FN3840-S Chr1 13113366 13113379 0 0 Deletion 13 HET FN3840-S Chr1 22780511 22780512 0 0 Deletion 1 frameshift_variant HET LOC_Os01g40340 SIT4 phosphatase-associated protein domain containing protein, expressed FN3840-S Chr1 25887051 25887054 0 0 Deletion 3 Homo FN3840-S Chr1 33298247 A-T 0 0 Single Base Substitution 0 HET FN3840-S Chr1 3951643 3951645 0 0 Deletion 2 HET FN3840-S Chr1 5022826 A-G 0 0 Single Base Substitution 0 HET FN3840-S Chr10 12814193 C-T 0 0 Single Base Substitution 0 HET FN3840-S Chr10 13696294 13696306 0 0 Deletion 12 HET FN3840-S Chr10 17575236 G-A 0 0 Single Base Substitution 0 HET FN3840-S Chr10 23167207 G-A 0 0 Single Base Substitution 0 HET FN3840-S Chr10 909832 A-G 0 0 Single Base Substitution 0 HET FN3840-S Chr11 10670001 10687000 0 0 Deletion 16999 LOC_Os11g18800 retrotransposon protein, putative, unclassified FN3840-S Chr11 10670001 10687000 0 0 Deletion 16999 LOC_Os11g18810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3840-S Chr11 10670001 10687000 0 0 Deletion 16999 LOC_Os11g18820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3840-S Chr11 10670070 Chr2 33644942 0 Translocation 0 FN3840-S Chr11 10685247 Chr2 33644832 0 Translocation 0 FN3840-S Chr11 17916117 T-C 0 0 Single Base Substitution 0 HET FN3840-S Chr11 19152751 19152755 0 0 Deletion 4 Homo FN3840-S Chr11 19158733 G-A 0 0 Single Base Substitution 0 Homo FN3840-S Chr11 7667515 7667517 0 0 Deletion 2 Homo FN3840-S Chr12 10016582 10016584 0 0 Deletion 2 HET FN3840-S Chr12 16446401 Chr7 11777249 0 Translocation 0 LOC_Os12g27900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3840-S Chr12 21675794 21675800 0 0 Deletion 6 inframe_deletion HET LOC_Os12g35650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3840-S Chr12 23091325 C-A 0 0 Single Base Substitution 0 HET FN3840-S Chr12 25216877 25216883 0 0 Deletion 6 HET FN3840-S Chr12 27414956 A-C 0 0 Single Base Substitution 0 HET FN3840-S Chr12 7577397 A-G 0 0 Single Base Substitution 0 HET FN3840-S Chr12 8321597 8321600 0 0 Deletion 3 HET FN3840-S Chr2 15434197 C-A 0 0 Single Base Substitution 0 HET FN3840-S Chr2 1773967 A-G 0 0 Single Base Substitution 0 HET FN3840-S Chr2 26055291 26055293 0 0 Deletion 2 HET FN3840-S Chr2 30370446 C-T 0 0 Single Base Substitution 0 HET FN3840-S Chr2 32529580 A-G 0 0 Single Base Substitution 0 HET FN3840-S Chr2 32938577 32938578 0 0 Deletion 1 HET FN3840-S Chr2 33457616 33457622 0 0 Deletion 6 HET FN3840-S Chr2 34439844 A-C 0 0 Single Base Substitution 0 HET FN3840-S Chr2 3792925 3792935 0 0 Deletion 10 frameshift_variant HET LOC_Os02g07350 inositol-1-monophosphatase, putative, expressed FN3840-S Chr2 8412118 8412118 0 0 Insertion 2 HET FN3840-S Chr3 30047816 30294132 0 0 Inversion 0 LOC_Os03g52320 GRF-interacting factor 1, putative, expressed FN3840-S Chr3 30047816 30294132 0 0 Inversion 0 LOC_Os03g52830 FATC domain containing protein, expressed FN3840-S Chr3 30049903 30294131 0 0 Inversion 0 LOC_Os03g52830 FATC domain containing protein, expressed FN3840-S Chr3 30199994 C-G 0 0 Single Base Substitution 0 HET FN3840-S Chr4 15148135 C-T 0 0 Single Base Substitution 0 HET FN3840-S Chr4 23913769 C-T 0 0 Single Base Substitution 0 HET FN3840-S Chr4 26568886 26568890 0 0 Deletion 4 HET FN3840-S Chr4 33334035 33334071 0 0 Deletion 36 Homo FN3840-S Chr4 3750894 3750894 0 0 Insertion 1 HET FN3840-S Chr5 11261750 11261771 0 0 Deletion 21 Homo FN3840-S Chr5 17002212 G-T 0 0 Single Base Substitution 0 HET FN3840-S Chr5 24373217 24373239 0 0 Deletion 22 HET FN3840-S Chr6 15137609 C-T 0 0 Single Base Substitution 0 Homo FN3840-S Chr6 21805108 G-A 0 0 Single Base Substitution 0 HET FN3840-S Chr6 26074492 G-A 0 0 Single Base Substitution 0 HET FN3840-S Chr7 11371284 11371286 0 0 Deletion 2 frameshift_variant HET LOC_Os07g19200 retrotransposon protein, putative, unclassified, expressed FN3840-S Chr7 13202193 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g23410 fatty acid desaturase, putative, expressed FN3840-S Chr7 16325894 A-G 0 0 Single Base Substitution 0 HET FN3840-S Chr7 19633673 19914066 0 0 Inversion 0 LOC_Os07g33310 MATE efflux family protein, putative, expressed FN3840-S Chr7 19633678 19914073 0 0 Inversion 0 LOC_Os07g33310 MATE efflux family protein, putative, expressed FN3840-S Chr7 20235226 G-A 0 0 Single Base Substitution 0 HET FN3840-S Chr7 22455724 Chr5 7557104 0 Translocation 0 FN3840-S Chr7 22455833 Chr2 28233228 0 Translocation 0 FN3840-S Chr7 24716697 G-A 0 0 Single Base Substitution 0 HET FN3840-S Chr7 26528347 26528352 0 0 Deletion 5 frameshift_variant Homo LOC_Os07g44400 POK1, putative, expressed FN3840-S Chr7 26718085 G-T 0 0 Single Base Substitution 0 Homo FN3840-S Chr7 28868512 A-C 0 0 Single Base Substitution 0 Homo FN3840-S Chr7 4236839 C-T 0 0 Single Base Substitution 0 HET FN3840-S Chr7 6104315 G-A 0 0 Single Base Substitution 0 HET FN3840-S Chr7 8404042 C-T 0 0 Single Base Substitution 0 Homo FN3840-S Chr8 12577665 Chr4 2200028 0 Translocation 0 LOC_Os04g04600 retrotransposon protein, putative, Ty3-gypsy subclass FN3840-S Chr8 24856410 24856418 0 0 Deletion 8 HET FN3840-S Chr8 8367975 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g13960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3840-S Chr9 11172061 A-G 0 0 Single Base Substitution 0 HET FN3840-S Chr9 4634170 C-T 0 0 Single Base Substitution 0 HET FN3840-S Chr9 6927768 6927777 0 0 Deletion 9 HET FN3840-S Chr9 946539 Chr2 11941024 0 Translocation 0 LOC_Os02g20270 expressed protein FN3840-S Chr9 949437 Chr2 11941033 0 Translocation 0 LOC_Os02g20270 expressed protein