FN3759-S Chr1 10793145 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g19100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3759-S Chr1 15097950 C-T 0 0 Single Base Substitution 0 HET FN3759-S Chr1 19022734 C-T 0 0 Single Base Substitution 0 HET FN3759-S Chr1 20947275 C-T 0 0 Single Base Substitution 0 HET FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38380 plant protein of unknown function domain containing protein, expressed FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38390 expressed protein FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38430 plant protein of unknown function domain containing protein, expressed FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38440 transposon protein, putative, unclassified, expressed FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38450 hypothetical protein FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38460 retrotransposon protein, putative, unclassified, expressed FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38480 GA18326-PA, putative, expressed FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38490 expressed protein FN3759-S Chr1 21554001 21631000 0 0 Deletion 76999 LOC_Os01g38500 DUF538 domain containing protein, putative, expressed FN3759-S Chr1 21872308 T-C 0 0 Single Base Substitution 0 HET FN3759-S Chr1 22513808 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g39930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3759-S Chr1 33277974 G-A 0 0 Single Base Substitution 0 Homo FN3759-S Chr1 38835720 38835721 0 0 Deletion 1 frameshift_variant HET LOC_Os01g66870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3759-S Chr1 9682375 9784386 0 0 Inversion 0 FN3759-S Chr1 9682381 9784389 0 0 Inversion 0 FN3759-S Chr10 11334327 G-A 0 0 Single Base Substitution 0 Homo FN3759-S Chr10 17360244 17360245 0 0 Deletion 1 frameshift_variant HET LOC_Os10g33130 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed FN3759-S Chr10 4934277 C-A 0 0 Single Base Substitution 0 HET FN3759-S Chr11 22016444 22016449 0 0 Deletion 5 Homo FN3759-S Chr11 22254099 22254106 0 0 Deletion 7 Homo FN3759-S Chr11 23494001 23527000 0 0 Deletion 32999 LOC_Os11g39450 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed FN3759-S Chr11 23494001 23527000 0 0 Deletion 32999 LOC_Os11g39460 retrotransposon protein, putative, unclassified, expressed FN3759-S Chr11 23494001 23527000 0 0 Deletion 32999 LOC_Os11g39470 retrotransposon protein, putative, unclassified FN3759-S Chr11 23494001 23527000 0 0 Deletion 32999 LOC_Os11g39480 jacalin-like lectin domain containing protein, expressed FN3759-S Chr11 23494001 23527000 0 0 Deletion 32999 LOC_Os11g39490 jacalin-like lectin domain containing protein, expressed FN3759-S Chr11 23494001 23527000 0 0 Deletion 32999 LOC_Os11g39500 hypothetical protein FN3759-S Chr11 23494001 23527000 0 0 Deletion 32999 LOC_Os11g39510 retrotransposon protein, putative, unclassified, expressed FN3759-S Chr11 257538 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g01439 chloroplast unusual positioning protein, putative, expressed FN3759-S Chr11 257539 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g01439 chloroplast unusual positioning protein, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07040 CAMK_CAMK_like.43 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07050 FHA domain containing protein, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07060 receptor protein kinase CLAVATA1 precursor, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07070 expressed protein FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07080 transposon protein, putative, unclassified, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07090 pectinesterase, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07100 receptor-like protein kinase precursor, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07120 receptor kinase-like protein, identical, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07124 EFR, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07130 receptor kinase, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07140 receptor kinase, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07150 retrotransposon protein, putative, unclassified, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07160 receptor protein kinase CLAVATA1 precursor, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07170 receptor kinase, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07180 receptor protein kinase CLAVATA1 precursor, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07190 expressed protein FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07200 receptor protein kinase CLAVATA1 precursor, putative, expressed FN3759-S Chr11 3495001 3627000 0 0 Deletion 131999 LOC_Os11g07220 retrotransposon protein, putative, unclassified, expressed FN3759-S Chr11 3631001 3670000 0 0 Deletion 38999 LOC_Os11g07225 expressed protein FN3759-S Chr11 3631001 3670000 0 0 Deletion 38999 LOC_Os11g07230 receptor kinase, putative, expressed FN3759-S Chr11 3631001 3670000 0 0 Deletion 38999 LOC_Os11g07240 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed FN3759-S Chr11 3631001 3670000 0 0 Deletion 38999 LOC_Os11g07250 receptor kinase, putative, expressed FN3759-S Chr11 3631001 3670000 0 0 Deletion 38999 LOC_Os11g07260 expressed protein FN3759-S Chr11 3631001 3670000 0 0 Deletion 38999 LOC_Os11g07270 expressed protein FN3759-S Chr11 3631001 3670000 0 0 Deletion 38999 LOC_Os11g07280 coatomer subunit beta-1, putative, expressed FN3759-S Chr12 12316782 12316785 0 0 Deletion 3 inframe_deletion HET LOC_Os12g21870 type II intron maturase protein, putative, expressed FN3759-S Chr12 14995788 Chr11 6168977 0 Translocation 0 LOC_Os11g11150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3759-S Chr12 14995788 Chr11 6168977 0 Translocation 0 LOC_Os12g25850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3759-S Chr12 4070966 4528931 0 0 Inversion 0 LOC_Os12g08800 las1-like family protein, putative, expressed FN3759-S Chr12 4070976 4678061 0 0 Inversion 0 FN3759-S Chr12 4529001 4595000 0 0 Deletion 65999 LOC_Os12g08800 las1-like family protein, putative, expressed FN3759-S Chr12 4529001 4595000 0 0 Deletion 65999 LOC_Os12g08810 VTC2, putative, expressed FN3759-S Chr12 4529001 4595000 0 0 Deletion 65999 LOC_Os12g08820 growth regulator related protein, putative, expressed FN3759-S Chr12 4529001 4595000 0 0 Deletion 65999 LOC_Os12g08830 thylakoid lumenal 29.8 kDa protein, putative, expressed FN3759-S Chr12 4529001 4595000 0 0 Deletion 65999 LOC_Os12g08840 hypothetical protein FN3759-S Chr12 4529001 4595000 0 0 Deletion 65999 LOC_Os12g08850 expressed protein FN3759-S Chr12 4529001 4595000 0 0 Deletion 65999 LOC_Os12g08860 expressed protein FN3759-S Chr12 4529001 4595000 0 0 Deletion 65999 LOC_Os12g08870 hypothetical protein FN3759-S Chr12 4600001 4672000 0 0 Deletion 71999 LOC_Os12g08890 transposon protein, putative, CACTA, En/Spm sub-class FN3759-S Chr12 4600001 4672000 0 0 Deletion 71999 LOC_Os12g08900 expressed protein FN3759-S Chr12 4600001 4672000 0 0 Deletion 71999 LOC_Os12g08920 peroxidase precursor, putative, expressed FN3759-S Chr12 4600001 4672000 0 0 Deletion 71999 LOC_Os12g08930 expressed protein FN3759-S Chr12 4600001 4672000 0 0 Deletion 71999 LOC_Os12g08940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3759-S Chr12 4600001 4672000 0 0 Deletion 71999 LOC_Os12g08950 retrotransposon, putative, centromere-specific, expressed FN3759-S Chr12 4671227 Chr8 5769384 0 Translocation 0 LOC_Os12g08950 retrotransposon, putative, centromere-specific, expressed FN3759-S Chr12 4672447 Chr8 5772993 0 Translocation 0 FN3759-S Chr2 10195616 C-T 0 0 Single Base Substitution 0 HET FN3759-S Chr2 12113308 C-A 0 0 Single Base Substitution 0 HET FN3759-S Chr2 14658133 Chr1 17010103 0 Translocation 0 FN3759-S Chr2 14924873 C-A 0 0 Single Base Substitution 0 HET FN3759-S Chr2 1506900 1506900 0 0 Insertion 60 HET FN3759-S Chr2 25540233 25540254 0 0 Deletion 21 Homo FN3759-S Chr2 4926913 C-T 0 0 Single Base Substitution 0 HET FN3759-S Chr3 1475489 A-C 0 0 Single Base Substitution 0 Homo FN3759-S Chr3 15822283 C-T 0 0 Single Base Substitution 0 HET FN3759-S Chr3 22575500 G-A 0 0 Single Base Substitution 0 HET FN3759-S Chr3 23340757 23340759 0 0 Deletion 2 HET FN3759-S Chr3 24568160 24568167 0 0 Deletion 7 HET FN3759-S Chr3 30048052 A-G 0 0 Single Base Substitution 0 HET FN3759-S Chr4 2301652 2301652 0 0 Insertion 2 HET FN3759-S Chr4 28209250 28209255 0 0 Deletion 5 frameshift_variant HET LOC_Os04g47560 retrotransposon protein, putative, unclassified, expressed FN3759-S Chr4 6763121 T-A 0 0 Single Base Substitution 0 Homo FN3759-S Chr5 17635280 C-G 0 0 Single Base Substitution 0 HET FN3759-S Chr5 500547 500547 0 0 Insertion 2 HET FN3759-S Chr6 14215155 14215156 0 0 Deletion 1 HET FN3759-S Chr6 20924596 G-A 0 0 Single Base Substitution 0 HET FN3759-S Chr6 23659429 23659430 0 0 Deletion 1 Homo FN3759-S Chr6 23937684 23937690 0 0 Deletion 6 Homo FN3759-S Chr6 3429327 3429350 0 0 Deletion 23 HET FN3759-S Chr6 8875925 Chr2 18782950 0 Translocation 0 LOC_Os02g31310 retrotransposon protein, putative, LINE subclass, expressed FN3759-S Chr7 1050979 1050994 0 0 Deletion 15 HET FN3759-S Chr7 22117876 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g36940 eukaryotic translation initiation factor 4G, putative, expressed FN3759-S Chr7 26103847 G-T 0 0 Single Base Substitution 0 Homo FN3759-S Chr7 4028155 4028155 0 0 Insertion 2 HET FN3759-S Chr7 696342 696343 0 0 Deletion 1 Homo FN3759-S Chr7 9604084 9604084 0 0 Insertion 1 HET FN3759-S Chr8 15881606 G-C 0 0 Single Base Substitution 0 HET FN3759-S Chr8 23745044 G-C 0 0 Single Base Substitution 0 HET FN3759-S Chr8 4900870 Chr2 31398300 0 Translocation 0 LOC_Os02g51280 TCP-domain protein, putative, expressed FN3759-S Chr8 4902448 Chr2 31398306 0 Translocation 0 LOC_Os02g51280 TCP-domain protein, putative, expressed FN3759-S Chr8 5769397 Chr5 22128415 0 Translocation 0 FN3759-S Chr8 5769714 Chr5 22128406 0 Translocation 0 FN3759-S Chr9 20960620 G-A 0 0 Single Base Substitution 0 Homo