FN3999-S Chr1 30295316 C-T 0 0 Single Base Substitution 0 HET FN3999-S Chr1 38701690 G-A 0 0 Single Base Substitution 0 HET FN3999-S Chr10 12195640 12216410 0 0 Inversion 0 LOC_Os10g23820 transferase family protein, putative, expressed FN3999-S Chr10 14378282 14378282 0 0 Insertion 4 frameshift_variant HET LOC_Os10g27260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3999-S Chr10 19598047 19598051 0 0 Deletion 4 Homo FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07229 dehydrogenase, putative, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07248 transposon protein, putative, unclassified, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07270 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07280 expressed protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07290 glycosyl hydrolases family 17, putative, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07310 retrotransposon protein, putative, unclassified, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07320 hypothetical protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07340 expressed protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07370 expressed protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07380 expressed protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07390 hypothetical protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07400 disease resistance RPP13-like protein 1, putative, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07410 retrotransposon protein, putative, unclassified, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07420 expressed protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07430 expressed protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07440 expressed protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07450 expressed protein FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07460 retrotransposon protein, putative, unclassified, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07470 ZOS10-01 - C2H2 zinc finger protein, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07480 plant protein of unknown function DUF869 domain containing protein, expressed FN3999-S Chr10 3792001 4001000 0 0 Deletion 208999 LOC_Os10g07510 DUF260 domain containing protein, putative, expressed FN3999-S Chr10 9140647 Chr8 696488 0 Translocation 0 LOC_Os10g18026 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3999-S Chr10 9140649 9693804 0 0 Inversion 0 LOC_Os10g18026 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3999-S Chr10 9493247 9692564 0 0 Inversion 0 FN3999-S Chr10 9493511 Chr8 696037 0 Translocation 0 FN3999-S Chr11 13434998 Chr2 8032395 0 Translocation 0 FN3999-S Chr11 16724443 Chr4 13537364 0 Translocation 0 FN3999-S Chr11 2200835 A-T 0 0 Single Base Substitution 0 HET FN3999-S Chr12 21982395 21982395 0 0 Insertion 1 HET FN3999-S Chr12 22666475 Chr6 7316864 0 Translocation 0 FN3999-S Chr12 4464576 Chr8 25261296 0 Translocation 0 LOC_Os08g39870 Os8bglu28 - beta-glucosidase homologue, similar to Os4bglu12 exoglucanase, expressed FN3999-S Chr12 4568127 4568128 0 0 Deletion 1 HET FN3999-S Chr12 7708596 7708597 0 0 Deletion 1 Homo FN3999-S Chr2 294985 A-T 0 0 Single Base Substitution 0 Homo FN3999-S Chr2 32483158 32483158 0 0 Insertion 1 HET FN3999-S Chr3 20533415 20533415 0 0 Insertion 3 HET FN3999-S Chr3 20963001 21002000 0 0 Deletion 38999 LOC_Os03g37820 expressed protein FN3999-S Chr3 20963001 21002000 0 0 Deletion 38999 LOC_Os03g37830 potassium transporter, putative, expressed FN3999-S Chr3 21924017 21924017 0 0 Insertion 3 inframe_insertion HET LOC_Os03g39450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3999-S Chr4 1787471 C-T 0 0 Single Base Substitution 0 Homo FN3999-S Chr4 8052477 8804282 0 0 Inversion 0 FN3999-S Chr5 14097629 14097630 0 0 Deletion 1 frameshift_variant HET LOC_Os05g24380 retrotransposon protein, putative, unclassified, expressed FN3999-S Chr5 20638102 Chr1 20150131 0 Translocation 0 LOC_Os05g34780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3999-S Chr5 7220292 T-G 0 0 Single Base Substitution 0 Homo FN3999-S Chr7 12283617 12283617 0 0 Insertion 4 HET FN3999-S Chr7 22913798 22913799 0 0 Deletion 1 HET FN3999-S Chr7 23806001 23825000 0 0 Deletion 18999 LOC_Os07g39720 expressed protein FN3999-S Chr7 23806001 23825000 0 0 Deletion 18999 LOC_Os07g39730 ZCW7, putative, expressed FN3999-S Chr7 23806001 23825000 0 0 Deletion 18999 LOC_Os07g39740 GDSL-like lipase/acylhydrolase, putative, expressed FN3999-S Chr7 23806001 23825000 0 0 Deletion 18999 LOC_Os07g39750 GDSL-like lipase/acylhydrolase, putative, expressed FN3999-S Chr7 23806001 23825000 0 0 Deletion 18999 LOC_Os07g39760 expressed protein FN3999-S Chr7 25340100 Chr3 31170075 0 Translocation 0 FN3999-S Chr7 26050219 26050221 0 0 Deletion 2 HET FN3999-S Chr7 2716592 A-G 0 0 Single Base Substitution 0 Homo FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12020 retrotransposon protein, putative, unclassified, expressed FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12030 hypothetical protein FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12040 hypothetical protein FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12050 expressed protein FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12080 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12090 LTPL165 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3999-S Chr7 6674001 6752000 0 0 Deletion 77999 LOC_Os07g12100 expressed protein FN3999-S Chr7 8510452 C-T 0 0 Single Base Substitution 0 HET FN3999-S Chr7 9800188 9800207 0 0 Deletion 19 frameshift_variant HET LOC_Os07g16710 retrotransposon protein, putative, Ty3-gypsy subclass FN3999-S Chr7 9894189 Chr3 13495236 0 Translocation 0 LOC_Os03g23800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3999-S Chr8 10714676 10714677 0 0 Deletion 1 HET FN3999-S Chr8 11542155 11542155 0 0 Insertion 1 HET FN3999-S Chr8 1433451 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g03130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3999-S Chr8 16637876 Chr6 1224653 0 Translocation 0 FN3999-S Chr8 16900172 16900172 0 0 Insertion 4 HET FN3999-S Chr8 2596687 C-T 0 0 Single Base Substitution 0 Homo FN3999-S Chr9 19008881 Chr4 11551106 0 Translocation 0 FN3999-S Chr9 4091276 C-T 0 0 Single Base Substitution 0 HET FN3999-S Chr9 7260586 T-C 0 0 Single Base Substitution 0 Homo