FN3998-S Chr1 15264281 A-G 0 0 Single Base Substitution 0 Homo FN3998-S Chr1 17464181 C-A 0 0 Single Base Substitution 0 Homo FN3998-S Chr1 22851458 C-G 0 0 Single Base Substitution 0 HET FN3998-S Chr1 23931268 23931281 0 0 Deletion 13 Homo FN3998-S Chr1 29542577 G-A 0 0 Single Base Substitution 0 Homo FN3998-S Chr1 3284166 3284167 0 0 Deletion 1 frameshift_variant HET LOC_Os01g06920 resistance protein SlVe1 precursor, putative, expressed FN3998-S Chr1 34919998 G-C 0 0 Single Base Substitution 0 HET FN3998-S Chr1 36083293 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g62350 60S ribosomal protein L36-2, putative, expressed FN3998-S Chr1 39328985 C-T 0 0 Single Base Substitution 0 HET FN3998-S Chr1 9208525 G-A 0 0 Single Base Substitution 0 Homo FN3998-S Chr10 15485829 15485831 0 0 Deletion 2 HET FN3998-S Chr10 21612212 21612212 0 0 Insertion 8 HET FN3998-S Chr11 18038151 G-C 0 0 Single Base Substitution 0 Homo FN3998-S Chr11 19169291 19169291 0 0 Insertion 1 Homo FN3998-S Chr11 20913259 20913261 0 0 Deletion 2 HET FN3998-S Chr11 22955915 22955916 0 0 Deletion 1 Homo FN3998-S Chr12 10987298 10987300 0 0 Deletion 2 Homo FN3998-S Chr12 12639019 12639020 0 0 Deletion 1 frameshift_variant Homo LOC_Os12g22380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3998-S Chr12 12766090 C-T 0 0 Single Base Substitution 0 Homo FN3998-S Chr12 22261786 G-C 0 0 Single Base Substitution 0 Homo FN3998-S Chr12 22275126 22275126 0 0 Insertion 1 HET FN3998-S Chr12 2399364 Chr6 1276278 0 Translocation 0 LOC_Os06g03340 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3998-S Chr12 2399364 Chr6 1276278 0 Translocation 0 LOC_Os12g05334 hypothetical protein FN3998-S Chr12 24664999 24665001 0 0 Deletion 2 HET FN3998-S Chr12 2488836 A-G 0 0 Single Base Substitution 0 Homo FN3998-S Chr12 25370427 Chr8 15270537 0 Translocation 0 FN3998-S Chr12 3105425 Chr3 25259142 0 Translocation 0 LOC_Os12g06464 expressed protein FN3998-S Chr12 8491772 8491838 0 0 Deletion 66 HET FN3998-S Chr12 9802432 Chr1 530979 0 Translocation 0 FN3998-S Chr2 20620935 20620935 0 0 Insertion 2 HET FN3998-S Chr2 23358219 G-A 0 0 Single Base Substitution 0 Homo FN3998-S Chr2 24997362 24997602 0 0 Inversion 0 FN3998-S Chr2 6579241 T-C 0 0 Single Base Substitution 0 Homo FN3998-S Chr3 19220895 A-G 0 0 Single Base Substitution 0 Homo FN3998-S Chr3 26568495 26568495 0 0 Insertion 1 frameshift_variant HET LOC_Os03g46980 retrotransposon protein, putative, unclassified, expressed FN3998-S Chr3 28218748 C-A 0 0 Single Base Substitution 0 Homo FN3998-S Chr3 28340513 28340520 0 0 Deletion 7 Homo FN3998-S Chr3 32893619 G-C 0 0 Single Base Substitution 0 HET FN3998-S Chr3 34478219 G-C 0 0 Single Base Substitution 0 HET FN3998-S Chr3 34478220 C-A 0 0 Single Base Substitution 0 HET FN3998-S Chr4 15957041 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g26980 terpene synthase, putative, expressed FN3998-S Chr4 17079988 17869576 0 0 Inversion 0 FN3998-S Chr4 17270175 G-A 0 0 Single Base Substitution 0 Homo FN3998-S Chr4 34838422 C-T 0 0 Single Base Substitution 0 Homo FN3998-S Chr4 8058294 A-G 0 0 Single Base Substitution 0 Homo FN3998-S Chr4 9824713 9824714 0 0 Deletion 1 frameshift_variant HET LOC_Os04g17880 retrotransposon protein, putative, unclassified, expressed FN3998-S Chr5 12214445 12214445 