FN3992-S Chr1 12698015 T-A 0 0 Single Base Substitution 0 Homo FN3992-S Chr1 22054387 C-T 0 0 Single Base Substitution 0 HET FN3992-S Chr1 26607648 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g46710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3992-S Chr1 26629602 C-G 0 0 Single Base Substitution 0 HET FN3992-S Chr1 33209023 G-A 0 0 Single Base Substitution 0 HET FN3992-S Chr1 33670341 G-A 0 0 Single Base Substitution 0 Homo FN3992-S Chr1 34411044 T-C 0 0 Single Base Substitution 0 HET FN3992-S Chr10 10437348 G-T 0 0 Single Base Substitution 0 HET FN3992-S Chr10 11081286 G-T 0 0 Single Base Substitution 0 HET FN3992-S Chr10 11081292 G-A 0 0 Single Base Substitution 0 HET FN3992-S Chr10 14701817 Chr7 7408651 0 Translocation 0 LOC_Os07g12900 cadmium/zinc-transporting ATPase, putative, expressed FN3992-S Chr10 15485692 15485713 0 0 Deletion 21 HET FN3992-S Chr10 2607824 Chr6 15332763 0 Translocation 0 LOC_Os10g05270 retrotransposon protein, putative, Ty3-gypsy subclass FN3992-S Chr11 11609269 T-A 0 0 Single Base Substitution 0 HET FN3992-S Chr11 13216975 G-T 0 0 Single Base Substitution 0 HET FN3992-S Chr11 15179079 15181142 0 0 Inversion 0 FN3992-S Chr11 16991443 G-A 0 0 Single Base Substitution 0 HET FN3992-S Chr12 1123610 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g03010 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr12 14371991 T-G 0 0 Single Base Substitution 0 Homo FN3992-S Chr12 21964312 21964312 0 0 Insertion 1 HET FN3992-S Chr12 25725078 Chr2 15723881 0 Translocation 0 LOC_Os02g26780 transposon protein, putative, unclassified, expressed FN3992-S Chr12 25725078 Chr2 15723881 0 Translocation 0 LOC_Os12g41540 expressed protein FN3992-S Chr12 26835019 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g43230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3992-S Chr12 640611 Chr7 28279342 0 Translocation 0 LOC_Os07g47300 spo0B-associated GTP-binding protein, putative, expressed FN3992-S Chr12 640611 Chr7 28279342 0 Translocation 0 LOC_Os12g02120 dual specificity protein phosphatase, putative, expressed FN3992-S Chr12 640615 Chr7 28281479 0 Translocation 0 LOC_Os12g02120 dual specificity protein phosphatase, putative, expressed FN3992-S Chr12 9203871 A-G 0 0 Single Base Substitution 0 Homo FN3992-S Chr2 1298553 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os02g03240 transposon protein, putative, unclassified, expressed FN3992-S Chr2 195610 G-A 0 0 Single Base Substitution 0 HET FN3992-S Chr2 26224100 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g43450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3992-S Chr2 3239808 3239809 0 0 Deletion 1 frameshift_variant HET LOC_Os02g06500 DSHCT domain containing protein, expressed FN3992-S Chr2 62408 A-G 0 0 Single Base Substitution 0 HET FN3992-S Chr2 7443411 C-A 0 0 Single Base Substitution 0 HET FN3992-S Chr2 7561396 A-G 0 0 Single Base Substitution 0 HET FN3992-S Chr3 11441482 11441486 0 0 Deletion 4 Homo FN3992-S Chr3 12910957 C-T 0 0 Single Base Substitution 0 Homo FN3992-S Chr3 14890437 C-T 0 0 Single Base Substitution 0 HET FN3992-S Chr3 23143532 23143532 0 0 Insertion 1 frameshift_variant HET LOC_Os03g41624 retrotransposon, putative, centromere-specific, expressed FN3992-S Chr3 30979550 G-A 0 0 Single Base Substitution 0 HET FN3992-S Chr3 32774982 A-T 0 0 Single Base Substitution 0 HET FN3992-S Chr3 35566492 A-G 0 0 Single Base Substitution 0 HET FN3992-S Chr4 11739351 11739351 0 0 Insertion 894 HET FN3992-S Chr4 1316171 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g03150 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr4 22271704 T-C 0 0 Single Base Substitution 0 HET FN3992-S Chr4 22679214 22679214 0 0 Insertion 1 HET FN3992-S Chr4 2872949 2873059 0 0 Deletion 110 HET FN3992-S Chr4 5873066 6203440 0 0 Inversion 0 FN3992-S Chr4 5873068 6203440 0 0 Inversion 0 FN3992-S Chr4 6229400 A-G 0 0 Single Base Substitution 0 HET FN3992-S Chr5 17209418 G-T 0 0 Single Base Substitution 0 Homo FN3992-S Chr5 17450371 17450375 0 0 Deletion 4 Homo FN3992-S Chr5 17887139 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g30820 protein kinase, putative, expressed FN3992-S Chr5 4038957 4038958 0 0 Deletion 1 frameshift_variant HET LOC_Os05g07540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3992-S Chr5 60742 T-A 0 0 Single Base Substitution 0 HET FN3992-S Chr6 16775155 