FN3918-S Chr1 14958815 G-A 0 0 Single Base Substitution 0 HET FN3918-S Chr1 14977561 G-T 0 0 Single Base Substitution 0 HET FN3918-S Chr1 16182323 G-A 0 0 Single Base Substitution 0 HET FN3918-S Chr1 17067205 A-G 0 0 Single Base Substitution 0 HET FN3918-S Chr1 3222683 3222684 0 0 Deletion 1 frameshift_variant HET LOC_Os01g06790 disease resistance protein, putative, expressed FN3918-S Chr1 40122373 40122379 0 0 Deletion 6 Homo FN3918-S Chr1 7578187 T-C 0 0 Single Base Substitution 0 Homo FN3918-S Chr11 17931153 C-T 0 0 Single Base Substitution 0 HET FN3918-S Chr11 7073666 Chr7 17406846 0 Translocation 0 LOC_Os07g29610 PQ loop repeat domain containing protein, expressed FN3918-S Chr11 7073666 Chr7 17406846 0 Translocation 0 LOC_Os11g12590 expressed protein FN3918-S Chr12 10516472 Chr2 29857006 0 Translocation 0 FN3918-S Chr12 10517647 Chr2 29856886 0 Translocation 0 FN3918-S Chr12 21027567 T-A 0 0 Single Base Substitution 0 Homo FN3918-S Chr12 2324001 C-T 0 0 Single Base Substitution 0 Homo FN3918-S Chr12 2660187 2660194 0 0 Deletion 7 frameshift_variant HET LOC_Os12g05770 expressed protein FN3918-S Chr12 770015 770015 0 0 Insertion 2 HET FN3918-S Chr2 11547014 Chr1 38746611 0 Translocation 0 LOC_Os02g19730 retrotransposon protein, putative, unclassified, expressed FN3918-S Chr2 29857463 A-T 0 0 Single Base Substitution 0 HET FN3918-S Chr2 30621811 T-C 0 0 Single Base Substitution 0 Homo FN3918-S Chr3 15843694 T-G 0 0 Single Base Substitution 0 HET FN3918-S Chr3 27947795 C-T 0 0 Single Base Substitution 0 Homo FN3918-S Chr3 31150166 31150166 0 0 Insertion 4 HET FN3918-S Chr3 4015351 G-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os03g07890 mitochondrial carrier protein, putative, expressed FN3918-S Chr3 9108693 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g16530 retrotransposon protein, putative, unclassified, expressed FN3918-S Chr3 9468474 9468481 0 0 Deletion 7 Homo FN3918-S Chr4 1091573 1091590 0 0 Deletion 17 Homo FN3918-S Chr4 20728276 Chr1 1970546 0 Translocation 0 FN3918-S Chr4 24617791 25048228 0 0 Inversion 0 LOC_Os04g41510 serine/threonine-protein kinase GCN2, putative, expressed FN3918-S Chr4 24617795 25048234 0 0 Inversion 0 LOC_Os04g41510 serine/threonine-protein kinase GCN2, putative, expressed FN3918-S Chr4 2872949 2873059 0 0 Deletion 110 HET FN3918-S Chr4 4883844 4883849 0 0 Deletion 5 frameshift_variant Homo LOC_Os04g08832 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3918-S Chr4 5406611 5406612 0 0 Deletion 1 HET FN3918-S Chr5 19291806 Chr2 17063945 0 Translocation 0 FN3918-S Chr5 2682603 A-G 0 0 Single Base Substitution 0 HET FN3918-S Chr6 14475803 14475817 0 0 Deletion 14 HET FN3918-S Chr6 24686047 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g41250 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43910 two-component response regulator, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43920 hypothetical protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43930 OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43940 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43950 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43960 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43970 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43980 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g43990 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44000 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44010 WRKY28, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44020 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44030 WD domain, G-beta repeat domain containing protein, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44034 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44040 DOMON domain containing protein, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44050 methyladenine glycosylase, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44060 phospholipase D. Active site motif family protein, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44070 retrotransposon protein, putative, unclassified, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44080 ubiquitin family protein, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44090 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44100 HLS, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44120 retrotransposon protein, putative, Ty3-gypsy subclass FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44130 retrotransposon protein, putative, unclassified FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44140 transmembrane 9 superfamily member, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44150 CorA-like magnesium transporter protein, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44160 heat shock protein DnaJ, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44170 NAD dependent epimerase/dehydratase family protein, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44180 NAD dependent epimerase/dehydratase family protein, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44190 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44200 ZOS6-06 - C2H2 zinc finger protein, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44210 protein phosphatase 2C, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44220 