FN3824-S Chr1 11060249 A-T 0 0 Single Base Substitution 0 Homo FN3824-S Chr1 16235876 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr1 18195946 C-A 0 0 Single Base Substitution 0 HET FN3824-S Chr1 18271027 G-C 0 0 Single Base Substitution 0 HET FN3824-S Chr1 19544647 T-C 0 0 Single Base Substitution 0 HET FN3824-S Chr1 22026491 22026492 0 0 Deletion 1 Homo FN3824-S Chr10 11679870 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr10 15578985 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr10 15824395 T-A 0 0 Single Base Substitution 0 Homo FN3824-S Chr10 17175537 G-T 0 0 Single Base Substitution 0 HET FN3824-S Chr10 20832284 C-T 0 0 Single Base Substitution 0 Homo FN3824-S Chr10 3093323 C-A 0 0 Single Base Substitution 0 HET FN3824-S Chr10 4874256 4874258 0 0 Deletion 2 HET FN3824-S Chr10 6881052 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr11 10561571 Chr10 1626223 0 Translocation 0 LOC_Os10g03660 OsFBX345 - F-box domain containing protein, expressed FN3824-S Chr11 16413272 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr11 22787867 22787867 0 0 Insertion 4 HET FN3824-S Chr11 26931541 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr11 5174432 A-C 0 0 Single Base Substitution 0 HET FN3824-S Chr12 10193750 10193750 0 0 Insertion 1 Homo FN3824-S Chr12 14372910 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g25040 retrotransposon protein, putative, unclassified, expressed FN3824-S Chr12 14571780 C-A 0 0 Single Base Substitution 0 Homo FN3824-S Chr12 16698644 A-G 0 0 Single Base Substitution 0 Homo FN3824-S Chr12 2109097 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr12 21450047 C-G 0 0 Single Base Substitution 0 HET FN3824-S Chr12 25195887 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g40700 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3824-S Chr2 12477412 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr2 13756810 A-T 0 0 Single Base Substitution 0 HET FN3824-S Chr2 17514486 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr2 17622944 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr2 18574163 A-G 0 0 Single Base Substitution 0 HET FN3824-S Chr2 19108548 19108548 0 0 Insertion 1 HET FN3824-S Chr2 536378 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g01960 tetratricopeptide repeat domain containing protein, expressed FN3824-S Chr3 13914461 A-T 0 0 Single Base Substitution 0 HET FN3824-S Chr3 15930660 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr3 20640224 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr3 26217543 26217547 0 0 Deletion 4 HET FN3824-S Chr3 30530688 30530689 0 0 Deletion 1 frameshift_variant HET LOC_Os03g53220 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed FN3824-S Chr3 405553 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr3 6205749 G-T 0 0 Single Base Substitution 0 HET FN3824-S Chr3 6755520 A-G 0 0 Single Base Substitution 0 HET FN3824-S Chr3 8952604 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr4 10825708 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr4 1112852 G-T 0 0 Single Base Substitution 0 HET FN3824-S Chr4 11148033 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr4 12351987 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g21800 retrotransposon protein, putative, LINE subclass FN3824-S Chr4 13047021 13047021 0 0 Insertion 1 HET FN3824-S Chr4 13582309 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr4 14149019 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g24650 retrotransposon protein, putative, unclassified, expressed FN3824-S Chr4 15513777 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g26580 retrotransposon protein, putative, unclassified, expressed FN3824-S Chr4 17676636 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr4 23795433 C-T 0 0 Single Base Substitution 0 Homo FN3824-S Chr4 2519039 C-A 0 0 Single Base Substitution 0 HET FN3824-S Chr4 34699024 Chr2 4094784 0 Translocation 0 FN3824-S Chr4 4082766 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g12980 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g12990 OsFBX122 - F-box domain containing protein, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13000 retrotransposon protein, putative, LINE subclass, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13010 OsFBX123 - F-box domain containing protein, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13040 OsFBX124 - F-box domain containing protein, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13050 expressed protein FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13060 expressed protein FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13070 hypothetical protein FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13080 retrotransposon, putative, centromere-specific, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13090 vignain precursor, putative, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13100 retrotransposon protein, putative, unclassified, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13120 retrotransposon protein, putative, unclassified FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13130 hypothetical protein FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13140 vignain precursor, putative, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13150 OsFBX125 - F-box domain containing protein, expressed FN3824-S Chr4 7164001 7263000 0 0 Deletion 98999 LOC_Os04g13160 OsFBD9 - F-box and FBD domain containing protein, expressed FN3824-S Chr4 7164414 Chr2 4096376 0 Translocation 0 LOC_Os02g07820 DUF581 domain containing protein, expressed FN3824-S Chr4 7164414 Chr2 4096376 0 Translocation 0 LOC_Os04g12980 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed FN3824-S Chr4 8143986 8143986 0 0 Insertion 67 HET FN3824-S Chr4 8391385 C-G 0 0 Single Base Substitution 0 HET FN3824-S Chr5 18772201 C-A 0 0 Single Base Substitution 0 Homo FN3824-S Chr5 22180755 C-A 0 0 Single Base Substitution 0 HET FN3824-S Chr5 2222201 C-A 0 0 Single Base Substitution 0 HET FN3824-S Chr5 4589092 A-G 0 0 Single Base Substitution 0 HET FN3824-S Chr5 6902824 A-G 0 0 Single Base Substitution 0 HET FN3824-S Chr6 27566801 G-T 0 0 Single Base Substitution 0 HET FN3824-S Chr6 30138018 30138036 0 0 Deletion 18 Homo FN3824-S Chr6 5292278 Chr3 21824081 0 Translocation 0 LOC_Os03g39284 retrotransposon protein, putative, unclassified, expressed FN3824-S Chr6 5292278 Chr3 21824081 0 Translocation 0 LOC_Os06g10290 OsFBX191 - F-box domain containing protein, expressed FN3824-S Chr6 5293292 Chr3 21824021 0 Translocation 0 LOC_Os03g39284 retrotransposon protein, putative, unclassified, expressed FN3824-S Chr6 5293292 Chr3 21824021 0 Translocation 0 LOC_Os06g10290 OsFBX191 - F-box domain containing protein, expressed FN3824-S Chr6 8086617 Chr4 18734240 0 Translocation 0 FN3824-S Chr6 8607318 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g15190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3824-S Chr7 2211209 2211220 0 0 Deletion 11 HET FN3824-S Chr7 9710645 T-C 0 0 Single Base Substitution 0 HET FN3824-S Chr8 10967938 10967939 0 0 Deletion 1 Homo FN3824-S Chr8 16310764 G-A 0 0 Single Base Substitution 0 HET FN3824-S Chr8 19225450 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr8 24497099 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g38740 glycosyl transferase 8 domain containing protein, putative, expressed FN3824-S Chr8 26600877 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr8 2978043 2978053 0 0 Deletion 10 frameshift_variant Homo LOC_Os08g05570 monodehydroascorbate reductase, putative, expressed FN3824-S Chr8 3744232 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g06640 stress-induced protein, putative, expressed FN3824-S Chr8 8409283 T-A 0 0 Single Base Substitution 0 HET FN3824-S Chr9 15538225 C-T 0 0 Single Base Substitution 0 HET FN3824-S Chr9 18589896 19053790 0 0 Inversion 0 LOC_Os09g31950 retrotransposon protein, putative, unclassified, expressed FN3824-S Chr9 3508287 3508288 0 0 Deletion 1 HET