FN4078-S Chr1 35957355 36128262 0 0 Inversion 0 LOC_Os01g62410 MYB family transcription factor, putative, expressed FN4078-S Chr1 35957361 36128263 0 0 Inversion 0 LOC_Os01g62410 MYB family transcription factor, putative, expressed FN4078-S Chr1 36735198 36735200 0 0 Deletion 2 HET FN4078-S Chr10 12472073 12472073 0 0 Insertion 1 HET FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31180 hypothetical protein FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31189 retrotransposon protein, putative, Ty1-copia subclass FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31200 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31220 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31240 plant protein of unknown function domain containing protein, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31250 expressed protein FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31280 expressed protein FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31290 expressed protein FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31300 expressed protein FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31310 transposon protein, putative, unclassified, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31320 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31330 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31340 retrotransposon protein, putative, unclassified FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31350 transposon protein, putative, Mutator sub-class, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31360 GRF zinc finger family protein, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31370 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31380 glycine-rich cell wall structural protein 2 precursor, putative, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31390 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr10 16334001 16475000 0 0 Deletion 140999 LOC_Os10g31400 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr10 17343583 17678314 0 0 Inversion 0 FN4078-S Chr10 17437787 17677497 0 0 Inversion 0 LOC_Os10g33240 expressed protein FN4078-S Chr10 17437787 17677497 0 0 Inversion 0 LOC_Os10g33530 alcohol oxidase-related, putative, expressed FN4078-S Chr10 20602291 G-A 0 0 Single Base Substitution 0 Homo FN4078-S Chr10 6426461 A-G 0 0 Single Base Substitution 0 HET FN4078-S Chr11 16229236 G-T 0 0 Single Base Substitution 0 HET FN4078-S Chr11 17285958 C-T 0 0 Single Base Substitution 0 HET FN4078-S Chr11 19385805 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g32810 Leucine Rich Repeat family protein, expressed FN4078-S Chr11 20783228 T-A 0 0 Single Base Substitution 0 Homo FN4078-S Chr11 4122867 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g07950 expressed protein FN4078-S Chr11 5529266 T-A 0 0 Single Base Substitution 0 HET FN4078-S Chr11 8327685 C-A 0 0 Single Base Substitution 0 Homo FN4078-S Chr12 11689811 11689811 0 0 Insertion 5 HET FN4078-S Chr12 1562347 1562355 0 0 Deletion 8 HET FN4078-S Chr12 20680992 20680992 0 0 Insertion 3 HET FN4078-S Chr12 6792488 6792489 0 0 Deletion 1 Homo FN4078-S Chr2 2309454 2605967 0 0 Inversion 0 FN4078-S Chr2 2309458 2605969 0 0 Inversion 0 FN4078-S Chr2 23462455 23462455 0 0 Insertion 1 HET FN4078-S Chr2 27517627 G-C 0 0 Single Base Substitution 0 Homo FN4078-S Chr2 32483158 32483158 0 0 Insertion 1 HET FN4078-S Chr2 9353291 9353314 0 0 Deletion 23 HET FN4078-S Chr3 14005514 T-C 0 0 Single Base Substitution 0 Homo FN4078-S Chr3 16449147 Chr2 28715218 0 Translocation 0 FN4078-S Chr3 29761887 Chr1 9052690 0 Translocation 0 FN4078-S Chr3 30788229 30788229 0 0 Insertion 2 HET FN4078-S Chr3 31155632 31387149 0 0 Inversion 0 LOC_Os03g55140 transducin family protein, putative, expressed FN4078-S Chr3 31173915 31387136 0 0 Inversion 0 LOC_Os03g54840 hypothetical protein FN4078-S Chr3 31173915 31387136 0 0 Inversion 0 LOC_Os03g55140 transducin family protein, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56110 homeobox protein knotted-1, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56120 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56130 lichenase-2 precursor, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56140 homeobox protein rough sheath 1, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56160 lectin-like receptor kinase 7, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56170 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56180 legume lectins beta domain containing protein, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56190 cytochrome c oxidase-related, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56200 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56220 stress-induced protein, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56234 myb/SANT domain protein, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56241 40S ribosomal protein S29, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56250 LRR receptor-like protein kinase, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56260 kinesin motor domain containing protein, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56270 receptor protein kinase CLAVATA1 precursor, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56280 lactate/malate