FN4077-S Chr1 13655319 14515995 0 0 Inversion 0 FN4077-S Chr1 13655331 14460388 0 0 Inversion 0 LOC_Os01g25510 alpha-amylase isozyme C, putative, expressed FN4077-S Chr1 14459945 A-T 0 0 Single Base Substitution 0 Homo FN4077-S Chr1 23803445 23803445 0 0 Insertion 3 HET FN4077-S Chr1 26931290 G-A 0 0 Single Base Substitution 0 Homo FN4077-S Chr1 28575831 T-C 0 0 Single Base Substitution 0 Homo FN4077-S Chr1 28684554 G-A 0 0 Single Base Substitution 0 HET FN4077-S Chr1 37594004 C-T 0 0 Single Base Substitution 0 HET FN4077-S Chr1 42314039 G-C 0 0 Single Base Substitution 0 HET FN4077-S Chr1 6944843 A-T 0 0 Single Base Substitution 0 HET FN4077-S Chr1 6944844 T-A 0 0 Single Base Substitution 0 HET FN4077-S Chr10 5117760 G-T 0 0 Single Base Substitution 0 Homo FN4077-S Chr10 5117761 C-G 0 0 Single Base Substitution 0 Homo FN4077-S Chr10 530228 530230 0 0 Deletion 2 HET FN4077-S Chr11 18606541 18606546 0 0 Deletion 5 HET FN4077-S Chr11 18609277 19143657 0 0 Inversion 0 LOC_Os11g31740 expressed protein FN4077-S Chr11 18609277 19143657 0 0 Inversion 0 LOC_Os11g32420 transposon protein, putative, unclassified, expressed FN4077-S Chr11 22690117 Chr3 11914698 0 Translocation 0 FN4077-S Chr11 5306284 C-T 0 0 Single Base Substitution 0 Homo FN4077-S Chr11 8121613 8121661 0 0 Deletion 48 disruptive_inframe_deletion Homo LOC_Os11g14460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4077-S Chr12 4788930 Chr1 16147142 0 Translocation 0 LOC_Os01g28830 expressed protein FN4077-S Chr2 1506963 1506963 0 0 Insertion 1 HET FN4077-S Chr2 19010227 19010228 0 0 Deletion 1 frameshift_variant Homo LOC_Os02g32180 expressed protein FN4077-S Chr2 32030635 C-T 0 0 Single Base Substitution 0 Homo FN4077-S Chr3 11869700 T-C 0 0 Single Base Substitution 0 HET FN4077-S Chr3 25325290 C-T 0 0 Single Base Substitution 0 HET FN4077-S Chr3 2709331 2709332 0 0 Deletion 1 Homo FN4077-S Chr3 31983429 31983438 0 0 Deletion 9 HET FN4077-S Chr4 12162934 12162934 0 0 Insertion 4 HET FN4077-S Chr4 17592734 17592735 0 0 Deletion 1 HET FN4077-S Chr4 32922332 32922345 0 0 Deletion 13 Homo FN4077-S Chr5 10270461 Chr1 6257231 0 Translocation 0 FN4077-S Chr5 12908601 Chr1 23088558 0 Translocation 0 LOC_Os01g40830 transposon protein, putative, Mutator sub-class, expressed FN4077-S Chr5 12910185 Chr1 20403988 0 Translocation 0 FN4077-S Chr5 15961755 15961756 0 0 Deletion 1 frameshift_variant Homo LOC_Os05g27450 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4077-S Chr5 19835409 G-A 0 0 Single Base Substitution 0 HET FN4077-S Chr5 28030717 G-A 0 0 Single Base Substitution 0 Homo FN4077-S Chr6 11144550 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g19570 expressed protein FN4077-S Chr6 23516344 Chr5 5212207 0 Translocation 0 LOC_Os05g09330 transposon protein, putative, CACTA, En/Spm sub-class FN4077-S Chr7 12938685 12938687 0 0 Deletion 2 frameshift_variant HET LOC_Os07g22960 retrotransposon protein, putative, unclassified, expressed FN4077-S Chr7 15813871 16378727 0 0 Inversion 0 LOC_Os07g27210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4077-S Chr7 15813871 16378727 0 0 Inversion 0 LOC_Os07g28090 ABC transporter, ATP-binding protein, putative, expressed FN4077-S Chr7 15813877 16515393 0 0 Inversion 0 LOC_Os07g27210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4077-S Chr7 15813877 16515393 0 0 Inversion 0 LOC_Os07g28260 expressed protein FN4077-S Chr7 15894650 15894651 0 0 Deletion 1 Homo FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28090 ABC transporter, ATP-binding protein, putative, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28100 hypothetical protein FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28110 cytochrome P450, putative, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28120 retrotransposon protein, putative, unclassified, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28130 transposon protein, putative, unclassified, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28140 cytochrome P450, putative, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28150 hAT dimerisation domain containing protein, putative, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28160 cytochrome P450 51, putative, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28170 expressed protein FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28180 expressed protein FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28210 retrotransposon protein, putative, unclassified, expressed FN4077-S Chr7 16379001 16483000 0 0 Deletion 103999 LOC_Os07g28220 transposon protein, putative, CACTA, En/Spm sub-class FN4077-S Chr7 19416460 Chr1 34821287 0 Translocation 0 FN4077-S Chr7 232219 232219 0 0 Insertion 1 HET FN4077-S Chr7 24329270 C-T 0 0 Single Base Substitution 0 HET FN4077-S Chr7 28607191 T-C 0 0 Single Base Substitution 0 HET FN4077-S Chr7 6002713 Chr4 32327160 0 Translocation 0 LOC_Os07g10950 expressed protein FN4077-S Chr8 13873004 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g23050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4077-S Chr8 21060892 A-C 0 0 Single Base Substitution 0 Homo FN4077-S Chr8 23461108 23461108 0 0 Insertion 33 disruptive_inframe_insertion HET LOC_Os08g37120 transposon protein, putative, unclassified, expressed FN4077-S Chr8 27224000 27224012 0 0 Deletion 12 HET FN4077-S Chr9 11141568 11141583 0 0 Deletion 15 HET FN4077-S Chr9 19232108 T-C 0 0 Single Base Substitution 0 HET FN4077-S Chr9 6936772 Chr1 3000521 0 Translocation 0 LOC_Os01g06310 glycine-rich cell wall structural protein precursor, putative, expressed FN4077-S Chr9 8066354 C-T 0 0 Single Base Substitution 0 Homo