FN4041-S Chr1 1570593 C-G 0 0 Single Base Substitution 0 HET FN4041-S Chr1 257789 G-A 0 0 Single Base Substitution 0 HET FN4041-S Chr1 27502859 T-C 0 0 Single Base Substitution 0 HET FN4041-S Chr1 33414909 C-T 0 0 Single Base Substitution 0 HET FN4041-S Chr1 34988249 G-A 0 0 Single Base Substitution 0 Homo FN4041-S Chr1 39474690 39474691 0 0 Deletion 1 Homo FN4041-S Chr1 40315407 G-C 0 0 Single Base Substitution 0 HET FN4041-S Chr10 12860090 Chr2 16818187 0 Translocation 0 LOC_Os10g24980 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr10 13129237 C-T 0 0 Single Base Substitution 0 HET FN4041-S Chr10 3205060 3205060 0 0 Insertion 13 HET FN4041-S Chr10 7888226 7888227 0 0 Deletion 1 HET FN4041-S Chr11 11831706 Chr7 14037452 0 Translocation 0 LOC_Os07g24670 retrotransposon protein, putative, Ty3-gypsy subclass FN4041-S Chr11 14447578 14447578 0 0 Insertion 1 HET FN4041-S Chr11 19859161 Chr7 16610234 0 Translocation 0 LOC_Os11g33970 plant protein of unknown function domain containing protein, expressed FN4041-S Chr11 21558189 A-G 0 0 Single Base Substitution 0 HET FN4041-S Chr11 23371576 23371577 0 0 Deletion 1 frameshift_variant HET LOC_Os11g39250 transposon protein, putative, unclassified, expressed FN4041-S Chr11 2525469 A-G 0 0 Single Base Substitution 0 Homo FN4041-S Chr11 4308487 T-C 0 0 Single Base Substitution 0 Homo FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22145 expressed protein FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22150 transposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22160 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22170 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22180 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22190 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22200 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22210 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22220 expressed protein FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22230 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22240 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22260 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22270 expressed protein FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22284 white-brown complex homolog protein 11, putative, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22310 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22340 retrotransposon protein, putative, Ty3-gypsy subclass FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22350 retrotransposon protein, putative, Ty1-copia subclass FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22360 hypothetical protein FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22370 retrotransposon protein, putative, unclassified FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22390 retrotransposon protein, putative, Ty3-gypsy subclass FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22420 retrotransposon protein, putative, unclassified FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22430 retrotransposon protein, putative, unclassified FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22460 hypothetical protein FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22480 transposon protein, putative, unclassified, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22489 expressed protein FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22500 expressed protein FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22510 retrotransposon protein, putative, Ty3-gypsy subclass FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22530 retrotransposon, putative, centromere-specific FN4041-S Chr12 12465001 12725000 0 0 Deletion 259999 LOC_Os12g22540 retrotransposon protein, putative, Ty3-gypsy subclass FN4041-S Chr12 23131699 Chr7 4748495 0 Translocation 0 FN4041-S Chr12 4136909 Chr7 3304292 0 Translocation 0 FN4041-S Chr12 4345055 C-T 0 0 Single Base Substitution 0 HET FN4041-S Chr12 8413686 G-T 0 0 Single Base Substitution 0 HET FN4041-S Chr12 9610554 Chr10 4824280 0 Translocation 0 FN4041-S Chr2 23269230 23419703 0 0 Inversion 0 LOC_Os02g38480 expressed protein FN4041-S Chr2 23269248 23419706 0 0 Inversion 0 LOC_Os02g38480 expressed protein FN4041-S Chr2 5786139 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g10900 NB-ARC domain containing protein, expressed FN4041-S Chr2 6192791 T-C 0 0 Single Base Substitution 0 HET FN4041-S Chr3 13743458 C-A 0 0 Single Base Substitution 0 Homo FN4041-S Chr3 16956371 16956450 0 0 Deletion 79 HET FN4041-S Chr3 28124735 28124746 0 0 Deletion 11 Homo FN4041-S Chr3 3793284 G-A 0 0 Single Base Substitution 0 HET FN4041-S Chr4 21214069 G-A 0 0 Single Base Substitution 0 HET FN4041-S Chr4 21214071 T-A 0 0 Single Base Substitution 0 HET FN4041-S Chr4 21243317 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g34960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4041-S Chr4 23519536 G-A 0 0 Single Base Substitution 0 HET FN4041-S Chr4 24425172 C-T 0 0 Single Base Substitution 0 Homo FN4041-S Chr4 6933507 G-A 0 0 Single Base Substitution 0 Homo FN4041-S Chr4 9276582 T-C 0 0 Single Base Substitution 0 Homo FN4041-S Chr5 13988934 13988934 0 0 Insertion 3 HET FN4041-S Chr5 15774385 C-T 0 0 Single Base Substitution 0 HET FN4041-S Chr5 17701486 17701487 0 0 Deletion 1 frameshift_variant HET LOC_Os05g30550 retrotransposon protein, putative, unclassified, expressed FN4041-S Chr5 18221760 T-A 0 0 Single Base Substitution 0 HET FN4041-S Chr5 23391439 C-G 0 0 Single Base Substitution 0 HET FN4041-S Chr5 27402347 G-A 0 0 Single Base Substitution 0 HET FN4041-S Chr6 10286263 G-A 0 0 Single Base Substitution 0 HET FN4041-S Chr6 7143962 A-T 0 0 Single Base Substitution 0 HET FN4041-S Chr6 8735655 G-T 0 0 Single Base Substitution 0 Homo FN4041-S Chr8 12039186 12039186 0 0 Insertion 2 HET FN4041-S Chr8 12265008 G-C 0 0 Single Base Substitution 0 Homo FN4041-S Chr8 14737418 Chr7 5214800 0 Translocation 0 FN4041-S Chr8 2861073 Chr1 17634409 0 Translocation 0 LOC_Os01g32210 retrotransposon protein, putative, unclassified FN4041-S Chr8 2861073 Chr1 17634409 0 Translocation 0 LOC_Os08g05420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4041-S Chr9 3912786 G-A 0 0 Single Base Substitution 0 HET FN4041-S Chr9 4369231 A-C 0 0 Single Base Substitution 0 HET