dehydrogenase, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56290 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56300 4Fe-4S binding domain containing protein, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56310 5-nucleotidase domain-containing protein, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56320 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56330 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56340 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56350 hypothetical protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56360 transposon protein, putative, unclassified, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56370 methyltransferase, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56380 methyltransferase, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56390 tRNA wybutosine-synthesizing protein 1, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56400 pentatricopeptide, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56410 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56420 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56430 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56440 OsFBX110 - F-box domain containing protein, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56450 OsFBX111 - F-box domain containing protein, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56460 glucose-6-phosphate isomerase, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56470 protein kinase family protein, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56480 expressed protein FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56490 DNA topoisomerase IV subunit A, putative, expressed FN4078-S Chr3 31963001 32196000 0 0 Deletion 232999 LOC_Os03g56500 expressed protein FN4078-S Chr3 33150749 G-C 0 0 Single Base Substitution 0 HET FN4078-S Chr3 34107322 C-A 0 0 Single Base Substitution 0 HET FN4078-S Chr3 7129959 C-T 0 0 Single Base Substitution 0 Homo FN4078-S Chr3 9299635 A-G 0 0 Single Base Substitution 0 HET FN4078-S Chr4 12677895 G-A 0 0 Single Base Substitution 0 Homo FN4078-S Chr4 17079985 17869576 0 0 Inversion 0 FN4078-S Chr4 195731 A-T 0 0 Single Base Substitution 0 HET FN4078-S Chr4 21680455 A-T 0 0 Single Base Substitution 0 Homo FN4078-S Chr4 21699147 G-A 0 0 Single Base Substitution 0 Homo FN4078-S Chr4 27441010 G-T 0 0 Single Base Substitution 0 Homo FN4078-S Chr4 27761496 27761819 0 0 Inversion 0 FN4078-S Chr4 28148801 28148803 0 0 Deletion 2 Homo FN4078-S Chr4 30425406 A-C 0 0 Single Base Substitution 0 HET FN4078-S Chr4 34999709 A-G 0 0 Single Base Substitution 0 HET FN4078-S Chr4 5830880 G-A 0 0 Single Base Substitution 0 Homo FN4078-S Chr4 6001900 A-G 0 0 Single Base Substitution 0 Homo FN4078-S Chr5 17074159 T-G 0 0 Single Base Substitution 0 Homo FN4078-S Chr5 21606051 21606053 0 0 Deletion 2 HET FN4078-S Chr5 28313623 29217448 0 0 Inversion 0 LOC_Os05g50910 extra-large G-protein-related, putative, expressed FN4078-S Chr5 28313628 29217465 0 0 Inversion 0 LOC_Os05g50910 extra-large G-protein-related, putative, expressed FN4078-S Chr5 5345615 G-T 0 0 Single Base Substitution 0 Homo FN4078-S Chr5 7530921 7530921 0 0 Insertion 2 frameshift_variant Homo LOC_Os05g13570 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr6 2670685 A-T 0 0 Single Base Substitution 0 HET FN4078-S Chr6 6823153 Chr4 27350777 0 Translocation 0 LOC_Os06g12590 protein kinase, putative, expressed FN4078-S Chr7 26180484 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g43750 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr7 2907200 T-C 0 0 Single Base Substitution 0 HET FN4078-S Chr8 11834601 C-G 0 0 Single Base Substitution 0 HET FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34020 exostosin family domain containing protein, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34030 expressed protein FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34040 expressed protein FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34050 phosphofructokinase, putative, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34060 DUF1336 domain containing protein, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34070 DCN1, putative, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34080 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34090 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34100 conserved hypothetical protein FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34110 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34120 expressed protein FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34130 mitochondrial glycoprotein, putative, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34140 vesicle transport v-SNARE protein, putative, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34150 OsTIL-2 Temperature-induced lipocalin-2, expressed FN4078-S Chr8 21311001 21416000 0 0 Deletion 104999 LOC_Os08g34160 CAF1 family ribonuclease containing protein, putative, expressed FN4078-S Chr8 3232481 3232481 0 0 Insertion 3 HET FN4078-S Chr8 8359394 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class FN4078-S Chr8 8743049 8743052 0 0 Deletion 3 inframe_deletion HET LOC_Os08g14540 retrotransposon protein, putative, unclassified, expressed FN4078-S Chr9 9574146 Chr1 6539000 0 Translocation 0