FN3994-S Chr1 16356103 T-C 0 0 Single Base Substitution 0 HET FN3994-S Chr1 17332330 C-T 0 0 Single Base Substitution 0 HET FN3994-S Chr1 24292437 C-T 0 0 Single Base Substitution 0 Homo FN3994-S Chr1 27069865 27069868 0 0 Deletion 3 HET FN3994-S Chr1 27206905 T-A 0 0 Single Base Substitution 0 HET FN3994-S Chr1 33083050 33083050 0 0 Insertion 398 disruptive_inframe_insertion HET LOC_Os01g57250 expressed protein FN3994-S Chr1 36206396 T-A 0 0 Single Base Substitution 0 HET FN3994-S Chr10 10665238 10665242 0 0 Deletion 4 Homo FN3994-S Chr10 1540391 T-A 0 0 Single Base Substitution 0 HET FN3994-S Chr10 19703698 C-T 0 0 Single Base Substitution 0 HET FN3994-S Chr10 20441714 20441715 0 0 Deletion 1 HET FN3994-S Chr10 23027555 23027561 0 0 Deletion 6 inframe_deletion HET LOC_Os10g42690 jmjC domain containing protein, expressed FN3994-S Chr10 2394817 T-C 0 0 Single Base Substitution 0 Homo FN3994-S Chr10 3051991 3052002 0 0 Deletion 11 Homo FN3994-S Chr10 9807979 9807979 0 0 Insertion 4 HET FN3994-S Chr11 10280757 T-G 0 0 Single Base Substitution 0 HET FN3994-S Chr11 18838613 G-A 0 0 Single Base Substitution 0 Homo FN3994-S Chr11 21323131 G-A 0 0 Single Base Substitution 0 HET FN3994-S Chr11 27573986 Chr5 19106506 0 Translocation 0 LOC_Os11g45540 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed FN3994-S Chr11 28639609 Chr8 5549401 0 Translocation 0 FN3994-S Chr11 7181865 Chr1 32519257 0 Translocation 0 LOC_Os01g56410 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr11 7729946 A-T 0 0 Single Base Substitution 0 HET FN3994-S Chr12 20293572 Chr11 29013121 0 Translocation 0 LOC_Os11g48110 phenylalanine ammonia-lyase, putative, expressed FN3994-S Chr12 20293572 Chr11 29013121 0 Translocation 0 LOC_Os12g33610 phenylalanine ammonia-lyase, putative, expressed FN3994-S Chr12 21263522 Chr7 4114880 0 Translocation 0 LOC_Os12g34930 expressed protein FN3994-S Chr12 21713418 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g35710 uncharacterized protein At4g06744 precursor, putative, expressed FN3994-S Chr12 21983458 21983458 0 0 Insertion 1 HET FN3994-S Chr12 25850021 25850021 0 0 Insertion 1 frameshift_variant HET LOC_Os12g41730 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr12 2959787 Chr2 11267491 0 Translocation 0 LOC_Os02g19280 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr12 2959787 Chr2 11267491 0 Translocation 0 LOC_Os12g06230 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr2 17807551 18495154 0 0 Inversion 0 LOC_Os02g29960 cytochrome P450, putative, expressed FN3994-S Chr2 24944140 24944142 0 0 Deletion 2 Homo FN3994-S Chr2 2531208 T-G 0 0 Single Base Substitution 0 HET FN3994-S Chr3 10047167 10047167 0 0 Insertion 1 Homo FN3994-S Chr3 13503100 13503105 0 0 Deletion 5 HET FN3994-S Chr3 23709188 24363703 0 0 Inversion 0 FN3994-S Chr3 23709230 24363711 0 0 Inversion 0 FN3994-S Chr3 28977007 A-T 0 0 Single Base Substitution 0 HET FN3994-S Chr3 30157618 C-T 0 0 Single Base Substitution 0 Homo FN3994-S Chr4 24962093 Chr1 35969182 0 Translocation 0 LOC_Os04g42160 hypothetical protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g44990 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45000 short-chain dehydrogenase/reductase, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45010 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45020 MYB family transcription factor, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45030 hypothetical protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45040 DEAD-box ATP-dependent RNA helicase, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45050 hypothetical protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45060 MYB family transcription factor, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45070 remorin, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45080 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45090 cytochrome b561, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45100 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45110 serpin domain containing protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45120 serpin domain containing protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45130 heavy-metal-associated domain-containing protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45140 DTA2, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45160 DTA2, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45170 leucine-rich repeat family protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45180 EF hand family protein, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45190 MSP domain containing protein, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45200 DNA binding protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45210 peroxisomal biogenesis factor 11, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45220 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45230 hypothetical protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45240 