FN3949-S Chr1 13561897 T-C 0 0 Single Base Substitution 0 Homo FN3949-S Chr1 34981865 34981866 0 0 Deletion 1 frameshift_variant HET LOC_Os01g60490 WRKY22, expressed FN3949-S Chr1 40107058 40107060 0 0 Deletion 2 HET FN3949-S Chr10 18023300 A-G 0 0 Single Base Substitution 0 HET FN3949-S Chr10 18651219 Chr6 20546991 0 Translocation 0 LOC_Os06g35220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3949-S Chr10 18651225 Chr6 20547179 0 Translocation 0 LOC_Os06g35220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3949-S Chr10 18882311 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g35310 expressed protein FN3949-S Chr10 21140916 C-A 0 0 Single Base Substitution 0 HET FN3949-S Chr10 6884218 6884218 0 0 Insertion 2 HET FN3949-S Chr11 12792500 12792517 0 0 Deletion 17 splice_donor_variant&disruptive_inframe_deletion&splice_region_variant&intron_variant HET LOC_Os11g22310 retrotransposon protein, putative, unclassified, expressed FN3949-S Chr12 19763183 Chr5 15788925 0 Translocation 0 FN3949-S Chr12 9504115 G-C 0 0 Single Base Substitution 0 HET FN3949-S Chr2 17138005 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g28960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3949-S Chr2 20773376 20773392 0 0 Deletion 16 Homo FN3949-S Chr3 10509251 C-T 0 0 Single Base Substitution 0 HET FN3949-S Chr3 30923312 30923383 0 0 Deletion 71 HET FN3949-S Chr4 19633966 19633975 0 0 Deletion 9 HET FN3949-S Chr4 25249516 T-C 0 0 Single Base Substitution 0 HET FN3949-S Chr4 29385503 29385513 0 0 Deletion 10 HET FN3949-S Chr4 30790331 C-T 0 0 Single Base Substitution 0 HET FN3949-S Chr4 8902812 T-C 0 0 Single Base Substitution 0 Homo FN3949-S Chr5 15022488 15022491 0 0 Deletion 3 Homo FN3949-S Chr5 17159748 Chr1 28343589 0 Translocation 0 LOC_Os05g29690 retrotransposon protein, putative, unclassified, expressed FN3949-S Chr5 17163176 Chr1 28343605 0 Translocation 0 FN3949-S Chr5 17163182 Chr1 29786463 0 Translocation 0 LOC_Os01g51810 pentatricopeptide, putative, expressed FN3949-S Chr5 17164141 Chr1 29786465 0 Translocation 0 LOC_Os01g51810 pentatricopeptide, putative, expressed FN3949-S Chr5 19504670 A-G 0 0 Single Base Substitution 0 Homo FN3949-S Chr5 20601596 20601600 0 0 Deletion 4 frameshift_variant HET LOC_Os05g34730 ethylene-responsive transcription factor ERF020, putative, expressed FN3949-S Chr5 25766410 T-C 0 0 Single Base Substitution 0 Homo FN3949-S Chr5 3419137 3419145 0 0 Deletion 8 Homo FN3949-S Chr5 7657550 7657551 0 0 Deletion 1 Homo FN3949-S Chr5 7775397 7775404 0 0 Deletion 7 Homo FN3949-S Chr7 11860001 11897000 0 0 Deletion 36999 LOC_Os07g20530 hypothetical protein FN3949-S Chr7 11860001 11897000 0 0 Deletion 36999 LOC_Os07g20544 aspartokinase, chloroplast precursor, putative, expressed FN3949-S Chr7 11860001 11897000 0 0 Deletion 36999 LOC_Os07g20560 retrotransposon protein, putative, unclassified, expressed FN3949-S Chr7 11860001 11897000 0 0 Deletion 36999 LOC_Os07g20570 hypothetical protein FN3949-S Chr7 11860001 11897000 0 0 Deletion 36999 LOC_Os07g20580 DEAD-box ATP-dependent RNA helicase, putative, expressed FN3949-S Chr7 12499663 C-T 0 0 Single Base Substitution 0 Homo FN3949-S Chr7 4604520 Chr1 7703824 0 Translocation 0 FN3949-S Chr7 6119838 T-C 0 0 Single Base Substitution 0 HET FN3949-S Chr7 699493 C-A 0 0 Single Base Substitution 0 HET FN3949-S Chr8 12270080 12270087 0 0 Deletion 7 Homo FN3949-S Chr8 24912587 G-A 0 0 Single Base Substitution 0 HET FN3949-S Chr8 26773401 26773403 0 0 Deletion 2 HET FN3949-S Chr8 27565723 G-A 0 0 Single Base Substitution 0 HET FN3949-S Chr9 14145358 14145368 0 0 Deletion 10 HET FN3949-S Chr9 15551395 15551399 0 0 Deletion 4 HET FN3949-S Chr9 22752113 22752114 0 0 Deletion 1 Homo FN3949-S Chr9 2499782 2499783 0 0 Deletion 1 HET