FN4087-S Chr1 10353457 A-G 0 0 Single Base Substitution 0 Homo FN4087-S Chr1 16090866 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g28740 transposon protein, putative, unclassified, expressed FN4087-S Chr1 22806235 A-T 0 0 Single Base Substitution 0 Homo FN4087-S Chr1 27117306 C-A 0 0 Single Base Substitution 0 Homo FN4087-S Chr1 29009576 29009601 0 0 Deletion 25 HET FN4087-S Chr1 29862972 29862972 0 0 Insertion 1 HET FN4087-S Chr1 33015685 33015686 0 0 Deletion 1 HET FN4087-S Chr1 35934243 35934243 0 0 Insertion 5 HET FN4087-S Chr1 41615973 41615973 0 0 Insertion 1 HET FN4087-S Chr1 5995170 C-T 0 0 Single Base Substitution 0 Homo FN4087-S Chr10 1220827 1220828 0 0 Deletion 1 frameshift_variant HET LOC_Os10g02960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4087-S Chr10 1528228 T-G 0 0 Single Base Substitution 0 HET FN4087-S Chr10 1675732 1675732 0 0 Insertion 37 HET FN4087-S Chr10 21248873 Chr5 1803497 0 Translocation 0 FN4087-S Chr10 8253274 8253275 0 0 Deletion 1 HET FN4087-S Chr11 10003604 C-T 0 0 Single Base Substitution 0 HET FN4087-S Chr11 13443580 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g23770 cysteine protease, putative, expressed FN4087-S Chr11 15422684 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g26850 erythronate-4-phosphate dehydrogenase, putative, expressed FN4087-S Chr11 16669842 Chr7 28487475 0 Translocation 0 FN4087-S Chr11 18013157 C-T 0 0 Single Base Substitution 0 HET FN4087-S Chr11 3958092 3958093 0 0 Deletion 1 HET FN4087-S Chr11 4780578 4780581 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os11g09000 transposon protein, putative, unclassified FN4087-S Chr11 9701675 9701677 0 0 Deletion 2 HET FN4087-S Chr12 11336483 11336483 0 0 Insertion 1 HET FN4087-S Chr12 11832536 Chr3 15245441 0 Translocation 0 LOC_Os03g26704 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4087-S Chr12 11832536 Chr3 15245441 0 Translocation 0 LOC_Os12g20270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4087-S Chr12 17115290 17115290 0 0 Insertion 1 HET FN4087-S Chr12 7125610 Chr3 4034743 0 Translocation 0 FN4087-S Chr12 9384155 9384156 0 0 Deletion 1 frameshift_variant HET LOC_Os12g16390 retrotransposon protein, putative, unclassified, expressed FN4087-S Chr2 15052777 C-T 0 0 Single Base Substitution 0 HET FN4087-S Chr2 28160124 28160129 0 0 Deletion 5 Homo FN4087-S Chr2 28676300 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g46962 VHS and GAT domain containing protein, expressed FN4087-S Chr2 9350678 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4087-S Chr3 18024623 A-G 0 0 Single Base Substitution 0 HET FN4087-S Chr3 23674589 23674589 0 0 Insertion 1 HET FN4087-S Chr3 24130566 24130566 0 0 Insertion 4 HET FN4087-S Chr3 6786991 Chr1 14175836 0 Translocation 0 LOC_Os03g12720 expressed protein FN4087-S Chr3 7427741 G-A 0 0 Single Base Substitution 0 HET FN4087-S Chr4 32929509 33065912 0 0 Inversion 0 LOC_Os04g55555 retrotransposon protein, putative, unclassified, expressed FN4087-S Chr4 3350476 3350499 0 0 Deletion 23 HET FN4087-S Chr4 34407048 C-T 0 0 Single Base Substitution 0 HET FN4087-S Chr4 34407049 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g57770 expressed protein FN4087-S Chr4 7704066 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g13810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4087-S Chr5 13988934 13988934 0 0 Insertion 3 HET FN4087-S Chr5 20220797 20220797 0 0 Insertion 1 HET FN4087-S Chr5 5108442 A-G 0 0 Single Base Substitution 0 Homo FN4087-S Chr6 14031752 Chr3 12503655 0 Translocation 0 FN4087-S Chr6 28012538 C-T 0 0 Single Base Substitution 0 HET FN4087-S Chr6 3585449 T-C 0 0 Single Base Substitution 0 HET FN4087-S Chr6 9473710 Chr3 16475641 0 Translocation 0 LOC_Os03g29020 transposon protein, putative, CACTA, En/Spm sub-class FN4087-S Chr7 18847886 G-A 0 0 Single Base Substitution 0 HET FN4087-S Chr7 1891137 C-T 0 0 Single Base Substitution 0 HET FN4087-S Chr7 25429851 C-T 0 0 Single Base Substitution 0 Homo FN4087-S Chr7 26201279 Chr1 36918382 0 Translocation 0 LOC_Os01g63660 retrotransposon protein, putative, Ty3-gypsy subclass FN4087-S Chr7 26201279 Chr1 36918382 0 Translocation 0 LOC_Os07g43790 retrotransposon protein, putative, unclassified, expressed FN4087-S Chr8 11025045 Chr5 986687 0 Translocation 0 LOC_Os05g02740 expressed protein FN4087-S Chr8 12522410 C-T 0 0 Single Base Substitution 0 HET FN4087-S Chr8 12522411 T-A 0 0 Single Base Substitution 0 HET FN4087-S Chr8 6733738 Chr2 2417820 0 Translocation 0 FN4087-S Chr9 10162636 10162637 0 0 Deletion 1 Homo FN4087-S Chr9 12941791 13702453 0 0 Inversion 0 LOC_Os09g21420 transposon protein, putative, unclassified, expressed FN4087-S Chr9 13076612 G-T 0 0 Single Base Substitution 0 HET FN4087-S Chr9 13620420 13702444 0 0 Inversion 0 FN4087-S Chr9 13620442 14402266 0 0 Inversion 0 FN4087-S Chr9 20928654 G-T 0 0 Single Base Substitution 0 HET FN4087-S Chr9 4886230 A-G 0 0 Single Base Substitution 0 Homo FN4087-S Chr9 7836052 Chr5 10185767 0 Translocation 0