FN4047-S Chr1 10896317 T-C 0 0 Single Base Substitution 0 Homo FN4047-S Chr1 12695197 12695202 0 0 Deletion 5 HET FN4047-S Chr1 33181602 33181603 0 0 Deletion 1 Homo FN4047-S Chr1 33908789 33908801 0 0 Deletion 12 HET FN4047-S Chr1 36625302 C-T 0 0 Single Base Substitution 0 Homo FN4047-S Chr1 43239823 C-A 0 0 Single Base Substitution 0 Homo FN4047-S Chr1 6385001 6398000 0 0 Deletion 12999 LOC_Os01g11810 powdery mildew resistant protein 5, putative, expressed FN4047-S Chr1 6385001 6398000 0 0 Deletion 12999 LOC_Os01g11820 expressed protein FN4047-S Chr1 6385001 6398000 0 0 Deletion 12999 LOC_Os01g11830 oryzain alpha chain precursor, putative, expressed FN4047-S Chr1 7775549 7876037 0 0 Inversion 0 FN4047-S Chr1 9107656 9107665 0 0 Deletion 9 HET FN4047-S Chr10 2993836 G-A 0 0 Single Base Substitution 0 HET FN4047-S Chr11 17414676 G-A 0 0 Single Base Substitution 0 Homo FN4047-S Chr11 28201140 Chr9 8845342 0 Translocation 0 LOC_Os09g14840 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr11 28201140 Chr9 8845342 0 Translocation 0 LOC_Os11g46920 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr11 581708 Chr9 19096993 0 Translocation 0 FN4047-S Chr12 12748236 12748262 0 0 Deletion 26 frameshift_variant HET LOC_Os12g22590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr12 19478858 19736475 0 0 Inversion 0 LOC_Os12g32690 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32680 NB-ARC domain containing protein, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32690 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32700 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32710 NB-ARC domain containing protein, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32720 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32730 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32740 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32750 flavin monooxygenase, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32760 transporter family protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32770 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32790 disease resistance RPP13-like protein 1, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32810 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32814 pleiotropic drug resistance protein 3, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32820 pleiotropic drug resistance protein 3, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32840 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32850 cytochrome P450, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32870 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32880 plant protein of unknown function domain containing protein, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32900 plant protein of unknown function domain containing protein, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32910 hypothetical protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32920 plant protein of unknown function domain containing protein, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32930 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32940 transporter family protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32950 membrane protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32960 LTPL148 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32970 membrane associated DUF588 domain containing protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32980 potyvirus VPg interacting protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32986 heat shock protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g32992 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33000 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33010 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33020 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33030 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33040 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33060 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33070 myb-like DNA-binding domain containing protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33080 2-oxoglutarate/malate translocator, chloroplast precursor, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33090 zinc finger family protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33100 guanylate kinase, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33110 hypothetical protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33120 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33130 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33140 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33150 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33160 RGH1A, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33165 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33170 retrotransposon protein, putative, unclassified FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33180 pnn protein, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33194 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33210 OsFBL59 - F-box domain and LRR containing protein, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33220 F-box/LRR-repeat protein 14, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33230 OsFBL60 - F-box domain and LRR containing protein, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33240 mitochondrial ribosomal protein S10, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33250 ligA, putative, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33270 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33280 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33289 expressed protein FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33300 integral membrane protein DUF6 containing protein, expressed FN4047-S Chr12 19730001 20159000 0 0 Deletion 428999 LOC_Os12g33320 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33350 retrotransposon protein, putative, unclassified FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33370 retrotransposon