FN3964-S Chr1 19529843 G-A 0 0 Single Base Substitution 0 HET FN3964-S Chr1 27635245 27635261 0 0 Deletion 16 HET FN3964-S Chr1 29918763 29918776 0 0 Deletion 13 HET FN3964-S Chr1 38440229 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g66170 SNARE associated Golgi protein, putative, expressed FN3964-S Chr1 5151144 C-T 0 0 Single Base Substitution 0 HET FN3964-S Chr10 12457294 G-A 0 0 Single Base Substitution 0 HET FN3964-S Chr10 15215664 G-C 0 0 Single Base Substitution 0 HET FN3964-S Chr10 15258442 C-T 0 0 Single Base Substitution 0 HET FN3964-S Chr10 17713236 17713245 0 0 Deletion 9 HET FN3964-S Chr10 21613328 Chr1 36375737 0 Translocation 0 LOC_Os10g40324 expressed protein FN3964-S Chr10 21613396 Chr1 36374190 0 Translocation 0 LOC_Os10g40324 expressed protein FN3964-S Chr10 3356709 3356709 0 0 Insertion 2 HET FN3964-S Chr10 6914240 G-T 0 0 Single Base Substitution 0 HET FN3964-S Chr11 14133465 A-G 0 0 Single Base Substitution 0 Homo FN3964-S Chr11 3506611 3506617 0 0 Deletion 6 HET FN3964-S Chr11 8157508 8157513 0 0 Deletion 5 frameshift_variant HET LOC_Os11g14520 expressed protein FN3964-S Chr11 8996035 8996043 0 0 Deletion 8 HET FN3964-S Chr2 21125484 21125493 0 0 Deletion 9 HET FN3964-S Chr2 23485754 23485770 0 0 Deletion 16 frameshift_variant Homo LOC_Os02g38840 glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed FN3964-S Chr2 30175401 30175401 0 0 Insertion 5 HET FN3964-S Chr2 30195149 30195149 0 0 Insertion 4 HET FN3964-S Chr2 352909 352925 0 0 Deletion 16 frameshift_variant HET LOC_Os02g01610 pentatricopeptide, putative, expressed FN3964-S Chr3 10705961 C-A 0 0 Single Base Substitution 0 HET FN3964-S Chr3 13697161 G-A 0 0 Single Base Substitution 0 HET FN3964-S Chr3 14653853 G-T 0 0 Single Base Substitution 0 HET FN3964-S Chr3 1578883 1578886 0 0 Deletion 3 HET FN3964-S Chr3 18699629 G-C 0 0 Single Base Substitution 0 HET FN3964-S Chr3 32517871 G-T 0 0 Single Base Substitution 0 HET FN3964-S Chr3 32517872 A-T 0 0 Single Base Substitution 0 HET FN3964-S Chr4 14034374 A-C 0 0 Single Base Substitution 0 HET FN3964-S Chr4 15198001 15238000 0 0 Deletion 39999 LOC_Os04g26110 hypothetical protein FN3964-S Chr4 15198001 15238000 0 0 Deletion 39999 LOC_Os04g26120 TNP1, putative, expressed FN3964-S Chr4 15198001 15238000 0 0 Deletion 39999 LOC_Os04g26130 transposon protein, putative, Mariner sub-class, expressed FN3964-S Chr4 16735243 16735246 0 0 Deletion 3 HET FN3964-S Chr4 18237806 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g30520 expressed protein FN3964-S Chr4 23382527 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g39290 heavy metal transport/detoxification protein, putative, expressed FN3964-S Chr4 28465448 G-T 0 0 Single Base Substitution 0 HET FN3964-S Chr4 8051478 A-T 0 0 Single Base Substitution 0 HET FN3964-S Chr4 8051479 G-T 0 0 Single Base Substitution 0 HET FN3964-S Chr4 8357745 8406908 0 0 Inversion 0 LOC_Os04g14860 retrotransposon protein, putative, unclassified, expressed FN3964-S Chr4 8357745 8406908 0 0 Inversion 0 LOC_Os04g14960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3964-S Chr4 8357786 8406926 0 0 Inversion 0 LOC_Os04g14860 retrotransposon protein, putative, unclassified, expressed FN3964-S Chr4 8357786 8406926 0 0 Inversion 0 LOC_Os04g14960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3964-S Chr4 8431930 8431933 0 0 Deletion 3 HET FN3964-S Chr4 9779073 G-A 0 0 Single Base Substitution 0 HET FN3964-S Chr5 10191703 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g17720 retrotransposon protein, putative, unclassified FN3964-S Chr5 11099651 11099658 0 0 Deletion 7 HET FN3964-S Chr5 3413243 Chr4 8192803 0 Translocation 0 LOC_Os04g14600 retrotransposon protein, putative, unclassified, expressed FN3964-S Chr5 3413243 Chr4 8192803 0 Translocation 0 LOC_Os05g06610 retrotransposon protein, putative, unclassified, expressed FN3964-S Chr5 3413259 Chr4 16461922 0 Translocation 0 LOC_Os05g06610 retrotransposon protein, putative, unclassified, expressed FN3964-S Chr5 3597431 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g06870 transposon protein, putative, unclassified, expressed FN3964-S Chr5 3597432 G-T 0 0 Single Base Substitution 0 HET FN3964-S Chr5 4626591 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g08480 cytokinin-O-glucosyltransferase 1, putative, expressed FN3964-S Chr6 12972061 12972064 0 0 Deletion 3 Homo FN3964-S Chr6 15696573 A-G 0 0 Single Base Substitution 0 HET FN3964-S Chr6 25742035 Chr1 36374191 0 Translocation 0 LOC_Os06g42824 expressed protein FN3964-S Chr6 4366992 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g08730 expressed protein FN3964-S Chr6 6999300 6999300 0 0 Insertion 478 HET FN3964-S Chr6 9246517 G-A 0 0 Single Base Substitution 0 HET FN3964-S Chr7 11360508 G-A 0 0 Single Base Substitution 0 Homo FN3964-S Chr7 11460076 11460076 0 0 Insertion 1 HET FN3964-S Chr7 21746525 21746547 0 0 Deletion 22 HET FN3964-S Chr7 9714029 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g16560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3964-S Chr8 17299160 Chr4 18885956 0 Translocation 0 LOC_Os08g28350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3964-S Chr8 22884298 T-A 0 0 Single Base Substitution 0 Homo FN3964-S Chr8 25577210 C-T 0 0 Single Base Substitution 0 HET FN3964-S Chr8 27003594 27003595 0 0 Deletion 1 HET FN3964-S Chr8 27021720 27021722 0 0 Deletion 2 HET FN3964-S Chr8 27881320 A-G 0 0 Single Base Substitution 0 HET FN3964-S Chr8 27908516 C-T 0 0 Single Base Substitution 0 Homo FN3964-S Chr8 28341722 Chr4 16461960 0 Translocation 0 LOC_Os08g45130 histone-lysine N-methyltransferase, putative, expressed FN3964-S Chr8 599694 Chr3 27088089 0 Translocation 0 FN3964-S Chr8 6622070 6622087 0 0 Deletion 17 frameshift_variant HET LOC_Os08g11260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3964-S Chr8 7220970 7220973 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os08g12270 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3964-S Chr8 9744458 Chr3 16641701 0 Translocation 0 FN3964-S Chr9 3655521 C-T 0 0 Single Base Substitution 0 HET