FN4001-S Chr1 29807341 G-C 0 0 Single Base Substitution 0 HET FN4001-S Chr10 15505961 T-A 0 0 Single Base Substitution 0 HET FN4001-S Chr11 11940188 G-T 0 0 Single Base Substitution 0 HET FN4001-S Chr11 22379483 22379483 0 0 Insertion 263 HET FN4001-S Chr11 26501031 T-C 0 0 Single Base Substitution 0 HET FN4001-S Chr11 26728041 26728043 0 0 Deletion 2 HET FN4001-S Chr11 27303814 G-A 0 0 Single Base Substitution 0 HET FN4001-S Chr11 4177102 T-C 0 0 Single Base Substitution 0 Homo FN4001-S Chr11 7876076 T-A 0 0 Single Base Substitution 0 HET FN4001-S Chr12 11201131 Chr8 2999198 0 Translocation 0 LOC_Os12g19304 Fe-S metabolism associated domain containing protein, expressed FN4001-S Chr12 15249413 G-A 0 0 Single Base Substitution 0 HET FN4001-S Chr12 17297408 T-G 0 0 Single Base Substitution 0 HET FN4001-S Chr12 983508 983510 0 0 Deletion 2 HET FN4001-S Chr2 1211844 G-T 0 0 Single Base Substitution 0 HET FN4001-S Chr2 14844001 14879000 0 0 Deletion 34999 LOC_Os02g25430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4001-S Chr2 14844001 14879000 0 0 Deletion 34999 LOC_Os02g25440 retrotransposon protein, putative, unclassified, expressed FN4001-S Chr2 14844001 14879000 0 0 Deletion 34999 LOC_Os02g25449 expressed protein FN4001-S Chr2 14844001 14879000 0 0 Deletion 34999 LOC_Os02g25460 transposon protein, putative, unclassified FN4001-S Chr2 14844001 14879000 0 0 Deletion 34999 LOC_Os02g25470 transposon protein, putative, unclassified, expressed FN4001-S Chr2 14844001 14879000 0 0 Deletion 34999 LOC_Os02g25480 retrotransposon protein, putative, Ty1-copia subclass FN4001-S Chr2 23462455 23462455 0 0 Insertion 1 HET FN4001-S Chr2 30304496 T-A 0 0 Single Base Substitution 0 HET FN4001-S Chr2 35569805 35569808 0 0 Deletion 3 inframe_deletion Homo LOC_Os02g58120 oxidoreductase/ transition metal ion binding protein, putative, expressed FN4001-S Chr2 5097571 5097573 0 0 Deletion 2 HET FN4001-S Chr2 6018493 6018498 0 0 Deletion 5 frameshift_variant HET LOC_Os02g11700 cytokinin-O-glucosyltransferase 3, putative, expressed FN4001-S Chr3 10198444 A-T 0 0 Single Base Substitution 0 Homo FN4001-S Chr3 11017645 A-T 0 0 Single Base Substitution 0 HET FN4001-S Chr3 11049768 11078826 0 0 Inversion 0 LOC_Os03g19650 PPR2, putative, expressed FN4001-S Chr3 11049768 11078826 0 0 Inversion 0 LOC_Os03g19690 expressed protein FN4001-S Chr3 11049773 11078872 0 0 Inversion 0 LOC_Os03g19650 PPR2, putative, expressed FN4001-S Chr3 11049773 11078872 0 0 Inversion 0 LOC_Os03g19690 expressed protein FN4001-S Chr3 12167026 T-C 0 0 Single Base Substitution 0 HET FN4001-S Chr3 23385804 G-A 0 0 Single Base Substitution 0 HET FN4001-S Chr3 27019591 A-T 0 0 Single Base Substitution 0 Homo FN4001-S Chr3 31652160 Chr1 22965030 0 Translocation 0 FN4001-S Chr3 34477201 34477202 0 0 Deletion 1 frameshift_variant Homo LOC_Os03g60650 protein phosphatase 2C, putative, expressed FN4001-S Chr3 4499841 A-T 0 0 Single Base Substitution 0 Homo FN4001-S Chr3 8742176 8742181 0 0 Deletion 5 Homo FN4001-S Chr4 12451878 12451878 0 0 Insertion 1 HET FN4001-S Chr4 13731486 13731486 0 0 Insertion 4 HET FN4001-S Chr4 13913122 C-G 0 0 Single Base Substitution 0 HET FN4001-S Chr4 19171123 19908084 0 0 Inversion 0 LOC_Os04g32010 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed FN4001-S Chr4 19171126 19908110 0 0 Inversion 0 LOC_Os04g32010 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed FN4001-S Chr4 19711090 G-A 0 0 Single Base Substitution 0 HET FN4001-S Chr4 20145685 20145688 0 0 Deletion 3 HET FN4001-S Chr4 24699676 C-T 0 0 Single Base Substitution 0 Homo FN4001-S Chr4 4714255 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g08680 retrotransposon protein, putative, unclassified, expressed FN4001-S Chr4 4801945 T-C 0 0 Single Base Substitution 0 HET FN4001-S Chr4 7871545 7871545 0 0 Insertion 8 HET FN4001-S Chr5 14449526 G-A 0 0 Single Base Substitution 0 Homo FN4001-S Chr5 15342362 15342362 0 0 Insertion 3 HET FN4001-S Chr5 21863696 21863697 0 0 Deletion 1 HET FN4001-S Chr6 25337001 25344000 0 0 Deletion 6999 LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed FN4001-S Chr6 25337001 25344000 0 0 Deletion 6999 LOC_Os06g42205 expressed protein FN4001-S Chr6 90608 G-A 0 0 Single Base Substitution 0 HET FN4001-S Chr7 12557150 G-A 0 0 Single Base Substitution 0 HET FN4001-S Chr7 14024109 C-T 0 0 Single Base Substitution 0 HET FN4001-S Chr7 9597295 9597333 0 0 Deletion 38 frameshift_variant HET LOC_Os07g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4001-S Chr7 9956931 G-A 0 0 Single Base Substitution 0 HET FN4001-S Chr8 10913923 Chr5 9160328 0 Translocation 0 FN4001-S Chr8 12577665 Chr4 2200028 0 Translocation 0 LOC_Os04g04600 retrotransposon protein, putative, Ty3-gypsy subclass FN4001-S Chr8 18372549 C-T 0 0 Single Base Substitution 0 HET FN4001-S Chr8 22301720 Chr6 13618918 0 Translocation 0 FN4001-S Chr8 7125838 Chr5 8822400 0 Translocation 0 LOC_Os05g15580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4001-S Chr8 7125838 Chr5 8822400 0 Translocation 0 LOC_Os08g12100 expressed protein FN4001-S Chr9 13203413 A-C 0 0 Single Base Substitution 0 Homo FN4001-S Chr9 1433421 1433422 0 0 Deletion 1 frameshift_variant HET LOC_Os09g03040 transposon protein, putative, CACTA, En/Spm sub-class, expressed