FN3902-S Chr1 12387764 12387769 0 0 Deletion 5 HET FN3902-S Chr1 12931417 12931417 0 0 Insertion 2 HET FN3902-S Chr1 18116997 18117007 0 0 Deletion 10 frameshift_variant HET LOC_Os01g32990 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3902-S Chr1 18133783 18133783 0 0 Insertion 1 Homo FN3902-S Chr1 20602131 20602133 0 0 Deletion 2 frameshift_variant Homo LOC_Os01g36950 N-rich protein, putative, expressed FN3902-S Chr1 26513128 C-A 0 0 Single Base Substitution 0 HET FN3902-S Chr1 3026804 T-C 0 0 Single Base Substitution 0 HET FN3902-S Chr1 37185027 37185370 0 0 Inversion 0 LOC_Os01g64020 transcription factor, putative, expressed FN3902-S Chr1 38878551 T-A 0 0 Single Base Substitution 0 HET FN3902-S Chr1 3905569 T-A 0 0 Single Base Substitution 0 Homo FN3902-S Chr1 39389213 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g67770 two-component response regulator, putative, expressed FN3902-S Chr10 16399902 C-T 0 0 Single Base Substitution 0 Homo FN3902-S Chr10 16399903 C-T 0 0 Single Base Substitution 0 Homo FN3902-S Chr10 17323126 Chr1 23664817 0 Translocation 0 FN3902-S Chr10 4377265 4377269 0 0 Deletion 4 frameshift_variant Homo LOC_Os10g08080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3902-S Chr11 10483476 C-G 0 0 Single Base Substitution 0 HET FN3902-S Chr11 15730248 C-T 0 0 Single Base Substitution 0 HET FN3902-S Chr11 3873423 3873426 0 0 Deletion 3 Homo FN3902-S Chr12 24332919 Chr3 20216542 0 Translocation 0 FN3902-S Chr12 2680001 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g05810 syntaxin-18, putative, expressed FN3902-S Chr12 2680002 T-A 0 0 Single Base Substitution 0 Homo FN3902-S Chr12 4505540 T-C 0 0 Single Base Substitution 0 Homo FN3902-S Chr12 4785637 T-C 0 0 Single Base Substitution 0 HET FN3902-S Chr12 7661168 7661172 0 0 Deletion 4 HET FN3902-S Chr12 8581098 A-T 0 0 Single Base Substitution 0 Homo FN3902-S Chr2 23890229 C-T 0 0 Single Base Substitution 0 HET FN3902-S Chr2 25068361 C-G 0 0 Single Base Substitution 0 HET FN3902-S Chr2 26872551 26872554 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os02g44380 WD domain containing protein, putative, expressed FN3902-S Chr2 30033062 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g49110 retrotransposon protein, putative, unclassified, expressed FN3902-S Chr2 31459376 G-A 0 0 Single Base Substitution 0 HET FN3902-S Chr2 32216566 32216571 0 0 Deletion 5 HET FN3902-S Chr2 5001701 T-A 0 0 Single Base Substitution 0 HET FN3902-S Chr2 7648414 A-C 0 0 Single Base Substitution 0 HET FN3902-S Chr3 27645383 27645384 0 0 Deletion 1 Homo FN3902-S Chr3 28405802 28405803 0 0 Deletion 1 HET FN3902-S Chr3 698138 C-T 0 0 Single Base Substitution 0 HET FN3902-S Chr4 13392001 13414000 0 0 Deletion 21999 LOC_Os04g23440 helix-loop-helix DNA-binding domain containing protein, expressed FN3902-S Chr4 13392001 13414000 0 0 Deletion 21999 LOC_Os04g23460 expressed protein FN3902-S Chr4 14088902 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g24550 ATP-binding region, ATPase-like domain containing protein, expressed FN3902-S Chr4 22330955 22330957 0 0 Deletion 2 frameshift_variant Homo LOC_Os04g37500 glutamate decarboxylase, putative, expressed FN3902-S Chr4 28786005 Chr3 15786019 0 Translocation 0 FN3902-S Chr4 28786015 Chr3 15777973 0 Translocation 0 FN3902-S Chr4 29884868 A-G 0 0 Single Base Substitution 0 Homo FN3902-S Chr4 480831 480831 0 0 Insertion 1 HET FN3902-S Chr4 6809689 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g12340 retrotransposon protein, putative, Ty3-gypsy subclass FN3902-S Chr4 8058534 A-G 0 0 Single Base Substitution 0 HET FN3902-S Chr5 15456420 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g26600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3902-S Chr5 24806373 25614576 0 0 Inversion 0 FN3902-S Chr5 24806385 25614577 0 0 Inversion 0 FN3902-S Chr5 25128559 C-T 0 0 Single Base Substitution 0 HET FN3902-S Chr5 25261430 25261439 0 0 Deletion 9 inframe_deletion HET LOC_Os05g43450 transcription initiation factor IIF beta subunit, putative, expressed FN3902-S Chr5 6248957 G-A 0 0 Single Base Substitution 0 Homo FN3902-S Chr6 14270898 C-T 0 0 Single Base Substitution 0 HET FN3902-S Chr6 16046926 16046926 0 0 Insertion 10 HET FN3902-S Chr6 19965552 G-A 0 0 Single Base Substitution 0 Homo FN3902-S Chr6 21622287 21622315 0 0 Deletion 28 Homo FN3902-S Chr6 21756477 T-C 0 0 Single Base Substitution 0 Homo FN3902-S Chr7 16435439 16435441 0 0 Deletion 2 Homo FN3902-S Chr7 18011209 G-T 0 0 Single Base Substitution 0 HET FN3902-S Chr7 19711841 T-G 0 0 Single Base Substitution 0 HET FN3902-S Chr7 21668739 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g36250 peptide chain release factor protein, putative, expressed FN3902-S Chr7 25354158 G-A 0 0 Single Base Substitution 0 HET FN3902-S Chr7 29097753 T-C 0 0 Single Base Substitution 0 HET FN3902-S Chr7 3819081 G-T 0 0 Single Base Substitution 0 HET FN3902-S Chr8 12784043 12784048 0 0 Deletion 5 HET FN3902-S Chr8 12822436 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g21520 retrotransposon protein, putative, unclassified FN3902-S Chr8 14990062 T-A 0 0 Single Base Substitution 0 Homo FN3902-S Chr8 17195254 A-T 0 0 Single Base Substitution 0 HET FN3902-S Chr8 17766882 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g29020 wall-associated kinase-like 2, putative, expressed FN3902-S Chr8 23056907 A-T 0 0 Single Base Substitution 0 HET FN3902-S Chr8 26903809 A-T 0 0 Single Base Substitution 0 HET FN3902-S Chr8 28167050 G-A 0 0 Single Base Substitution 0 Homo FN3902-S Chr8 4306960 Chr6 25086676 0 Translocation 0 FN3902-S Chr8 8130054 8130056 0 0 Deletion 2 HET FN3902-S Chr9 17959141 C-T 0 0 Single Base Substitution 0 HET FN3902-S Chr9 18575219 G-C 0 0 Single Base Substitution 0 HET FN3902-S Chr9 22800631 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g39750 domain of unknown function DUF966 domain containing protein, expressed FN3902-S Chr9 3750834 G-T 0 0 Single Base Substitution 0 Homo FN3902-S Chr9 9928089 G-A 0 0 Single Base Substitution 0 Homo