FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24170 hypothetical protein FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24180 retrotransposon protein, putative, unclassified FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24190 retrotransposon protein, putative, unclassified FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24200 expressed protein FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24210 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24220 retrotransposon protein, putative, Ty1-copia subclass FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24230 retrotransposon, putative, centromere-specific FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24240 expressed protein FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24260 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24270 hypothetical protein FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24280 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24294 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24310 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24320 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24330 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24340 expressed protein FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24350 expressed protein FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24360 retrotransposon protein, putative, unclassified FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24370 retrotransposon protein, putative, unclassified FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24380 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr1 13623001 13752000 0 0 Deletion 128999 LOC_Os01g24390 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr1 14203261 G-C 0 0 Single Base Substitution 0 Homo FN3968-S Chr1 17168052 G-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os01g31390 retrotransposon, putative, centromere-specific FN3968-S Chr1 25658373 26443715 0 0 Inversion 0 LOC_Os01g45210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3968-S Chr1 26330585 26443642 0 0 Inversion 0 FN3968-S Chr1 26431631 T-A 0 0 Single Base Substitution 0 HET FN3968-S Chr1 34123379 34123379 0 0 Insertion 1 HET FN3968-S Chr10 10209304 A-T 0 0 Single Base Substitution 0 HET FN3968-S Chr10 10209305 T-G 0 0 Single Base Substitution 0 HET FN3968-S Chr10 7883407 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g15060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3968-S Chr11 12935382 G-A 0 0 Single Base Substitution 0 HET FN3968-S Chr11 14183016 G-A 0 0 Single Base Substitution 0 HET FN3968-S Chr11 17349851 G-A 0 0 Single Base Substitution 0 HET FN3968-S Chr11 17349852 C-A 0 0 Single Base Substitution 0 HET FN3968-S Chr11 17890572 Chr2 8032374 0 Translocation 0 LOC_Os11g30720 conserved hypothetical protein FN3968-S Chr11 20734722 C-G 0 0 Single Base Substitution 0 HET FN3968-S Chr11 20811322 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g35510 retrotransposon protein, putative, unclassified FN3968-S Chr11 2163974 Chr1 37409969 0 Translocation 0 FN3968-S Chr11 22361013 G-C 0 0 Single Base Substitution 0 HET FN3968-S Chr11 25588704 C-T 0 0 Single Base Substitution 0 HET FN3968-S Chr11 26880260 A-G 0 0 Single Base Substitution 0 HET FN3968-S Chr11 27273175 27273188 0 0 Deletion 13 frameshift_variant HET LOC_Os11g45060 NB-ARC domain containing protein, expressed FN3968-S Chr11 28128450 T-C 0 0 Single Base Substitution 0 HET FN3968-S Chr12 10076294 C-T 0 0 Single Base Substitution 0 HET FN3968-S Chr12 10571227 C-T 0 0 Single Base Substitution 0 HET FN3968-S Chr12 11596921 11596930 0 0 Deletion 9 HET FN3968-S Chr12 19337855 T-G 0 0 Single Base Substitution 0 HET FN3968-S Chr12 2896854 3471115 0 0 Inversion 0 LOC_Os12g07080 transposon protein, putative, Mutator sub-class, expressed FN3968-S Chr12 3471105 Chr10 18402398 0 Translocation 0 LOC_Os10g34490 phosphate translocator-related, putative, expressed FN3968-S Chr12 3471105 Chr10 18402398 0 Translocation 0 LOC_Os12g07080 transposon protein, putative, Mutator sub-class, expressed FN3968-S Chr2 14327844 T-A 0 0 Single Base Substitution 0 HET FN3968-S Chr2 15910190 15910191 0 0 Deletion 1 HET FN3968-S Chr2 1815871 1815880 0 0 Deletion 9 Homo FN3968-S Chr2 30018839 T-C 0 0 Single Base Substitution 0 HET FN3968-S Chr2 31627185 31627186 0 0 Deletion 1 HET FN3968-S Chr2 8639469 C-G 0 0 Single Base Substitution 0 HET FN3968-S Chr2 8684415 Chr1 16530685 0 Translocation 0 LOC_Os01g29488 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr3 10134117 Chr1 7229198 0 Translocation 0 FN3968-S Chr3 10134125 Chr2 19415633 0 Translocation 0 LOC_Os02g32690 pleiotropic drug resistance protein 15, putative, expressed FN3968-S Chr3 18026476 G-A 0 0 Single Base Substitution 0 HET FN3968-S Chr3 21204873 21204884 0 0 Deletion 11 Homo FN3968-S Chr3 24368883 24368894 0 0 Deletion 11 Homo FN3968-S Chr3 27553483 27971347 0 0 Inversion 0 LOC_Os03g48390 expressed protein FN3968-S Chr3 27553483 27971347 0 0 Inversion 0 LOC_Os03g49100 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr3 27553486 27971356 0 0 Inversion 0 LOC_Os03g48390 expressed protein FN3968-S Chr3 27553486 27971356 0 0 Inversion 0 LOC_Os03g49100 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr3 8947447 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g16220 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed FN3968-S Chr4 23226879 23226884 0 0 Deletion 5 frameshift_variant Homo LOC_Os04g39080 OsFBX140 - F-box domain containing protein, expressed FN3968-S Chr4 25066811 T-A 0 0 Single Base Substitution 0 Homo FN3968-S Chr4 28519263 28519266 0 0 Deletion 3 Homo FN3968-S Chr4 34660963 A-T 0 0 Single Base Substitution 0 Homo FN3968-S Chr5 10455384 T-C 0 0 Single Base Substitution 0 HET FN3968-S Chr5 21991208 21991213 0 0 Deletion 5 frameshift_variant HET LOC_Os05g37580 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr5 22446466 T-A 0 0 Single Base Substitution 0 HET FN3968-S Chr5 24163512 24163526 0 0 Deletion 14 HET FN3968-S Chr6 12350898 12471040 0 0 Inversion 0 FN3968-S Chr6 17031520 17031521 0 0 Deletion 1 HET FN3968-S Chr6 8720136 T-A 0 0 Single Base Substitution 0 HET FN3968-S Chr6 9907388 C-T 0 0 Single Base Substitution 0 HET FN3968-S Chr7 12175990 12175991 0 0 Deletion 1 HET FN3968-S Chr7 12310432 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g22000 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr7 15963306 15963306 0 0 Insertion 2 HET FN3968-S Chr7 2545734 2545748 0 0 Deletion 14 HET FN3968-S Chr7 2973530 2973530 0 0 Insertion 1 HET FN3968-S Chr8 16464991 Chr7 13467804 0 Translocation 0 FN3968-S Chr8 21464189 21464192 0 0 Deletion 3 HET FN3968-S Chr8 2824391 2824391 0 0 Insertion 1 frameshift_variant HET LOC_Os08g05360 transposon protein, putative, unclassified, expressed FN3968-S Chr8 7685490 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g12920 retrotransposon protein, putative, unclassified, expressed FN3968-S Chr9 14643260 14643260 0 0 Insertion 1 HET FN3968-S Chr9 17468457 17468880 0 0 Inversion 0 LOC_Os09g28740 gibberellin receptor GID1L2, putative, expressed FN3968-S Chr9 17468487 17468888 0 0 Inversion 0 LOC_Os09g28740 gibberellin receptor GID1L2, putative, expressed FN3968-S Chr9 21286028 21286030 0 0 Deletion 2 HET FN3968-S Chr9 4127126 4127127 0 0 Deletion 1 HET FN3968-S Chr9 7215290 7215296 0 0 Deletion 6 Homo