FN389-S Chr1 10361144 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr1 24757078 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN389-S Chr1 25219404 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN389-S Chr1 27172883 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN389-S Chr1 3587779 3587785 0 0 Deletion 6 LOC_Os01g07510 conserved hypothetical protein FN389-S Chr1 39532503 39578748 0 0 Deletion 46245 LOC_Os01g68010 TBC domain containing protein, expressed FN389-S Chr1 39532503 39578748 0 0 Deletion 46245 LOC_Os01g68020 BTBZ2 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed FN389-S Chr1 39532503 39578748 0 0 Deletion 46245 LOC_Os01g68030 expressed protein FN389-S Chr1 39532503 39578748 0 0 Deletion 46245 LOC_Os01g68040 CorA-like magnesium transporter protein, putative, expressed FN389-S Chr1 39532503 39578748 0 0 Deletion 46245 LOC_Os01g68050 transmembrane amino acid transporter protein, putative, expressed FN389-S Chr1 39532503 39578748 0 0 Deletion 46245 LOC_Os01g68060 copine, putative, expressed FN389-S Chr1 39532503 39578748 0 0 Deletion 46245 LOC_Os01g68070 PPR repeat containing protein, expressed FN389-S Chr1 41083517 41083528 0 0 Deletion 11 FN389-S Chr1 5990995 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g11170 expressed protein FN389-S Chr10 11892183 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr11 10974020 A-G 0 0 Single Base Substitution 0 INTRON HET FN389-S Chr11 17199702 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr11 18487241 18487265 0 0 Deletion 24 FN389-S Chr11 18916858 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr11 1963973 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g04620 retrotransposon protein, putative, unclassified, expressed FN389-S Chr11 20774747 20774747 0 0 Insertion 6 FN389-S Chr11 22578430 Chr8 3761938 0 Translocation 0 LOC_Os11g38070 expressed protein FN389-S Chr11 3394885 3680217 0 0 Inversion 285332 LOC_Os11g06910 myosin heavy chain-related, putative, expressed FN389-S Chr11 4963855 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr11 5152576 Chr2 29247130 0 Translocation 0 FN389-S Chr11 5154876 Chr2 29247094 0 Translocation 0 LOC_Os11g09640 OsFBX408 - F-box domain containing protein, expressed FN389-S Chr11 5600949 5600956 0 0 Deletion 7 LOC_Os11g10310 receptor-like protein kinase 2 precursor, putative, expressed FN389-S Chr11 5832180 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN389-S Chr11 6159728 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr11 8764239 8764239 0 0 Insertion 2 FN389-S Chr11 9781411 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr12 11733740 C-T 0 0 Single Base Substitution 0 INTRON HET FN389-S Chr12 14673412 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr12 16096555 T-C 0 0 Single Base Substitution 0 INTRON HET FN389-S Chr12 23551114 23551114 0 0 Insertion 2 FN389-S Chr12 24431615 24431617 0 0 Deletion 2 FN389-S Chr12 25783823 25783833 0 0 Deletion 10 FN389-S Chr12 9181290 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g16080 expressed protein FN389-S Chr12 9734314 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN389-S Chr12 9736485 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr2 11458650 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os02g19620 retrotransposon protein, putative, unclassified, expressed FN389-S Chr2 27699691 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g45520 uncharacterized membrane protein, putative, expressed FN389-S Chr2 29247359 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr2 29764063 29764066 0 0 Deletion 3 LOC_Os02g48620 tetratricopeptide repeat, putative, expressed FN389-S Chr2 3885992 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr3 11859842 11859847 0 0 Deletion 5 FN389-S Chr3 22401245 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr3 28970912 C-G 0 0 Single Base Substitution 0 INTRON HET FN389-S Chr3 30386058 30386059 0 0 Deletion 1 LOC_Os03g52970 deoxyhypusine synthase, putative, expressed FN389-S Chr3 31340650 31340666 0 0 Deletion 16 FN389-S Chr3 31342394 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr3 32249801 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN389-S Chr4 12115406 12115413 0 0 Deletion 7 FN389-S Chr4 13064750 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN389-S Chr4 13428363 13428371 0 0 Deletion 8 FN389-S Chr4 18655962 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN389-S Chr4 31533820 T-A 0 0 Single Base Substitution 0 INTRON HET FN389-S Chr4 3502046 3502048 0 0 Deletion 2 FN389-S Chr4 522203 522205 0 0 Deletion 2 LOC_Os04g01810 terpene synthase, putative, expressed FN389-S Chr5 10137944 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr5 14264899 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr5 15001822 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26480 PROLM12 - Prolamin precursor, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26490 PROLM13 - Prolamin precursor, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26520 transposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26530 retrotransposon protein, putative, Ty3-gypsy subclass FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26540 retrotransposon protein, putative, unclassified FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26550 retrotransposon protein, putative, unclassified FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26560 retrotransposon protein, putative, Ty3-gypsy subclass FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26564 retrotransposon protein, putative, Ty3-gypsy subclass FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26570 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26580 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26590 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26610 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26620 PROLM14 - Prolamin precursor, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26630 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26640 retrotransposon protein, putative, unclassified FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26660 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26670 