FN3784-S Chr1 14942611 14942614 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os01g26340 dirigent, putative FN3784-S Chr1 20395545 G-T 0 0 Single Base Substitution 0 Homo FN3784-S Chr1 20395550 A-T 0 0 Single Base Substitution 0 Homo FN3784-S Chr1 22498604 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr1 34278946 34278950 0 0 Deletion 4 frameshift_variant Homo LOC_Os01g59300 expressed protein FN3784-S Chr1 35879903 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr1 6522882 A-G 0 0 Single Base Substitution 0 HET FN3784-S Chr1 7874774 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr10 14520686 G-A 0 0 Single Base Substitution 0 HET FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20170 expressed protein FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20179 expressed protein FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20190 retrotransposon protein, putative, Ty1-copia subclass FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20210 retrotransposon protein, putative, Ty3-gypsy subclass FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20239 expressed protein FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20260 retrotransposon protein, putative, unclassified, expressed FN3784-S Chr11 11660001 11713000 0 0 Deletion 52999 LOC_Os11g20270 retrotransposon protein, putative, unclassified, expressed FN3784-S Chr11 13594884 Chr8 7149673 0 Translocation 0 FN3784-S Chr11 26765681 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr11 411549 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr11 6236499 6236500 0 0 Deletion 1 HET FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14810 expressed protein FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14820 expressed protein FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14830 retrotransposon protein, putative, unclassified, expressed FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14840 retrotransposon protein, putative, unclassified, expressed FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14860 expressed protein FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14870 expressed protein FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14880 LTPL32 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14890 expressed protein FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14900 thiol protease SEN102 precursor, putative, expressed FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14910 NADP-dependent oxidoreductase, putative, expressed FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 8331001 8409000 0 0 Deletion 77999 LOC_Os11g14930 expressed protein FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g14980 pentatricopeptide, putative, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g14990 expressed protein FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15000 expressed protein FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15010 transposon protein, putative, Mutator sub-class, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15020 expressed protein FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15030 SAM dependent carboxyl methyltransferase, putative, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15040 S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase, putative, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15050 expressed protein FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15060 SAM dependent carboxyl methyltransferase, putative, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15110 nucleic acid binding protein, putative, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15130 jasmonate O-methyltransferase, putative, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15140 retrotransposon, putative, centromere-specific, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15150 retrotransposon, putative, centromere-specific, expressed FN3784-S Chr11 8436001 8546000 0 0 Deletion 109999 LOC_Os11g15170 transposon protein, putative, unclassified, expressed FN3784-S Chr11 9184928 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g16570 expressed protein FN3784-S Chr12 16831683 16831683 0 0 Insertion 1 HET FN3784-S Chr12 22769248 T-C 0 0 Single Base Substitution 0 HET FN3784-S Chr12 739121 G-A 0 0 Single Base Substitution 0 HET FN3784-S Chr12 9424544 9424545 0 0 Deletion 1 HET FN3784-S Chr2 8888674 8888675 0 0 Deletion 1 HET FN3784-S Chr3 36249423 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr3 4471448 4471456 0 0 Deletion 8 HET FN3784-S Chr3 5232239 T-A 0 0 Single Base Substitution 0 Homo FN3784-S Chr3 5232240 T-C 0 0 Single Base Substitution 0 Homo FN3784-S Chr4 15273890 15273890 0 0 Insertion 4 HET FN3784-S Chr4 16144001 16180000 0 0 Deletion 35999 LOC_Os04g27320 transposon protein, putative, unclassified FN3784-S Chr4 16144001 16180000 0 0 Deletion 35999 LOC_Os04g27330 hypothetical protein FN3784-S Chr4 16144001 16180000 0 0 Deletion 35999 LOC_Os04g27340 terpene synthase, putative, expressed FN3784-S Chr4 16144001 16180000 0 0 Deletion 35999 LOC_Os04g27350 retrotransposon protein, putative, LINE subclass FN3784-S Chr4 16144001 16180000 0 0 Deletion 35999 LOC_Os04g27360 retrotransposon protein, putative, unclassified FN3784-S Chr4 16144001 16180000 0 0 Deletion 35999 LOC_Os04g27370 hypothetical protein FN3784-S Chr4 16144001 16180000 0 0 Deletion 35999 LOC_Os04g27380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3784-S Chr4 16146224 16386241 0 0 Inversion 0 LOC_Os04g27320 transposon protein, putative, unclassified FN3784-S Chr4 16179208 16386253 0 0 Inversion 0 FN3784-S Chr4 6273600 A-G 0 0 Single Base Substitution 0 HET FN3784-S Chr5 16721529 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr5 1950951 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr6 21622193 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr6 26036344 C-A 0 0 Single Base Substitution 0 Homo FN3784-S Chr6 2851258 T-C 0 0 Single Base Substitution 0 HET FN3784-S Chr6 30098571 C-T 0 0 Single Base Substitution 0 HET FN3784-S Chr7 22898509 Chr3 14611506 0 Translocation 0 FN3784-S Chr8 16898110 16898110 0 0 Insertion 348 HET FN3784-S Chr8 4105046 4105060 0 0 Deletion 14 HET FN3784-S Chr8 5332778 5332783 0 0 Deletion 5 splice_donor_variant&inframe_deletion&splice_region_variant&intron_variant HET LOC_Os08g09200 aconitate hydratase protein, putative, expressed FN3784-S Chr9 1849624 G-A 0 0 Single Base Substitution 0 HET FN3784-S Chr9 1849626 G-A 0 0 Single Base Substitution 0 HET