16775156 0 0 Deletion 1 frameshift_variant HET LOC_Os06g29350 myosin, putative, expressed FN3992-S Chr6 17847281 Chr3 25571248 0 Translocation 0 LOC_Os03g45290 ankyrin repeat domain-containing protein 50, putative, expressed FN3992-S Chr6 25809598 25809599 0 0 Deletion 1 HET FN3992-S Chr6 29264180 29264180 0 0 Insertion 10 HET FN3992-S Chr6 7995358 C-T 0 0 Single Base Substitution 0 HET FN3992-S Chr7 28279324 28524862 0 0 Inversion 0 LOC_Os07g47300 spo0B-associated GTP-binding protein, putative, expressed FN3992-S Chr7 28281482 28524868 0 0 Inversion 0 FN3992-S Chr7 28539344 A-T 0 0 Single Base Substitution 0 HET FN3992-S Chr7 29348830 Chr4 12000 0 Translocation 0 LOC_Os07g49010 TOPBP1B - Similar to DNA replication protein TOPBP1 from, expressed FN3992-S Chr7 8333281 G-A 0 0 Single Base Substitution 0 Homo FN3992-S Chr8 16402949 Chr1 17724708 0 Translocation 0 FN3992-S Chr8 21577541 T-C 0 0 Single Base Substitution 0 Homo FN3992-S Chr8 22615788 22615790 0 0 Deletion 2 Homo FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40640 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40650 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40660 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40670 retrotransposon protein, putative, unclassified FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40680 glycosyl hydrolase, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40690 glycosyl hydrolase, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40700 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40710 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40720 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40730 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40740 glycosyl hydrolase, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40750 expressed protein FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40760 retrotransposon protein, putative, Ty3-gypsy subclass FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40780 hypothetical protein FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40790 DNA repair ATPase-related, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40800 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40810 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40820 expressed protein FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40830 pumilio domain-containing protein PPD1, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40840 exo70 exocyst complex subunit, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40850 mitochondrial carrier protein, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40860 RNA pseudouridine synthase, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40870 pentatricopeptide repeat protein, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40880 RNA recognition motif containing protein, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40890 spermidine synthase-related, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40900 auxin response factor, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40910 expressed protein FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40919 expressed protein FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40930 Alpha amylase, catalytic domain containing protein, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40940 expressed protein FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40950 expressed protein FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40960 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40970 retrotransposon protein, putative, unclassified FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40980 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g40990 receptor-like protein kinase 1, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g41000 extracellular ligand-gated ion channel, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g41010 zinc finger family protein, putative, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g41020 retrotransposon protein, putative, unclassified, expressed FN3992-S Chr8 25733001 25952000 0 0 Deletion 218999 LOC_Os08g41030 AP2 domain containing protein, expressed FN3992-S Chr8 8364104 8364107 0 0 Deletion 3 HET FN3992-S Chr8 9657013 G-A 0 0 Single Base Substitution 0 Homo FN3992-S Chr9 16089042 G-A 0 0 Single Base Substitution 0 Homo