protein, putative, Ty3-gypsy subclass FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33390 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33415 expressed protein FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33420 transposon protein, putative, CACTA, En/Spm sub-class FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33434 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33460 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33470 expressed protein FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33480 retrotransposon, putative, centromere-specific, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33490 retrotransposon, putative, centromere-specific, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33500 retrotransposon, putative, centromere-specific, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33510 retrotransposon, putative, centromere-specific FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33520 retrotransposon, putative, centromere-specific, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33540 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33550 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33560 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33570 retrotransposon protein, putative, unclassified FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33590 hypothetical protein FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33600 expressed protein FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33610 phenylalanine ammonia-lyase, putative, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33620 transposon protein, putative, CACTA, En/Spm sub-class FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33630 retrotransposon, putative, centromere-specific, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33640 retrotransposon, putative, centromere-specific, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33650 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33660 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr12 20169001 20330000 0 0 Deletion 160999 LOC_Os12g33670 retrotransposon protein, putative, unclassified FN4047-S Chr12 21070179 A-G 0 0 Single Base Substitution 0 HET FN4047-S Chr12 26182182 26182192 0 0 Deletion 10 HET FN4047-S Chr12 2668803 2668813 0 0 Deletion 10 Homo FN4047-S Chr12 26751974 G-A 0 0 Single Base Substitution 0 Homo FN4047-S Chr12 4337467 T-C 0 0 Single Base Substitution 0 Homo FN4047-S Chr2 26509382 26509396 0 0 Deletion 14 Homo FN4047-S Chr2 35073305 C-A 0 0 Single Base Substitution 0 Homo FN4047-S Chr3 19836713 C-T 0 0 Single Base Substitution 0 HET FN4047-S Chr3 36204771 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g64070 uncharacterized protein PA4923, putative, expressed FN4047-S Chr3 9016854 G-A 0 0 Single Base Substitution 0 HET FN4047-S Chr4 14329374 T-C 0 0 Single Base Substitution 0 HET FN4047-S Chr4 23582279 G-A 0 0 Single Base Substitution 0 HET FN4047-S Chr4 35113097 T-A 0 0 Single Base Substitution 0 HET FN4047-S Chr4 7379172 T-A 0 0 Single Base Substitution 0 HET FN4047-S Chr5 14070494 14070496 0 0 Deletion 2 Homo FN4047-S Chr5 17541222 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g30270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr5 194174 194182 0 0 Deletion 8 HET FN4047-S Chr5 2291763 G-A 0 0 Single Base Substitution 0 HET FN4047-S Chr5 27633651 27633652 0 0 Deletion 1 HET FN4047-S Chr6 10540140 Chr5 11349505 0 Translocation 0 LOC_Os05g19530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr6 10540140 Chr5 11349505 0 Translocation 0 LOC_Os06g18100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr6 12165190 12165190 0 0 Insertion 1 HET FN4047-S Chr6 14147695 14147695 0 0 Insertion 1 splice_acceptor_variant&intron_variant HET LOC_Os06g24170 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4047-S Chr6 15598901 G-A 0 0 Single Base Substitution 0 Homo FN4047-S Chr6 21576303 Chr1 15444226 0 Translocation 0 LOC_Os06g36690 retrotransposon protein, putative, unclassified FN4047-S Chr6 27857303 27857304 0 0 Deletion 1 HET FN4047-S Chr6 3136749 3136759 0 0 Deletion 10 frameshift_variant HET LOC_Os06g06680 expressed protein FN4047-S Chr7 11986830 11986833 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os07g20720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4047-S Chr8 10982530 A-G 0 0 Single Base Substitution 0 Homo FN4047-S Chr8 11012496 11012505 0 0 Deletion 9 HET FN4047-S Chr8 11209419 11210414 0 0 Deletion 995 stop_lost&inframe_deletion&splice_region_variant HET LOC_Os08g18780 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr8 11790132 A-G 0 0 Single Base Substitution 0 Homo FN4047-S Chr8 16898110 16898110 0 0 Insertion 248 HET FN4047-S Chr8 19817422 T-C 0 0 Single Base Substitution 0 Homo FN4047-S Chr8 20213696 20213704 0 0 Deletion 8 Homo FN4047-S Chr8 22748765 A-C 0 0 Single Base Substitution 0 HET FN4047-S Chr8 25750590 G-C 0 0 Single Base Substitution 0 Homo FN4047-S Chr8 25750591 C-T 0 0 Single Base Substitution 0 Homo FN4047-S Chr8 26743122 26743129 0 0 Deletion 7 Homo FN4047-S Chr8 4304534 4304541 0 0 Deletion 7 frameshift_variant Homo LOC_Os08g07700 AP2 domain containing protein, expressed FN4047-S Chr9 11247835 G-A 0 0 Single Base Substitution 0 Homo FN4047-S Chr9 14633705 C-T 0 0 Single Base Substitution 0 Homo FN4047-S Chr9 19519747 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g32730 zinc finger, C3HC4 type domain containing protein, expressed FN4047-S Chr9 19519748 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g32730 zinc finger, C3HC4 type domain containing protein, expressed FN4047-S Chr9 1979935 2319792 0 0 Inversion 0 LOC_Os09g03870 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr9 1979935 2319792 0 0 Inversion 0 LOC_Os09g04380 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr9 1979938 2319800 0 0 Inversion 0 LOC_Os09g03870 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr9 1979938 2319800 0 0 Inversion 0 LOC_Os09g04380 retrotransposon protein, putative, unclassified, expressed FN4047-S Chr9 22079922 G-C 0 0 Single Base Substitution 0 HET