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45270 aspartyl protease family protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45280 histidine triad family protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45290 glycosyl hydrolases, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45300 transposon protein, putative, unclassified, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45320 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45330 YABBY domain containing protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45340 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45350 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45360 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45370 OsSAUR19 - Auxin-responsive SAUR gene family member, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45380 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45390 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45420 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45450 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45460 cysteine-rich repeat secretory protein precursor, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45470 vacuolar-processing enzyme precursor, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45480 heat shock protein STI, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45490 elongation factor, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45500 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45510 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45520 integral membrane protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45540 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45550 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45560 hypothetical protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45570 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45580 kinesin motor domain containing protein, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45590 glyoxalase family protein, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45600 NDH-M H PLASTOQUINONE DEHY, putative, expressed FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45610 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45620 expressed protein FN3994-S Chr4 26615001 26991000 0 0 Deletion 375999 LOC_Os04g45630 expressed protein FN3994-S Chr4 28947442 28947443 0 0 Deletion 1 HET FN3994-S Chr4 34399027 34399028 0 0 Deletion 1 HET FN3994-S Chr5 14520416 14520416 0 0 Insertion 2 HET FN3994-S Chr6 14529875 14529882 0 0 Deletion 7 frameshift_variant Homo LOC_Os06g24730 hydrolase, alpha/beta fold family domain containing protein, expressed FN3994-S Chr6 17182333 A-G 0 0 Single Base Substitution 0 Homo FN3994-S Chr6 21657459 Chr4 17923967 0 Translocation 0 LOC_Os06g36770 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed FN3994-S Chr6 24573238 C-T 0 0 Single Base Substitution 0 Homo FN3994-S Chr6 25316947 T-C 0 0 Single Base Substitution 0 Homo FN3994-S Chr6 25316950 G-A 0 0 Single Base Substitution 0 Homo FN3994-S Chr6 7902220 G-A 0 0 Single Base Substitution 0 HET FN3994-S Chr7 26565498 26565605 0 0 Inversion 0 FN3994-S Chr7 26650835 26650844 0 0 Deletion 9 disruptive_inframe_deletion HET LOC_Os07g44670 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr7 27668979 27669000 0 0 Deletion 21 HET FN3994-S Chr7 8227764 Chr4 31548685 0 Translocation 0 LOC_Os04g52960 nucleolin, putative, expressed FN3994-S Chr7 8227764 Chr4 31548685 0 Translocation 0 LOC_Os07g14410 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3994-S Chr7 8563563 A-G 0 0 Single Base Substitution 0 Homo FN3994-S Chr7 9503025 9503031 0 0 Deletion 6 HET FN3994-S Chr8 10075683 T-A 0 0 Single Base Substitution 0 Homo FN3994-S Chr8 13024923 Chr5 11074369 0 Translocation 0 LOC_Os05g19080 retrotransposon protein, putative, unclassified, expressed FN3994-S Chr8 13024937 Chr5 9641227 0 Translocation 0 FN3994-S Chr8 13323883 13323883 0 0 Insertion 2 HET FN3994-S Chr8 22076979 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g35040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3994-S Chr8 22269495 22269496 0 0 Deletion 1 HET FN3994-S Chr8 24826593 A-T 0 0 Single Base Substitution 0 Homo FN3994-S Chr8 27596037 C-T 0 0 Single Base Substitution 0 Homo FN3994-S Chr8 3980778 3980778 0 0 Insertion 1 HET FN3994-S Chr8 8979722 8979725 0 0 Deletion 3 Homo FN3994-S Chr8 9763736 10188066 0 0 Inversion 0 FN3994-S Chr9 1361364 T-C 0 0 Single Base Substitution 0 HET FN3994-S Chr9 13620988 Chr4 7872859 0 Translocation 0 FN3994-S Chr9 395704 G-A 0 0 Single Base Substitution 0 HET FN3994-S Chr9 3997712 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g07860 retrotransposon protein, putative, unclassified FN3994-S Chr9 4453214 Chr8 19754312 0 Translocation 0 FN3994-S Chr9 5374723 5374724 0 0 Deletion 1 frameshift_variant HET LOC_Os09g09880 transposon protein, putative, CACTA, En/Spm sub-class FN3994-S Chr9 7357912 Chr3 32500834 0 Translocation 0