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26680 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26690 PROLM15 - Prolamin precursor, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26700 hypothetical protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26710 retrotransposon protein, putative, unclassified FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26720 PROLM16 - Prolamin precursor, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26730 retrotransposon protein, putative, LINE subclass, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26740 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26750 PROLM17 - Prolamin precursor, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26760 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26770 PROLM18 - Prolamin precursor, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26780 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26790 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26800 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26820 CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26830 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26840 permease domain containing protein, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26850 hypothetical protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26860 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26870 CAMK_KIN1/SNF1/Nim1_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26890 G-protein alpha subunit, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26902 chaperone protein dnaJ, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26926 chaperone protein dnaJ, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26940 CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26954 saposin-like type B, region 1 family protein, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26970 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26980 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g26990 phospholipid-transporting ATPase 2, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27000 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27010 peptide transporter PTR3-A, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27020 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27034 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27050 peptide transporter, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27060 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27080 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27090 basic helix-loop-helix domain containing protein, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27100 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27110 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27120 DUF640 domain containing protein, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27130 transposon protein, putative, CACTA, En/Spm sub-class FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27140 transposon protein, putative, CACTA, En/Spm sub-class FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27160 hypothetical protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27170 retrotransposon, putative, centromere-specific, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27180 ligA, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27190 retrotransposon protein, putative, unclassified FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27200 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27220 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27230 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27240 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27250 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27260 retrotransposon protein, putative, unclassified FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27270 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27280 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27290 retrotransposon, putative, centromere-specific FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27304 peptide transporter PTR2, putative, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27320 VHS and GAT domain containing protein, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27340 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27350 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27360 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27370 expressed protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27380 hypothetical protein FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27390 retrotransposon protein, putative, unclassified FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27400 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 15387001 15937000 0 0 Deletion 550000 LOC_Os05g27410 retrotransposon protein, putative, unclassified, expressed FN389-S Chr5 16119546 16119567 0 0 Deletion 21 FN389-S Chr5 16345770 16345783 0 0 Deletion 13 FN389-S Chr5 186912 186917 0 0 Deletion 5 LOC_Os05g01270 peptidyl-prolyl cis-trans isomerase, putative, expressed FN389-S Chr5 22476965 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr5 28043579 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr5 9890937 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr6 14204088 14204095 0 0 Deletion 7 FN389-S Chr6 14231947 14231955 0 0 Deletion 8 FN389-S Chr6 17186426 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN389-S Chr6 24531836 24531837 0 0 Deletion 1 LOC_Os06g41070 cytochrome P450, putative, expressed FN389-S Chr6 25007543 25007543 0 0 Insertion 2 FN389-S Chr6 30319125 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN389-S Chr6 3696772 3696772 0 0 Insertion 2 FN389-S Chr7 10490348 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr7 547547 547549 0 0 Deletion 2 FN389-S Chr8 25614988 G-T 0 0 Single Base Substitution 0 INTRON HET FN389-S Chr8 5862173 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr8 5862175 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN389-S Chr9 22615814 22615815 0 0 Deletion 1 FN389-S Chr9 7241057 G-T 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os09g12650 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed