FN3738-S Chr1 30235364 G-C 0 0 Single Base Substitution 0 Homo FN3738-S Chr1 40271284 40271286 0 0 Deletion 2 HET FN3738-S Chr10 12303422 C-T 0 0 Single Base Substitution 0 HET FN3738-S Chr10 17703327 A-G 0 0 Single Base Substitution 0 HET FN3738-S Chr10 21389624 Chr2 25852950 0 Translocation 0 FN3738-S Chr10 21390907 Chr2 25852943 0 Translocation 0 LOC_Os10g39950 viral A-type inclusion protein repeat containing protein, expressed FN3738-S Chr10 2544820 C-A 0 0 Single Base Substitution 0 HET FN3738-S Chr10 6481727 6481727 0 0 Insertion 2 HET FN3738-S Chr11 2544877 2544877 0 0 Insertion 2 HET FN3738-S Chr11 27830603 27830603 0 0 Insertion 4 HET FN3738-S Chr12 1058851 Chr8 13116844 0 Translocation 0 FN3738-S Chr12 22459668 G-A 0 0 Single Base Substitution 0 HET FN3738-S Chr12 8769411 G-A 0 0 Single Base Substitution 0 Homo FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02620 zinc finger, C3HC4 type domain containing protein, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02630 cytochrome P450 72A1, putative, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02640 cytochrome P450 72A1, putative, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02660 expressed protein FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02670 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02680 expressed protein FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02690 expressed protein FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02700 harpin-induced protein 1 domain containing protein, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02710 expressed protein FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02720 DUF567 domain containing protein, putative, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02730 histidine triad family protein, putative, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02750 expressed protein FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02760 DUF567 domain containing protein, putative, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02770 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02780 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02790 expressed protein FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02800 CRP11 - Cysteine-rich family protein precursor, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02810 protein kinase domain containing protein, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02814 retrotransposon protein, putative, unclassified, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02820 cytidylyltransferase domain containing protein, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02830 SNF7 domain containing protein, putative, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02840 ATCHX, putative, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02850 expressed protein FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02860 retrotransposon protein, putative, unclassified FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02870 GRAS family transcription factor domain containing protein, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02880 E2F-related protein, putative, expressed FN3738-S Chr12 901001 1061000 0 0 Deletion 159999 LOC_Os12g02890 retrotransposon protein, putative, SINE subclass, expressed FN3738-S Chr12 903031 Chr8 13116523 0 Translocation 0 FN3738-S Chr2 32039001 32058000 0 0 Deletion 18999 LOC_Os02g52340 OsMADS22 - MADS-box family gene with MIKCc type-box, expressed FN3738-S Chr2 32039001 32058000 0 0 Deletion 18999 LOC_Os02g52350 expressed protein FN3738-S Chr2 32039001 32058000 0 0 Deletion 18999 LOC_Os02g52360 peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed FN3738-S Chr2 32039001 32058000 0 0 Deletion 18999 LOC_Os02g52370 armadillo/beta-catenin repeat family protein, putative, expressed FN3738-S Chr2 32039105 32919676 0 0 Inversion 0 LOC_Os02g52340 OsMADS22 - MADS-box family gene with MIKCc type-box, expressed FN3738-S Chr2 32102510 32919687 0 0 Inversion 0 LOC_Os02g52470 ATP-binding domain-containing protein, putative, expressed FN3738-S Chr2 6166458 C-T 0 0 Single Base Substitution 0 Homo FN3738-S Chr3 11182447 A-G 0 0 Single Base Substitution 0 Homo FN3738-S Chr3 12935273 12935273 0 0 Insertion 2 HET FN3738-S Chr3 20399142 A-T 0 0 Single Base Substitution 0 HET FN3738-S Chr3 22603849 22603851 0 0 Deletion 2 HET FN3738-S Chr3 3384111 3457594 0 0 Inversion 0 FN3738-S Chr3 3384125 3457607 0 0 Inversion 0 FN3738-S Chr3 5274250 T-C 0 0 Single Base Substitution 0 Homo FN3738-S Chr3 757417 757419 0 0 Deletion 2 HET FN3738-S Chr4 11739351 11739351 0 0 Insertion 1486 HET FN3738-S Chr4 23943104 23943105 0 0 Deletion 1 HET FN3738-S Chr4 24151392 A-G 0 0 Single Base Substitution 0 HET FN3738-S Chr4 24395989 C-T 0 0 Single Base Substitution 0 HET FN3738-S Chr4 6535378 6535386 0 0 Deletion 8 frameshift_variant Homo LOC_Os04g11910 transposon protein, putative, unclassified, expressed FN3738-S Chr5 15682444 15682444 0 0 Insertion 3 HET FN3738-S Chr5 18217872 T-C 0 0 Single Base Substitution 0 Homo FN3738-S Chr5 18943990 T-A 0 0 Single Base Substitution 0 Homo FN3738-S Chr5 199611 199619 0 0 Deletion 8 frameshift_variant HET LOC_Os05g01310 ankyrin repeat family protein, putative, expressed FN3738-S Chr5 20002787 20002788 0 0 Deletion 1 Homo FN3738-S Chr5 23071399 23071412 0 0 Deletion 13 frameshift_variant HET LOC_Os05g39330 retrotransposon protein, putative, unclassified, expressed FN3738-S Chr6 28765655 29086526 0 0 Inversion 0 LOC_Os06g47510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3738-S Chr6 28765655 29086526 0 0 Inversion 0 LOC_Os06g48070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3738-S Chr7 13244706 13244706 0 0 Insertion 1 HET FN3738-S Chr7 18984209 A-T 0 0 Single Base Substitution 0 HET FN3738-S Chr7 20431189 20431189 0 0 Insertion 1 frameshift_variant HET LOC_Os07g34150 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3738-S Chr7 5895850 G-T 0 0 Single Base Substitution 0 Homo FN3738-S Chr8 17231744 T-A 0 0 Single Base Substitution 0 HET FN3738-S Chr8 17231745 G-A 0 0 Single Base Substitution 0 HET FN3738-S Chr8 21647394 C-T 0 0 Single Base Substitution 0 HET FN3738-S Chr8 2392683 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g04790 xylosyltransferase, putative, expressed FN3738-S Chr8 27719955 Chr5 17393325 0 Translocation 0 LOC_Os08g44030 hypothetical protein FN3738-S Chr8 5874842 C-T 0 0 Single Base Substitution 0 HET FN3738-S Chr9 12162175 C-A 0 0 Single Base Substitution 0 HET FN3738-S Chr9 4039404 Chr5 26216807 0 Translocation 0 LOC_Os05g45150 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed FN3738-S Chr9 4039609 Chr5 26216808 0 Translocation 0 LOC_Os05g45150 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed