FN3808-S Chr1 16852151 16896536 0 0 Inversion 0 FN3808-S Chr1 41043631 41043638 0 0 Deletion 7 Homo FN3808-S Chr1 9055383 G-A 0 0 Single Base Substitution 0 HET FN3808-S Chr10 14054725 14054732 0 0 Deletion 7 HET FN3808-S Chr10 20847724 Chr2 9399095 0 Translocation 0 FN3808-S Chr10 7787221 G-T 0 0 Single Base Substitution 0 HET FN3808-S Chr11 12657038 12657039 0 0 Deletion 1 frameshift_variant HET LOC_Os11g22010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr11 19642388 G-A 0 0 Single Base Substitution 0 Homo FN3808-S Chr12 11388009 Chr7 1638446 0 Translocation 0 LOC_Os07g03910 transporter, major facilitator superfamily domain containing protein, expressed FN3808-S Chr12 11575371 11575371 0 0 Insertion 1 HET FN3808-S Chr12 12737963 12737964 0 0 Deletion 1 frameshift_variant Homo LOC_Os12g22570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr12 17096932 17096932 0 0 Insertion 1 frameshift_variant HET LOC_Os12g28920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr12 20336404 A-T 0 0 Single Base Substitution 0 HET FN3808-S Chr12 22022170 Chr4 15489637 0 Translocation 0 FN3808-S Chr12 4799260 4799261 0 0 Deletion 1 Homo FN3808-S Chr2 12668838 A-G 0 0 Single Base Substitution 0 Homo FN3808-S Chr2 12699432 12699435 0 0 Deletion 3 HET FN3808-S Chr2 15977183 15977192 0 0 Deletion 9 Homo FN3808-S Chr2 31545512 C-T 0 0 Single Base Substitution 0 HET FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07340 HEAT repeat family protein, putative, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07350 inositol-1-monophosphatase, putative, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07360 pentatricopeptide containing protein, putative, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07370 retrotransposon protein, putative, unclassified, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07380 retrotransposon protein, putative, unclassified, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07390 retrotransposon, putative, centromere-specific, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07400 retrotransposon protein, putative, unclassified, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07410 glycine cleavage system H protein, putative, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07420 splicing factor, arginine/serine-rich 12, putative, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07430 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07440 DEFL78 - Defensin and Defensin-like DEFL family, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07450 core histone H2A/H2B/H3/H4, putative, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07460 expressed protein FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07480 transglycosylase SLT domain containing protein, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07490 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07495 expressed protein FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07510 retrotransposon protein, putative, Ty3-gypsy subclass FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr2 3787001 3904000 0 0 Deletion 116999 LOC_Os02g07540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr2 5983996 T-G 0 0 Single Base Substitution 0 HET FN3808-S Chr3 15174038 C-T 0 0 Single Base Substitution 0 Homo FN3808-S Chr3 21295507 21295510 0 0 Deletion 3 Homo FN3808-S Chr3 21807182 21807182 0 0 Insertion 1 frameshift_variant HET LOC_Os03g39250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr3 21981163 21981169 0 0 Deletion 6 inframe_deletion Homo LOC_Os03g39590 retrotransposon protein, putative, unclassified, expressed FN3808-S Chr3 26324003 C-T 0 0 Single Base Substitution 0 HET FN3808-S Chr3 36080001 36091000 0 0 Deletion 10999 LOC_Os03g63870 expressed protein FN3808-S Chr3 36263983 T-G 0 0 Single Base Substitution 0 HET FN3808-S Chr3 6081073 A-T 0 0 Single Base Substitution 0 Homo FN3808-S Chr4 13530947 G-T 0 0 Single Base Substitution 0 Homo FN3808-S Chr4 13530948 C-T 0 0 Single Base Substitution 0 Homo FN3808-S Chr5 15283554 Chr4 10040435 0 Translocation 0 LOC_Os05g26270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3808-S Chr5 6971488 G-T 0 0 Single Base Substitution 0 HET FN3808-S Chr5 6971489 A-T 0 0 Single Base Substitution 0 HET FN3808-S Chr5 7976879 G-C 0 0 Single Base Substitution 0 HET FN3808-S Chr6 14551720 14551720 0 0 Insertion 1 HET FN3808-S Chr6 3148377 3148379 0 0 Deletion 2 Homo FN3808-S Chr6 4482691 T-A 0 0 Single Base Substitution 0 HET FN3808-S Chr7 19702595 G-A 0 0 Single Base Substitution 0 HET FN3808-S Chr7 20453919 T-A 0 0 Single Base Substitution 0 HET FN3808-S Chr7 23070870 Chr3 9825037 0 Translocation 0 LOC_Os03g17660 expressed protein FN3808-S Chr7 23070870 Chr3 9825037 0 Translocation 0 LOC_Os07g38380 transmembrane protein 49, putative, expressed FN3808-S Chr7 23070910 Chr3 9823017 0 Translocation 0 LOC_Os03g17660 expressed protein FN3808-S Chr7 23070910 Chr3 9823017 0 Translocation 0 LOC_Os07g38380 transmembrane protein 49, putative, expressed FN3808-S Chr7 27736627 G-T 0 0 Single Base Substitution 0 HET FN3808-S Chr7 9977855 Chr2 19708342 0 Translocation 0 LOC_Os07g16960 glycosyl transferase, group 1 domain containing protein, expressed FN3808-S Chr8 10249307 10276093 0 0 Inversion 0 LOC_Os08g16760 retrotransposon protein, putative, unclassified, expressed FN3808-S Chr8 10252879 10276099 0 0 Inversion 0 LOC_Os08g16770 transposon protein, putative, unclassified, expressed FN3808-S Chr8 18431140 18431140 0 0 Insertion 1 HET FN3808-S Chr8 23845928 24058598 0 0 Inversion 0 FN3808-S Chr8 24068088 Chr1 7233748 0 Translocation 0 FN3808-S Chr8 27222376 A-G 0 0 Single Base Substitution 0 HET FN3808-S Chr8 3240479 G-C 0 0 Single Base Substitution 0 HET FN3808-S Chr8 4757565 T-C 0 0 Single Base Substitution 0 Homo FN3808-S Chr9 11377152 Chr2 18782 0 Translocation 0 FN3808-S Chr9 11384460 Chr5 16073216 0 Translocation 0 FN3808-S Chr9 11384461 Chr2 18758 0 Translocation 0 FN3808-S Chr9 22157231 22157232 0 0 Deletion 1 frameshift_variant HET LOC_Os09g38510 purine permease, putative, expressed FN3808-S Chr9 5576128 T-C 0 0 Single Base Substitution 0 HET FN3808-S Chr9 5594893 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g10270 SKP1-like protein 1B, putative, expressed