3725-S Chr9 14806864 14806864 0 0 Insertion 2 HET