FN3856-S Chr1 11379529 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g20030 expressed protein FN3856-S Chr1 21420384 21420615 0 0 Inversion 0 LOC_Os01g38229 peptidyl-prolyl isomerase, putative, expressed FN3856-S Chr1 21829693 21829693 0 0 Insertion 67 HET FN3856-S Chr1 23040427 C-T 0 0 Single Base Substitution 0 HET FN3856-S Chr1 29163891 A-G 0 0 Single Base Substitution 0 HET FN3856-S Chr1 30989829 30990125 0 0 Inversion 0 FN3856-S Chr1 32952566 T-A 0 0 Single Base Substitution 0 Homo FN3856-S Chr1 3807514 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g07870 ABC transporter family protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29700 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29710 hypothetical protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29720 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29730 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29740 MBTB55 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29750 MBTB56 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29760 hypothetical protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29790 MBTB57 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29800 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29810 MBTB58 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29820 snRNP protein, putative FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29830 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29840 MBTB59 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29850 MBTB60 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29870 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29880 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29900 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29920 snRNP protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29930 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29940 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29950 speckle-type POZ protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29960 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29970 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g29990 retrotransposon protein, putative, Ty3-gypsy subclass FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30010 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30020 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30040 BTB/POZ domain containing protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30054 ENT domain containing protein, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30070 sodium/calcium exchanger protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30080 xylosyltransferase, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30090 amino acid permease, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30100 3-5 exonuclease family protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30120 laccase-9 precursor, putative FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30130 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30140 laccase-16, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30150 universal stress protein domain containing protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30156 starch synthase, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30162 hsp20/alpha crystallin family protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30170 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30180 hsp20/alpha crystallin family protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30190 BTBP2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30200 SKP1-like protein 1B, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30210 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30220 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30230 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30240 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30250 transposon protein, putative, unclassified, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30260 transposon protein, putative, unclassified, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30270 retrotransposon, putative, centromere-specific, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30280 OsFBX386 - F-box domain containing protein, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30290 GDSL-like lipase/acylhydrolase, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30300 TRM112, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30310 zinc