FN3955-S Chr1 22995464 A-G 0 0 Single Base Substitution 0 Homo FN3955-S Chr1 426872 426876 0 0 Deletion 4 frameshift_variant Homo LOC_Os01g01800 expressed protein FN3955-S Chr1 42867394 42983495 0 0 Inversion 0 LOC_Os01g74200 protein kinase domain containing protein, expressed FN3955-S Chr1 42867399 42983512 0 0 Inversion 0 LOC_Os01g74200 protein kinase domain containing protein, expressed FN3955-S Chr10 10473076 Chr1 18784334 0 Translocation 0 FN3955-S Chr10 10480268 T-G 0 0 Single Base Substitution 0 Homo FN3955-S Chr10 10480272 T-C 0 0 Single Base Substitution 0 Homo FN3955-S Chr10 13192235 Chr8 18078115 0 Translocation 0 LOC_Os08g29490 retrotransposon protein, putative, unclassified, expressed FN3955-S Chr10 446581 446581 0 0 Insertion 2 HET FN3955-S Chr10 5619500 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed FN3955-S Chr10 7831128 Chr2 17726454 0 Translocation 0 LOC_Os02g29790 retrotransposon, putative, centromere-specific, expressed FN3955-S Chr10 7831128 Chr2 17726454 0 Translocation 0 LOC_Os10g14940 retrotransposon, putative, centromere-specific, expressed FN3955-S Chr11 1832646 T-A 0 0 Single Base Substitution 0 HET FN3955-S Chr11 23930971 Chr2 20283956 0 Translocation 0 FN3955-S Chr11 23930982 Chr2 20282905 0 Translocation 0 FN3955-S Chr11 27569079 Chr5 16490291 0 Translocation 0 FN3955-S Chr12 10034894 G-T 0 0 Single Base Substitution 0 HET FN3955-S Chr12 13335015 13335020 0 0 Deletion 5 Homo FN3955-S Chr12 20331815 Chr8 17926417 0 Translocation 0 LOC_Os08g29240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3955-S Chr12 20331815 Chr8 17926417 0 Translocation 0 LOC_Os12g33680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3955-S Chr12 24242495 C-T 0 0 Single Base Substitution 0 Homo FN3955-S Chr2 19071601 19071621 0 0 Deletion 20 HET FN3955-S Chr2 20244001 20283000 0 0 Deletion 38999 LOC_Os02g33980 expressed protein FN3955-S Chr2 2448033 A-T 0 0 Single Base Substitution 0 HET FN3955-S Chr2 31068314 31068315 0 0 Deletion 1 frameshift_variant Homo LOC_Os02g50840 BAH domain containing protein, putative, expressed FN3955-S Chr2 4670476 4670476 0 0 Insertion 1 HET FN3955-S Chr2 4880312 T-A 0 0 Single Base Substitution 0 HET FN3955-S Chr2 9331638 9331642 0 0 Deletion 4 HET FN3955-S Chr3 14993935 Chr2 24252965 0 Translocation 0 LOC_Os03g26200 methyltransferase, putative, expressed FN3955-S Chr3 18216929 Chr1 9105547 0 Translocation 0 LOC_Os03g31839 transposon protein, putative, unclassified, expressed FN3955-S Chr3 20712719 G-A 0 0 Single Base Substitution 0 HET FN3955-S Chr3 20747905 T-A 0 0 Single Base Substitution 0 HET FN3955-S Chr3 20747906 G-A 0 0 Single Base Substitution 0 HET FN3955-S Chr3 9863238 T-C 0 0 Single Base Substitution 0 HET FN3955-S Chr4 16326011 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g27610 retrotransposon protein, putative, unclassified, expressed FN3955-S Chr4 1723377 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g03830 OsWAK29 - OsWAK receptor-like protein kinase, expressed FN3955-S Chr4 1723378 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g03830 OsWAK29 - OsWAK receptor-like protein kinase, expressed FN3955-S Chr4 19486624 A-G 0 0 Single Base Substitution 0 HET FN3955-S Chr4 2359340 2359340 0 0 Insertion 2 HET FN3955-S Chr4 29377951 29377951 0 0 Insertion 2 HET FN3955-S Chr4 33646953 33646961 0 0 Deletion 8 frameshift_variant Homo LOC_Os04g56440 ENT domain containing protein, expressed FN3955-S Chr4 6037365 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g11090 retrotransposon protein, putative, unclassified, expressed FN3955-S Chr5 1006447 1064611 0 0 Inversion 0 LOC_Os05g02790 KIP1, putative, expressed FN3955-S Chr5 1006449 1064613 0 0 Inversion 0 LOC_Os05g02790 KIP1, putative, expressed FN3955-S Chr5 12214362 12214362 0 0 Insertion 4 HET FN3955-S Chr5 12557799 12557801 0 0 Deletion 2 frameshift_variant Homo LOC_Os05g21230 retrotransposon protein, putative, unclassified, expressed FN3955-S Chr5 501023 G-A 0 0 Single Base Substitution 0 HET FN3955-S Chr5 501026 C-A 0 0 Single Base Substitution 0 HET FN3955-S Chr5 7044444 G-A 0 0 Single Base Substitution 0 HET FN3955-S Chr5 8434291 G-A 0 0 Single Base Substitution 0 Homo FN3955-S Chr6 16133254 16133254 0 0 Insertion 1 frameshift_variant&stop_gained Homo LOC_Os06g28360 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3955-S Chr6 17209081 T-A 0 0 Single Base Substitution 0 HET FN3955-S Chr6 17722338 17722343 0 0 Deletion 5 HET FN3955-S Chr6 23799292 23799294 0 0 Deletion 2 HET FN3955-S Chr6 25519339 Chr2 26045500 0 Translocation 0 FN3955-S Chr6 25520580 Chr2 26045496 0 Translocation 0 FN3955-S Chr7 1065828 A-G 0 0 Single Base Substitution 0 Homo FN3955-S Chr7 14100867 14100870 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os07g24810 retrotransposon protein, putative, unclassified, expressed FN3955-S Chr7 16719690 A-G 0 0 Single Base Substitution 0 HET FN3955-S Chr7 16916733 G-T 0 0 Single Base Substitution 0 HET FN3955-S Chr7 19358072 19358074 0 0 Deletion 2 HET FN3955-S Chr7 5007175 G-C 0 0 Single Base Substitution 0 HET FN3955-S Chr8 14645205 Chr4 3954961 0 Translocation 0 LOC_Os08g24260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3955-S Chr8 15349949 A-G 0 0 Single Base Substitution 0 HET FN3955-S Chr8 1620755 G-A 0 0 Single Base Substitution 0 Homo FN3955-S Chr8 22283208 G-A 0 0 Single Base Substitution 0 HET FN3955-S Chr8 23062929 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g36520 peptidase aspartic family protein, putative, expressed FN3955-S Chr8 26805478 26805482 0 0 Deletion 4 HET FN3955-S Chr8 2725187 Chr6 25806541 0 Translocation 0 LOC_Os06g42950 retrotransposon protein, putative, unclassified FN3955-S Chr8 2725187 Chr6 25806541 0 Translocation 0 LOC_Os08g05240 retrotransposon protein, putative, unclassified, expressed FN3955-S Chr9 11709355 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g19570 AGAP009532-PA, putative, expressed FN3955-S Chr9 20032563 T-C 0 0 Single Base Substitution 0 HET FN3955-S Chr9 2264645 Chr2 35616841 0 Translocation 0 FN3955-S Chr9 8381529 A-C 0 0 Single Base Substitution 0 HET FN3955-S Chr9 9490499 C-T 0 0 Single Base Substitution 0 HET