FN3809-S Chr1 12966329 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g23040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3809-S Chr1 14229159 G-A 0 0 Single Base Substitution 0 HET FN3809-S Chr10 11803046 T-C 0 0 Single Base Substitution 0 HET FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12480 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12500 integral membrane protein DUF6 containing protein, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12520 retrotransposon protein, putative, Ty3-gypsy subclass FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12539 transposon protein, putative, CACTA, En/Spm sub-class FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12548 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12560 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12610 expressed protein FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12620 protein kinase domain containing protein, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12640 ligA, putative, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12650 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr10 6936001 7059000 0 0 Deletion 122999 LOC_Os10g12660 retrotransposon protein, putative, unclassified FN3809-S Chr10 7685655 Chr6 5168933 0 Translocation 0 LOC_Os10g14170 expressed protein FN3809-S Chr10 7685655 Chr6 5168933 0 Translocation 0 LOC_Os10g14180 expressed protein FN3809-S Chr10 7971001 7982000 0 0 Deletion 10999 LOC_Os10g15340 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr10 7993001 8028000 0 0 Deletion 34999 LOC_Os10g15250 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr10 7993001 8028000 0 0 Deletion 34999 LOC_Os10g15260 retrotransposon protein, putative, unclassified FN3809-S Chr10 7993001 8028000 0 0 Deletion 34999 LOC_Os10g15270 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr10 7993001 8028000 0 0 Deletion 34999 LOC_Os10g15279 retrotransposon, putative, centromere-specific FN3809-S Chr10 7993001 8028000 0 0 Deletion 34999 LOC_Os10g15290 retrotransposon, putative, centromere-specific, expressed FN3809-S Chr10 7993001 8028000 0 0 Deletion 34999 LOC_Os10g15300 expressed protein FN3809-S Chr10 7993001 8028000 0 0 Deletion 34999 LOC_Os10g15310 expressed protein FN3809-S Chr10 8067001 8088000 0 0 Deletion 20999 LOC_Os10g15160 conserved hypothetical protein FN3809-S Chr10 8067001 8088000 0 0 Deletion 20999 LOC_Os10g15164 expressed protein FN3809-S Chr10 8067001 8088000 0 0 Deletion 20999 LOC_Os10g15170 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr11 14592669 14592670 0 0 Deletion 1 HET FN3809-S Chr11 16230816 16230816 0 0 Insertion 1 HET FN3809-S Chr11 17799441 Chr10 12210640 0 Translocation 0 FN3809-S Chr11 2097945 A-T 0 0 Single Base Substitution 0 Homo FN3809-S Chr11 25217561 G-A 0 0 Single Base Substitution 0 HET FN3809-S Chr12 11544833 Chr2 16788106 0 Translocation 0 LOC_Os02g28400 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr12 19685250 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g32630 OsFBX448 - F-box domain containing protein, expressed FN3809-S Chr12 25235170 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g40760 expressed protein FN3809-S Chr2 13341930 13341931 0 0 Deletion 1 HET FN3809-S Chr2 1941378 G-T 0 0 Single Base Substitution 0 HET FN3809-S Chr3 21543633 C-A 0 0 Single Base Substitution 0 HET FN3809-S Chr3 28272979 C-T 0 0 Single Base Substitution 0 Homo FN3809-S Chr3 32006319 C-T 0 0 Single Base Substitution 0 Homo FN3809-S Chr3 36199618 C-T 0 0 Single Base Substitution 0 Homo FN3809-S Chr4 10738369 A-G 0 0 Single Base Substitution 0 HET FN3809-S Chr4 12370203 Chr2 1489446 0 Translocation 0 FN3809-S Chr4 13036348 Chr3 25422753 0 Translocation 0 LOC_Os03g45040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3809-S Chr4 13036348 Chr3 25422753 0 Translocation 0 LOC_Os04g22970 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr4 2525324 C-A 0 0 Single Base Substitution 0 HET FN3809-S Chr4 2525325 C-T 0 0 Single Base Substitution 0 HET FN3809-S Chr4 25689588 T-C 0 0 Single Base Substitution 0 HET FN3809-S Chr4 3954794 Chr3 1385052 0 Translocation 0 LOC_Os03g03240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3809-S Chr4 4344973 G-C 0 0 Single Base Substitution 0 HET FN3809-S Chr4 5172299 G-T 0 0 Single Base Substitution 0 HET FN3809-S Chr4 9335188 C-T 0 0 Single Base Substitution 0 HET FN3809-S Chr5 11451935 C-T 0 0 Single Base Substitution 0 HET FN3809-S Chr5 14330675 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g24720 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr5 17963397 T-C 0 0 Single Base Substitution 0 HET FN3809-S Chr5 21403205 A-G 0 0 Single Base Substitution 0 HET FN3809-S Chr5 25579463 25579466 0 0 Deletion 3 HET FN3809-S Chr5 26667833 A-G 0 0 Single Base Substitution 0 HET FN3809-S Chr5 3772038 C-T 0 0 Single Base Substitution 0 HET FN3809-S Chr5 5504610 Chr2 13956834 0 Translocation 0 LOC_Os02g24090 retrotransposon protein, putative, unclassified, expressed FN3809-S Chr5 5504610 Chr2 13956834 0 Translocation 0 LOC_Os05g09720 expressed protein FN3809-S Chr5 8369389 G-A 0 0 Single Base Substitution 0 HET FN3809-S Chr6 12865575 C-T 0 0 Single Base Substitution 0 Homo FN3809-S Chr6 13093928 C-T 0 0 Single Base Substitution 0 HET FN3809-S Chr6 14110702 14110729 0 0 Deletion 27 HET FN3809-S Chr6 6501281 T-C 0 0 Single Base Substitution 0 Homo FN3809-S Chr6 7840171 7840179 0 0 Deletion 8 Homo FN3809-S Chr7 12107636 G-A 0 0 Single Base Substitution 0 Homo FN3809-S Chr7 6606875 T-C 0 0 Single Base Substitution 0 HET FN3809-S Chr8 12235559 12235559 0 0 Insertion 4 HET FN3809-S Chr8 19190732 19190733 0 0 Deletion 1 Homo FN3809-S Chr8 9226781 T-A 0 0 Single Base Substitution 0 Homo FN3809-S Chr9 14383516 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g24220 MSH-like DNA mismatch repair protein, putative, expressed FN3809-S Chr9 18079311 18079334 0 0 Deletion 23 frameshift_variant HET LOC_Os09g29730 transposon protein, putative, CACTA, En/Spm sub-class FN3809-S Chr9 3643453 A-G 0 0 Single Base Substitution 0 Homo FN3809-S Chr9 644001 663000 0 0 Deletion 18999 LOC_Os09g01960 MYB family transcription factor, putative, expressed FN3809-S Chr9 6983744 G-A 0 0 Single Base Substitution 0 HET