finger, C3HC4 type domain containing protein, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30330 expansin precursor, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30340 expansin precursor, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30350 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30360 MATH domain containing protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30370 RNA recognition motif containing protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30380 cytochrome P450, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30390 cytochrome P450, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30410 cytochrome P450 71D7, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30420 transcription factor Dp, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30430 heavy metal-associated domain containing protein, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30440 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30450 heavy-metal-associated domain-containing protein, putative, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30460 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30480 expressed protein FN3856-S Chr10 15441001 15860000 0 0 Deletion 418999 LOC_Os10g30490 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed FN3856-S Chr10 15446044 16056326 0 0 Inversion 0 LOC_Os10g30826 retrotransposon protein, putative, Ty1-copia subclass FN3856-S Chr10 15453844 Chr1 20018271 0 Translocation 0 LOC_Os10g29720 expressed protein FN3856-S Chr10 15485829 15485831 0 0 Deletion 2 HET FN3856-S Chr10 15863061 16056725 0 0 Inversion 0 LOC_Os10g30826 retrotransposon protein, putative, Ty1-copia subclass FN3856-S Chr10 16050414 Chr7 9781385 0 Translocation 0 LOC_Os07g16660 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr10 21941471 21941473 0 0 Deletion 2 HET FN3856-S Chr10 4607510 Chr9 7511813 0 Translocation 0 LOC_Os09g13010 hypothetical protein FN3856-S Chr11 12290835 12291265 0 0 Inversion 0 FN3856-S Chr11 14753919 Chr6 9352429 0 Translocation 0 FN3856-S Chr11 20218643 G-A 0 0 Single Base Substitution 0 HET FN3856-S Chr11 2097945 A-T 0 0 Single Base Substitution 0 Homo FN3856-S Chr11 22688879 22689204 0 0 Deletion 325 HET FN3856-S Chr11 23825850 23826010 0 0 Inversion 0 FN3856-S Chr11 27274883 A-G 0 0 Single Base Substitution 0 HET FN3856-S Chr11 8121761 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g14460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3856-S Chr12 10179501 C-T 0 0 Single Base Substitution 0 HET FN3856-S Chr12 11217375 A-G 0 0 Single Base Substitution 0 HET FN3856-S Chr12 11668697 T-C 0 0 Single Base Substitution 0 Homo FN3856-S Chr12 11979507 11979661 0 0 Deletion 154 HET FN3856-S Chr12 19270139 T-A 0 0 Single Base Substitution 0 HET FN3856-S Chr12 20291392 20291519 0 0 Inversion 0 LOC_Os12g33600 expressed protein FN3856-S Chr12 20535788 20535978 0 0 Inversion 0 FN3856-S Chr12 2245126 2245301 0 0 Inversion 0 FN3856-S Chr12 22687920 22687920 0 0 Insertion 1 frameshift_variant HET LOC_Os12g37010 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr12 27080746 Chr6 8332724 0 Translocation 0 FN3856-S Chr12 4268389 G-A 0 0 Single Base Substitution 0 HET FN3856-S Chr12 6818020 6818246 0 0 Inversion 0 LOC_Os12g12380 transposon protein, putative, unclassified, expressed FN3856-S Chr12 873065 873067 0 0 Deletion 2 HET FN3856-S Chr2 12540662 C-T 0 0 Single Base Substitution 0 Homo FN3856-S Chr2 2471933 T-A 0 0 Single Base Substitution 0 HET FN3856-S Chr2 31390685 A-G 0 0 Single Base Substitution 0 HET FN3856-S Chr2 32678535 C-T 0 0 Single Base Substitution 0 HET FN3856-S Chr2 33497224 33497589 0 0 Inversion 0 LOC_Os02g54710 expressed protein FN3856-S Chr2 35106023 T-C 0 0 Single Base Substitution 0 HET FN3856-S Chr2 35734030 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g58430 transposon protein, putative, unclassified, expressed FN3856-S Chr2 35759361 35759676 0 0 Inversion 0 LOC_Os02g58480 sucrose synthase, putative, expressed FN3856-S Chr2 7832011 7832129 0 0 Deletion 118 HET FN3856-S Chr2 9518395 9518398 0 0 Deletion 3 Homo FN3856-S Chr3 13106943 13107034 0 0 Deletion 91 HET FN3856-S Chr3 17288197 17288325 0 0 Inversion 0 LOC_Os03g30300 6-phosphogluconolactonase, putative, expressed FN3856-S Chr3 20053998 C-T 0 0 Single Base Substitution 0 HET FN3856-S Chr3 20317775 20318117 0 0 Inversion 0 LOC_Os03g36630 expressed protein FN3856-S Chr3 20756714 T-C 0 0 Single Base Substitution 0 HET FN3856-S Chr3 23019959 23020143 0 0 Inversion 