OsRCI2-9 - Putative low temperature and salt responsive protein, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44230 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44240 gp176, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44250 haemolysin-III, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44260 synthase, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44270 synthase, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44275 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44290 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44300 WAX2, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44310 tetraspanin family protein, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44320 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44330 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44340 retrotransposon protein, putative, unclassified FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44350 hypothetical protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44360 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44370 WD domain, G-beta repeat domain containing protein, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44374 protein transport protein SEC61 subunit gamma, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44380 ubiquitin carboxyl-terminal hydrolase family protein, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44390 expressed protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44400 hypothetical protein FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44410 histidine kinase, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44420 GDU1, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44430 protein kinase, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44440 retrotransposon protein, putative, unclassified FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44450 CCT/B-box zinc finger protein, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44460 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed FN3918-S Chr6 26448001 26862000 0 0 Deletion 413999 LOC_Os06g44470 pollen allergen, putative, expressed FN3918-S Chr6 26448900 27206109 0 0 Inversion 0 FN3918-S Chr6 26871001 26914000 0 0 Deletion 42999 LOC_Os06g44490 expressed protein FN3918-S Chr6 26871001 26914000 0 0 Deletion 42999 LOC_Os06g44500 OsFBK17 - F-box domain and kelch repeat containing protein, expressed FN3918-S Chr6 26871001 26914000 0 0 Deletion 42999 LOC_Os06g44510 hypothetical protein FN3918-S Chr6 26871001 26914000 0 0 Deletion 42999 LOC_Os06g44530 retrotransposon protein, putative, unclassified FN3918-S Chr6 26871001 26914000 0 0 Deletion 42999 LOC_Os06g44540 HOTHEAD precursor, putative, expressed FN3918-S Chr6 26871001 26914000 0 0 Deletion 42999 LOC_Os06g44550 expressed protein FN3918-S Chr6 26871001 26914000 0 0 Deletion 42999 LOC_Os06g44560 retrotransposon protein, putative, unclassified FN3918-S Chr6 27170611 27275665 0 0 Inversion 0 LOC_Os06g45100 FAD binding domain of DNA photolyase domain containing protein, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g44970 auxin efflux carrier component, putative, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g44980 expressed protein FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g44990 transposon protein, putative, Pong sub-class FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45000 ubiquitin-conjugating enzyme, putative, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45010 expressed protein FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45020 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45030 transposon protein, putative, unclassified, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45040 B-box zinc finger family protein, putative, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45050 clathrin assembly protein, putative, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45060 expressed protein FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45070 diphthamide biosynthesis protein 3, putative, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45080 rabGAP/TBC domain-containing protein, putative, expressed FN3918-S Chr6 27204001 27274000 0 0 Deletion 69999 LOC_Os06g45090 expressed protein FN3918-S Chr6 7290184 Chr2 23232074 0 Translocation 0 FN3918-S Chr7 16501624 A-G 0 0 Single Base Substitution 0 HET FN3918-S Chr7 19555680 Chr3 15104039 0 Translocation 0 FN3918-S Chr7 24193005 Chr6 27170610 0 Translocation 0 FN3918-S Chr7 26828542 26828543 0 0 Deletion 1 HET FN3918-S Chr7 5553100 G-A 0 0 Single Base Substitution 0 HET FN3918-S Chr7 8446954 A-T 0 0 Single Base Substitution 0 HET FN3918-S Chr8 10208757 Chr6 27273028 0 Translocation 0 LOC_Os06g45090 expressed protein FN3918-S Chr8 10208757 Chr6 27273028 0 Translocation 0 LOC_Os08g16690 expressed protein FN3918-S Chr8 10208764 Chr6 27275501 0 Translocation 0 LOC_Os06g45100 FAD binding domain of DNA photolyase domain containing protein, expressed FN3918-S Chr8 10208764 Chr6 27275501 0 Translocation 0 LOC_Os08g16690 expressed protein FN3918-S Chr8 11943516 A-T 0 0 Single Base Substitution 0 HET FN3918-S Chr8 12951525 12972379 0 0 Inversion 0 LOC_Os08g21695 retrotransposon protein, putative, unclassified FN3918-S Chr8 25659452 25659458 0 0 Deletion 6 HET