FN4043-S Chr1 13541913 14488686 0 0 Inversion 0 LOC_Os01g24030 AMP-binding enzyme, putative, expressed FN4043-S Chr1 13541933 14199973 0 0 Inversion 0 LOC_Os01g24030 AMP-binding enzyme, putative, expressed FN4043-S Chr1 15926287 15966910 0 0 Inversion 0 LOC_Os01g28420 transposon protein, putative, CACTA, En/Spm sub-class FN4043-S Chr1 15926287 15966910 0 0 Inversion 0 LOC_Os01g28510 expressed protein FN4043-S Chr1 19179402 19179406 0 0 Deletion 4 HET FN4043-S Chr1 20333574 20333575 0 0 Deletion 1 HET FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54580 transporter family protein, putative, expressed FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54590 ras-related protein, putative, expressed FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54600 WRKY13, expressed FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54610 retrotransposon protein, putative, unclassified FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54620 CESA4 - cellulose synthase, expressed FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54630 leucine rich repeat family protein, putative, expressed FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54640 retrotransposon protein, putative, unclassified FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54650 retrotransposon protein, putative, unclassified, expressed FN4043-S Chr1 31398001 31445000 0 0 Deletion 46999 LOC_Os01g54660 retrotransposon protein, putative, unclassified, expressed FN4043-S Chr1 32311394 32311396 0 0 Deletion 2 frameshift_variant HET LOC_Os01g56120 RNA recognition motif containing protein, putative, expressed FN4043-S Chr1 8079092 A-C 0 0 Single Base Substitution 0 HET FN4043-S Chr1 9190285 9190309 0 0 Deletion 24 HET FN4043-S Chr10 13397231 C-A 0 0 Single Base Substitution 0 HET FN4043-S Chr10 19937088 19937088 0 0 Insertion 2 HET FN4043-S Chr10 3865204 3865208 0 0 Deletion 4 HET FN4043-S Chr10 3886173 G-A 0 0 Single Base Substitution 0 HET FN4043-S Chr10 5206793 5206797 0 0 Deletion 4 HET FN4043-S Chr11 11573591 G-A 0 0 Single Base Substitution 0 HET FN4043-S Chr11 4179775 4179776 0 0 Deletion 1 HET FN4043-S Chr12 17835352 17835352 0 0 Insertion 4 HET FN4043-S Chr12 18797343 G-T 0 0 Single Base Substitution 0 HET FN4043-S Chr12 24465259 T-A 0 0 Single Base Substitution 0 HET FN4043-S Chr12 25603846 T-A 0 0 Single Base Substitution 0 HET FN4043-S Chr12 7662695 7662697 0 0 Deletion 2 HET FN4043-S Chr2 1073126 A-G 0 0 Single Base Substitution 0 HET FN4043-S Chr2 14449446 G-A 0 0 Single Base Substitution 0 Homo FN4043-S Chr2 16303942 A-G 0 0 Single Base Substitution 0 HET FN4043-S Chr2 17303077 G-T 0 0 Single Base Substitution 0 HET FN4043-S Chr2 17788519 C-G 0 0 Single Base Substitution 0 HET FN4043-S Chr2 18333103 18333105 0 0 Deletion 2 HET FN4043-S Chr2 19800386 19903788 0 0 Inversion 0 FN4043-S Chr2 19800390 19958806 0 0 Inversion 0 FN4043-S Chr2 19910001 19958000 0 0 Deletion 47999 LOC_Os02g33490 inorganic H+ pyrophosphatase, putative, expressed FN4043-S Chr2 19910001 19958000 0 0 Deletion 47999 LOC_Os02g33500 threonyl-tRNA synthetase, putative, expressed FN4043-S Chr2 19910001 19958000 0 0 Deletion 47999 LOC_Os02g33510 retrotransposon protein, putative, Ty3-gypsy subclass FN4043-S Chr2 19910001 19958000 0 0 Deletion 47999 LOC_Os02g33520 retrotransposon protein, putative, unclassified, expressed FN4043-S Chr2 19910001 19958000 0 0 Deletion 47999 LOC_Os02g33530 retrotransposon protein, putative, unclassified, expressed FN4043-S Chr2 19910001 19958000 0 0 Deletion 47999 LOC_Os02g33540 translational activator family protein, putative, expressed FN4043-S Chr2 19910001 19958000 0 0 Deletion 47999 LOC_Os02g33550 harpin-induced protein 1 domain containing protein, expressed FN4043-S Chr2 21459461 21459462 0 0 Deletion 1 HET FN4043-S Chr2 30959473 A-G 0 0 Single Base Substitution 0 Homo FN4043-S Chr3 1532162 1532163 0 0 Deletion 1 Homo FN4043-S Chr3 8412776 8412777 0 0 Deletion 1 HET FN4043-S Chr4 12909035 T-G 0 0 Single Base Substitution 0 Homo FN4043-S Chr4 20493803 20494700 0 0 Inversion 0 FN4043-S Chr4 27920078 A-T 0 0 Single Base Substitution 0 Homo FN4043-S Chr4 27963533 27963546 0 0 Deletion 13 HET FN4043-S Chr4 30826370 30826389 0 0 Deletion 19 frameshift_variant&splice_region_variant Homo LOC_Os04g51950 serine/threonine-protein kinase HT1, putative, expressed FN4043-S Chr4 33135703 G-A 0 0 Single Base Substitution 0 Homo FN4043-S Chr4 34342587 G-A 0 0 Single Base Substitution 0 HET FN4043-S Chr4 9757830 T-G 0 0 Single Base Substitution 0 Homo FN4043-S Chr4 9757833 G-C 0 0 Single Base Substitution 0 Homo FN4043-S Chr5 17227409 A-T 0 0 Single Base Substitution 0 Homo FN4043-S Chr5 7263194 7263195 0 0 Deletion 1 HET FN4043-S Chr5 7849542 T-C 0 0 Single Base Substitution 0 HET FN4043-S Chr5 8272073 T-C 0 0 Single Base Substitution 0 HET FN4043-S Chr6 22873914 22873916 0 0 Deletion 2 HET FN4043-S Chr6 28346821 C-T 0 0 Single Base Substitution 0 Homo FN4043-S Chr6 7031570 7031573 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os06g12850 expressed protein FN4043-S Chr8 11921330 11921337 0 0 Deletion 7 Homo FN4043-S Chr8 20979177 20979182 0 0 Deletion 5 HET FN4043-S Chr8 20979695 C-T 0 0 Single Base Substitution 0 Homo FN4043-S Chr8 23137805 C-T 0 0 Single Base Substitution 0 HET FN4043-S Chr8 3495549 3495551 0 0 Deletion 2 HET FN4043-S Chr9 13774895 13774897 0 0 Deletion 2 HET FN4043-S Chr9 13779042 C-G 0 0 Single Base Substitution 0 HET FN4043-S Chr9 17071614 T-C 0 0 Single Base Substitution 0 Homo FN4043-S Chr9 22455912 A-G 0 0 Single Base Substitution 0 HET FN4043-S Chr9 5567642 G-C 0 0 Single Base Substitution 0 HET FN4043-S Chr9 5925545 C-A 0 0 Single Base Substitution 0 HET