0 0 Insertion 4 HET FN3998-S Chr5 6248022 C-T 0 0 Single Base Substitution 0 HET FN3998-S Chr5 6949614 C-T 0 0 Single Base Substitution 0 HET FN3998-S Chr5 7269001 7306000 0 0 Deletion 36999 LOC_Os05g12660 hypothetical protein FN3998-S Chr5 7269001 7306000 0 0 Deletion 36999 LOC_Os05g12670 expressed protein FN3998-S Chr5 7269001 7306000 0 0 Deletion 36999 LOC_Os05g12680 retrotransposon protein, putative, unclassified, expressed FN3998-S Chr5 7269001 7306000 0 0 Deletion 36999 LOC_Os05g12700 retrotransposon protein, putative, unclassified FN3998-S Chr5 7269001 7306000 0 0 Deletion 36999 LOC_Os05g12710 expressed protein FN3998-S Chr5 7269001 7306000 0 0 Deletion 36999 LOC_Os05g12720 conserved hypothetical protein FN3998-S Chr5 7269001 7306000 0 0 Deletion 36999 LOC_Os05g12730 expressed protein FN3998-S Chr5 7269345 7310477 0 0 Inversion 0 LOC_Os05g12660 hypothetical protein FN3998-S Chr5 7269345 7310477 0 0 Inversion 0 LOC_Os05g12740 transposon protein, putative, unclassified, expressed FN3998-S Chr5 7805007 T-C 0 0 Single Base Substitution 0 HET FN3998-S Chr6 17069295 17069319 0 0 Deletion 24 Homo FN3998-S Chr6 20152409 20152409 0 0 Insertion 20 HET FN3998-S Chr7 1934001 1957000 0 0 Deletion 22999 LOC_Os07g04360 transposon protein, putative, unclassified, expressed FN3998-S Chr7 1934001 1957000 0 0 Deletion 22999 LOC_Os07g04370 expressed protein FN3998-S Chr7 1934001 1957000 0 0 Deletion 22999 LOC_Os07g04380 retrotransposon protein, putative, unclassified, expressed FN3998-S Chr7 1934001 1957000 0 0 Deletion 22999 LOC_Os07g04390 expressed protein FN3998-S Chr7 1934001 1957000 0 0 Deletion 22999 LOC_Os07g04400 expressed protein FN3998-S Chr7 1934001 1957000 0 0 Deletion 22999 LOC_Os07g04410 cytochrome P450 90C1, putative, expressed FN3998-S Chr7 1934001 1957000 0 0 Deletion 22999 LOC_Os07g04420 expressed protein FN3998-S Chr7 1937707 2152116 0 0 Inversion 0 FN3998-S Chr7 2009001 2024000 0 0 Deletion 14999 LOC_Os07g04550 pleckstrin homology domain-containing protein, putative, expressed FN3998-S Chr7 2009001 2024000 0 0 Deletion 14999 LOC_Os07g04560 no apical meristem protein, putative, expressed FN3998-S Chr7 2027401 2152124 0 0 Inversion 0 FN3998-S Chr7 28604181 28604181 0 0 Insertion 1 HET FN3998-S Chr7 4843878 4843878 0 0 Insertion 1 frameshift_variant HET LOC_Os07g09240 retrotransposon protein, putative, unclassified, expressed FN3998-S Chr8 12484542 C-G 0 0 Single Base Substitution 0 Homo FN3998-S Chr8 17877315 17877315 0 0 Insertion 1 HET FN3998-S Chr8 18745849 Chr3 18929781 0 Translocation 0 FN3998-S Chr8 24983081 Chr4 31648224 0 Translocation 0 LOC_Os04g53130 bromodomain containing protein, expressed FN3998-S Chr8 2985302 C-T 0 0 Single Base Substitution 0 HET FN3998-S Chr8 8120030 8120032 0 0 Deletion 2 Homo FN3998-S Chr9 14129024 C-T 0 0 Single Base Substitution 0 HET FN3998-S Chr9 2002675 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g03920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3998-S Chr9 2002676 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g03920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3998-S Chr9 21083296 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g36550 armadillo/beta-catenin repeat family protein, putative, expressed FN3998-S Chr9 2171228 Chr2 10775862 0 Translocation 0