0 FN3856-S Chr3 23829001 23898000 0 0 Deletion 68999 LOC_Os03g42780 zinc finger protein-related, putative, expressed FN3856-S Chr3 23829001 23898000 0 0 Deletion 68999 LOC_Os03g42790 zinc finger protein-related, putative, expressed FN3856-S Chr3 23829001 23898000 0 0 Deletion 68999 LOC_Os03g42799 expressed protein FN3856-S Chr3 23829001 23898000 0 0 Deletion 68999 LOC_Os03g42810 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN3856-S Chr3 23829001 23898000 0 0 Deletion 68999 LOC_Os03g42820 LIM domain-containing protein, putative, expressed FN3856-S Chr3 23829001 23898000 0 0 Deletion 68999 LOC_Os03g42830 MATE efflux family protein, putative, expressed FN3856-S Chr3 23829001 23898000 0 0 Deletion 68999 LOC_Os03g42840 calcineurin B, putative, expressed FN3856-S Chr3 27460500 A-T 0 0 Single Base Substitution 0 Homo FN3856-S Chr3 33510828 A-G 0 0 Single Base Substitution 0 HET FN3856-S Chr3 35006154 C-T 0 0 Single Base Substitution 0 HET FN3856-S Chr3 5982840 5982955 0 0 Inversion 0 LOC_Os03g11540 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed FN3856-S Chr3 7993910 7993916 0 0 Deletion 6 disruptive_inframe_deletion HET LOC_Os03g14700 C2 domain containing protein, expressed FN3856-S Chr3 9954000 9954197 0 0 Inversion 0 LOC_Os03g17860 OsPDIL5-1 protein disulfide isomerase PDIL5-1, expressed FN3856-S Chr4 11659160 11659385 0 0 Inversion 0 LOC_Os04g20774 pumilio-family RNA binding repeat containing protein, expressed FN3856-S Chr4 1213471 G-A 0 0 Single Base Substitution 0 HET FN3856-S Chr4 16189774 C-T 0 0 Single Base Substitution 0 HET FN3856-S Chr4 19218365 C-T 0 0 Single Base Substitution 0 HET FN3856-S Chr4 2571328 2571330 0 0 Deletion 2 frameshift_variant HET LOC_Os04g05160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3856-S Chr4 8619934 C-T 0 0 Single Base Substitution 0 HET FN3856-S Chr5 1472128 1472410 0 0 Inversion 0 LOC_Os05g03480 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed FN3856-S Chr5 15399650 15399658 0 0 Deletion 8 HET FN3856-S Chr5 15734390 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g27060 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr5 16961978 Chr2 2674027 0 Translocation 0 FN3856-S Chr5 17164999 C-A 0 0 Single Base Substitution 0 Homo FN3856-S Chr5 194174 194174 0 0 Insertion 4 HET FN3856-S Chr5 21391219 21391532 0 0 Inversion 0 LOC_Os05g36090 zinc finger DHHC domain-containing protein, putative, expressed FN3856-S Chr5 24580767 C-T 0 0 Single Base Substitution 0 Homo FN3856-S Chr5 27138634 27138831 0 0 Inversion 0 FN3856-S Chr5 9902966 A-G 0 0 Single Base Substitution 0 HET FN3856-S Chr6 22384700 22384764 0 0 Deletion 64 HET FN3856-S Chr6 30445662 Chr1 41392692 0 Translocation 0 LOC_Os06g50300 heat shock protein, putative, expressed FN3856-S Chr6 4756530 4756532 0 0 Deletion 2 Homo FN3856-S Chr6 8962767 G-A 0 0 Single Base Substitution 0 HET FN3856-S Chr7 15729883 15730249 0 0 Inversion 0 LOC_Os07g27120 expressed protein FN3856-S Chr7 21477234 21477673 0 0 Inversion 0 FN3856-S Chr7 22711678 22711686 0 0 Deletion 8 HET FN3856-S Chr7 25800684 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g43060 transcription elongation factor SPT4 homolog 1, putative, expressed FN3856-S Chr7 4683451 4683455 0 0 Deletion 4 HET FN3856-S Chr8 12797072 12797284 0 0 Inversion 0 FN3856-S Chr8 16322024 16322296 0 0 Inversion 0 LOC_Os08g26840 plant protein of unknown function domain containing protein, expressed FN3856-S Chr8 17760231 G-A 0 0 Single Base Substitution 0 HET FN3856-S Chr8 19088777 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g30910 YDG/SRA domain containing protein, expressed FN3856-S Chr8 2132607 2132608 0 0 Deletion 1 Homo FN3856-S Chr8 24775024 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g39220 OsWAK75 - OsWAK receptor-like protein kinase, expressed FN3856-S Chr8 25201349 25201601 0 0 Inversion 0 LOC_Os08g39810 retrotransposon protein, putative, unclassified, expressed FN3856-S Chr8 4046517 4046883 0 0 Inversion 0 FN3856-S Chr8 8519497 A-C 0 0 Single Base Substitution 0 HET FN3856-S Chr9 12388157 12388501 0 0 Inversion 0 FN3856-S Chr9 13666408 A-G 0 0 Single Base Substitution 0 HET FN3856-S Chr9 22849588 T-C 0 0 Single Base Substitution 0 HET FN3856-S Chr9 22851547 G-T 0 0 Single Base Substitution 0 HET FN3856-S Chr9 2440769 2440771 0 0 Deletion 2 HET FN3856-S Chr9 805729 805913 0 0 Inversion 0 LOC_Os09g02130 expressed protein FN3856-S Chr9 8114346 Chr6 23491898 0 Translocation 0 FN3856-S Chr9 8294683 Chr2 16818162 0 Translocation 0