FN3939-S Chr1 10633731 G-C 0 0 Single Base Substitution 0 Homo FN3939-S Chr1 14537681 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g25650 retrotransposon protein, putative, unclassified, expressed FN3939-S Chr1 14954797 G-A 0 0 Single Base Substitution 0 Homo FN3939-S Chr1 1662781 T-A 0 0 Single Base Substitution 0 Homo FN3939-S Chr1 23748374 G-A 0 0 Single Base Substitution 0 Homo FN3939-S Chr1 28811337 T-C 0 0 Single Base Substitution 0 HET FN3939-S Chr1 29528523 C-T 0 0 Single Base Substitution 0 HET FN3939-S Chr1 32826509 C-T 0 0 Single Base Substitution 0 HET FN3939-S Chr1 35821451 36411521 0 0 Inversion 0 LOC_Os01g62870 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN3939-S Chr1 35821467 36411594 0 0 Inversion 0 LOC_Os01g62870 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN3939-S Chr1 41621721 41621722 0 0 Deletion 1 frameshift_variant HET LOC_Os01g71850 transposon protein, putative, unclassified, expressed FN3939-S Chr1 9639204 C-G 0 0 Single Base Substitution 0 HET FN3939-S Chr10 11931683 12893446 0 0 Inversion 0 LOC_Os10g22940 expressed protein FN3939-S Chr10 11931683 12893446 0 0 Inversion 0 LOC_Os10g25040 red chlorophyll catabolite reductase, putative, expressed FN3939-S Chr10 11931696 12893448 0 0 Inversion 0 LOC_Os10g22940 expressed protein FN3939-S Chr10 11931696 12893448 0 0 Inversion 0 LOC_Os10g25040 red chlorophyll catabolite reductase, putative, expressed FN3939-S Chr10 11955561 11955566 0 0 Deletion 5 Homo FN3939-S Chr10 6835678 6835679 0 0 Deletion 1 HET FN3939-S Chr11 13316678 C-T 0 0 Single Base Substitution 0 HET FN3939-S Chr11 15133454 G-A 0 0 Single Base Substitution 0 HET FN3939-S Chr11 24275661 24275662 0 0 Deletion 1 HET FN3939-S Chr11 26032957 G-A 0 0 Single Base Substitution 0 Homo FN3939-S Chr11 6235049 6235057 0 0 Deletion 8 HET FN3939-S Chr11 8077483 8077495 0 0 Deletion 12 inframe_deletion HET LOC_Os11g14380 resistance protein LR10, putative, expressed FN3939-S Chr11 9674140 G-A 0 0 Single Base Substitution 0 HET FN3939-S Chr12 15554035 15554044 0 0 Deletion 9 Homo FN3939-S Chr12 2157778 2571669 0 0 Inversion 0 LOC_Os12g04980 DNA repair protein Rad51, putative, expressed FN3939-S Chr12 2157778 2571669 0 0 Inversion 0 LOC_Os12g05600 hydrolase, alpha/beta fold family protein, putative, expressed FN3939-S Chr12 2157784 2571676 0 0 Inversion 0 LOC_Os12g04980 DNA repair protein Rad51, putative, expressed FN3939-S Chr12 2157784 2571676 0 0 Inversion 0 LOC_Os12g05600 hydrolase, alpha/beta fold family protein, putative, expressed FN3939-S Chr12 25860885 T-C 0 0 Single Base Substitution 0 Homo FN3939-S Chr12 27167807 Chr6 16774721 0 Translocation 0 LOC_Os06g29350 myosin, putative, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g05980 DUF584 domain containing protein, putative, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g05990 No apical meristem protein, putative, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06010 retrotransposon protein, putative, unclassified, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06020 mRNA-decapping enzyme, putative, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06030 OsFBX439 - F-box domain containing protein, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06040 transposon protein, putative, unclassified, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06050 MATE, putative, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06060 amino acid permease family protein, putative, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06070 expressed protein FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06080 expressed protein FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06090 expressed protein FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06100 TLD family protein, putative, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06110 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06120 hypothetical protein FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06130 expressed protein FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06140 expressed protein FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06150 DUF623 domain containing protein, expressed FN3939-S Chr12 2751001 2916000 0 0 Deletion 164999 LOC_Os12g06160 DUF623 domain containing protein, expressed FN3939-S Chr12 3477469 G-C 0 0 Single Base Substitution 0 HET FN3939-S Chr12 6248354 Chr8 4190745 0 Translocation 0 FN3939-S Chr2 6420533 C-T 0 0 Single Base Substitution 0 HET FN3939-S Chr3 21448426 21448427 0 0 Deletion 1 HET FN3939-S Chr3 33511075 G-A 0 0 Single Base Substitution 0 HET FN3939-S Chr3 5024961 G-A 0 0 Single Base Substitution 0 Homo FN3939-S Chr4 11703643 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g20850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3939-S Chr4 14879283 14879287 0 0 Deletion 4 Homo FN3939-S Chr4 21386815 C-G 0 0 Single Base Substitution 0 Homo FN3939-S Chr4 23541906 23541909 0 0 Deletion 3 Homo FN3939-S Chr4 27767226 Chr1 21792021 0 Translocation 0 LOC_Os04g46860 scarecrow, putative, expressed FN3939-S Chr4 27767561 Chr1 21792009 0 Translocation 0 FN3939-S Chr4 4773826 G-A 0 0 Single Base Substitution 0 HET FN3939-S Chr5 29421915 29421916 0 0 Deletion 1 frameshift_variant HET LOC_Os05g51290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3939-S Chr5 3522466 A-T 0 0 Single Base Substitution 0 HET FN3939-S Chr5 6426636 6426668 0 0 Deletion 32 HET FN3939-S Chr5 8155459 C-T 0 0 Single Base Substitution 0 HET FN3939-S Chr6 13352156 13352157 0 0 Deletion 1 HET FN3939-S Chr6 13809830 C-T 0 0 Single Base Substitution 0 HET FN3939-S Chr6 24208846 A-T 0 0 Single Base Substitution 0 HET FN3939-S Chr6 25133355 C-T 0 0 Single Base Substitution 0 HET FN3939-S Chr6 4935001 4965000 0 0 Deletion 29999 LOC_Os06g09679 chaperonin, putative, expressed FN3939-S Chr6 4935001 4965000 0 0 Deletion 29999 LOC_Os06g09688 chaperonin, putative, expressed FN3939-S Chr6 4935001 4965000 0 0 Deletion 29999 LOC_Os06g09698 expressed protein FN3939-S Chr6 4935001 4965000 0 0 Deletion 29999 LOC_Os06g09717 ethylene-responsive transcription factor, putative, expressed FN3939-S Chr6 4935001 4965000 0 0 Deletion 29999 LOC_Os06g09740 retrotransposon protein, putative, unclassified, expressed FN3939-S Chr7 26712271 Chr4 33521208 0 Translocation 0 FN3939-S Chr8 21684697 Chr2 16774482 0 Translocation 0 FN3939-S Chr8 2491842 2491855 0 0 Deletion 13 frameshift_variant HET LOC_Os08g04880 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3939-S Chr9 607910 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g01900 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3939-S Chr9 607911 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g01900 transposon protein, putative, CACTA, En/Spm sub-class, expressed