FN3860-S Chr1 25426256 A-G 0 0 Single Base Substitution 0 HET FN3860-S Chr1 30669104 C-T 0 0 Single Base Substitution 0 HET FN3860-S Chr1 6098068 C-T 0 0 Single Base Substitution 0 HET FN3860-S Chr10 11753752 A-T 0 0 Single Base Substitution 0 HET FN3860-S Chr10 13514 G-T 0 0 Single Base Substitution 0 HET FN3860-S Chr10 2191198 Chr8 18216283 0 Translocation 0 FN3860-S Chr11 10315013 10315028 0 0 Deletion 15 Homo FN3860-S Chr11 1097001 1149000 0 0 Deletion 51999 LOC_Os11g03090 retrotransposon protein, putative, unclassified, expressed FN3860-S Chr11 1097001 1149000 0 0 Deletion 51999 LOC_Os11g03100 retrotransposon protein, putative, unclassified, expressed FN3860-S Chr11 1097001 1149000 0 0 Deletion 51999 LOC_Os11g03110 GRAS family transcription factor domain containing protein, expressed FN3860-S Chr11 1097001 1149000 0 0 Deletion 51999 LOC_Os11g03120 hypothetical protein FN3860-S Chr11 1097001 1149000 0 0 Deletion 51999 LOC_Os11g03130 E2F-related protein, putative, expressed FN3860-S Chr11 1097001 1149000 0 0 Deletion 51999 LOC_Os11g03140 expressed protein FN3860-S Chr11 1097001 1149000 0 0 Deletion 51999 LOC_Os11g03150 retrotransposon protein, putative, SINE subclass, expressed FN3860-S Chr11 1097001 1149000 0 0 Deletion 51999 LOC_Os11g03160 glycosyl transferase, family 8, putative, expressed FN3860-S Chr11 12685421 C-A 0 0 Single Base Substitution 0 HET FN3860-S Chr11 1882135 1882138 0 0 Deletion 3 HET FN3860-S Chr11 22184103 22184118 0 0 Deletion 15 Homo FN3860-S Chr12 1317994 C-T 0 0 Single Base Substitution 0 Homo FN3860-S Chr12 26303622 G-A 0 0 Single Base Substitution 0 Homo FN3860-S Chr2 16851781 T-C 0 0 Single Base Substitution 0 Homo FN3860-S Chr2 21516092 21516103 0 0 Deletion 11 Homo FN3860-S Chr2 2790604 G-A 0 0 Single Base Substitution 0 HET FN3860-S Chr2 3959736 T-A 0 0 Single Base Substitution 0 Homo FN3860-S Chr2 6193169 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g11940 sterol glucosyltransferase, putative, expressed FN3860-S Chr3 14143433 G-A 0 0 Single Base Substitution 0 HET FN3860-S Chr3 15780243 15780243 0 0 Insertion 2 Homo FN3860-S Chr3 16321309 G-A 0 0 Single Base Substitution 0 HET FN3860-S Chr3 20237594 20237598 0 0 Deletion 4 Homo FN3860-S Chr3 21718601 C-T 0 0 Single Base Substitution 0 HET FN3860-S Chr3 614294 614296 0 0 Deletion 2 HET FN3860-S Chr4 1504977 T-C 0 0 Single Base Substitution 0 HET FN3860-S Chr4 2215589 2215592 0 0 Deletion 3 HET FN3860-S Chr4 2253845 2274176 0 0 Inversion 0 LOC_Os04g04680 expressed protein FN3860-S Chr4 2253845 2274176 0 0 Inversion 0 LOC_Os04g04730 retrotransposon protein, putative, unclassified, expressed FN3860-S Chr4 29716973 30455776 0 0 Inversion 0 LOC_Os04g49850 expressed protein FN3860-S Chr4 30751417 30751418 0 0 Deletion 1 frameshift_variant HET LOC_Os04g51860 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3860-S Chr4 5020013 C-T 0 0 Single Base Substitution 0 HET FN3860-S Chr5 11788524 C-A 0 0 Single Base Substitution 0 Homo FN3860-S Chr5 11788525 C-A 0 0 Single Base Substitution 0 Homo FN3860-S Chr5 14110293 14110297 0 0 Deletion 4 Homo FN3860-S Chr5 20094782 A-C 0 0 Single Base Substitution 0 HET FN3860-S Chr5 21302619 21302639 0 0 Deletion 20 HET FN3860-S Chr5 3906050 3906054 0 0 Deletion 4 frameshift_variant HET LOC_Os05g07340 retrotransposon protein, putative, unclassified, expressed FN3860-S Chr5 4791748 G-C 0 0 Single Base Substitution 0 HET FN3860-S Chr5 7001557 A-T 0 0 Single Base Substitution 0 HET FN3860-S Chr6 25511500 Chr2 12993064 0 Translocation 0 FN3860-S Chr6 642603 A-T 0 0 Single Base Substitution 0 HET FN3860-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16950 expressed protein FN3860-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16960 O-methyltransferase, putative, expressed FN3860-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16970 hypothetical protein FN3860-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16980 DNA topoisomerase I family protein, expressed FN3860-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16990 expressed protein FN3860-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g17000 BURP domain containing protein, expressed FN3860-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g17020 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed FN3860-S Chr7 14356422 Chr6 14832856 0 Translocation 0 LOC_Os06g25320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3860-S Chr7 14356422 Chr6 14832856 0 Translocation 0 LOC_Os07g25130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3860-S Chr7 1490345 1490345 0 0 Insertion 5 HET FN3860-S Chr7 21509071 Chr3 4598302 0 Translocation 0 FN3860-S Chr7 21509081 Chr3 4598314 0 Translocation 0 FN3860-S Chr7 26790530 26790532 0 0 Deletion 2 HET FN3860-S Chr8 15678044 Chr4 2253847 0 Translocation 0 LOC_Os04g04680 expressed protein FN3860-S Chr8 15678044 Chr4 2253847 0 Translocation 0 LOC_Os08g25750 retrotransposon protein, putative, unclassified, expressed FN3860-S Chr8 20134538 Chr1 2999922 0 Translocation 0 LOC_Os01g06310 glycine-rich cell wall structural protein precursor, putative, expressed FN3860-S Chr8 5427546 T-C 0 0 Single Base Substitution 0 HET FN3860-S Chr8 5820615 G-T 0 0 Single Base Substitution 0 HET FN3860-S Chr8 7655442 C-T 0 0 Single Base Substitution 0 HET FN3860-S Chr9 21869950 21869960 0 0 Deletion 10 HET FN3860-S Chr9 4264191 C-T 0 0 Single Base Substitution 0 HET FN3860-S Chr9 4285455 T-C 0 0 Single Base Substitution 0 HET