FN4116-S Chr1 16043739 G-A 0 0 Single Base Substitution 0 HET FN4116-S Chr1 17261873 17261873 0 0 Insertion 2 HET FN4116-S Chr1 20726175 G-A 0 0 Single Base Substitution 0 HET FN4116-S Chr1 2710363 T-A 0 0 Single Base Substitution 0 Homo FN4116-S Chr1 35558574 G-A 0 0 Single Base Substitution 0 Homo FN4116-S Chr1 35563158 35563170 0 0 Deletion 12 Homo FN4116-S Chr1 37070894 37070894 0 0 Insertion 1 frameshift_variant Homo LOC_Os01g63890 G10 protein, putative, expressed FN4116-S Chr10 1170481 C-A 0 0 Single Base Substitution 0 HET FN4116-S Chr10 20067932 20067934 0 0 Deletion 2 Homo FN4116-S Chr10 885218 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g02420 retrotransposon protein, putative, unclassified, expressed FN4116-S Chr10 9568712 T-A 0 0 Single Base Substitution 0 HET FN4116-S Chr10 9568713 G-T 0 0 Single Base Substitution 0 HET FN4116-S Chr11 10845900 C-T 0 0 Single Base Substitution 0 Homo FN4116-S Chr11 11179822 G-A 0 0 Single Base Substitution 0 Homo FN4116-S Chr11 22995454 Chr10 21784070 0 Translocation 0 FN4116-S Chr11 23104828 23104830 0 0 Deletion 2 HET FN4116-S Chr11 23724653 Chr4 5910471 0 Translocation 0 FN4116-S Chr12 10696599 T-G 0 0 Single Base Substitution 0 HET FN4116-S Chr12 16432877 C-T 0 0 Single Base Substitution 0 HET FN4116-S Chr12 1666276 Chr4 13119495 0 Translocation 0 LOC_Os12g04010 M-phase phosphoprotein 10, putative, expressed FN4116-S Chr12 19723919 G-A 0 0 Single Base Substitution 0 HET FN4116-S Chr12 21886140 G-A 0 0 Single Base Substitution 0 Homo FN4116-S Chr12 2551474 2912730 0 0 Inversion 0 FN4116-S Chr12 4435702 Chr4 8894587 0 Translocation 0 LOC_Os04g16360 retrotransposon protein, putative, Ty3-gypsy subclass FN4116-S Chr2 1520289 1520294 0 0 Deletion 5 Homo FN4116-S Chr2 20888879 A-G 0 0 Single Base Substitution 0 HET FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43050 kinesin motor domain containing protein, expressed FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43060 retrotransposon protein, putative, Ty1-copia subclass FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43070 retrotransposon protein, putative, unclassified, expressed FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43080 PPR repeat domain containing protein, putative, expressed FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43090 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43100 expressed protein FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43110 sodium/calcium exchanger 1 precursor, putative, expressed FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43120 zinc finger, C3HC4 type domain containing protein, expressed FN4116-S Chr2 25919001 25979000 0 0 Deletion 59999 LOC_Os02g43130 kinesin motor domain containing protein, expressed FN4116-S Chr2 26392004 C-T 0 0 Single Base Substitution 0 Homo FN4116-S Chr2 3426749 G-C 0 0 Single Base Substitution 0 HET FN4116-S Chr3 13614419 13614420 0 0 Deletion 1 Homo FN4116-S Chr3 13620744 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g24010 retrotransposon protein, putative, unclassified, expressed FN4116-S Chr3 13630457 G-A 0 0 Single Base Substitution 0 Homo FN4116-S Chr3 21387216 21387216 0 0 Insertion 1 frameshift_variant HET LOC_Os03g38530 transposon protein, putative, unclassified, expressed FN4116-S Chr3 24381431 T-A 0 0 Single Base Substitution 0 Homo FN4116-S Chr3 31125794 31327628 0 0 Inversion 0 LOC_Os03g54750 COBRA-like 3 protein precursor, putative, expressed FN4116-S Chr3 31125836 31327639 0 0 Inversion 0 LOC_Os03g54750 COBRA-like 3 protein precursor, putative, expressed FN4116-S Chr3 8429540 8429541 0 0 Deletion 1 HET FN4116-S Chr4 24485332 24485335 0 0 Deletion 3 Homo FN4116-S Chr4 3306232 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g06320 retrotransposon, putative, centromere-specific, expressed FN4116-S Chr4 8366034 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g14870 retrotransposon protein, putative, unclassified FN4116-S Chr5 21904530 T-A 0 0 Single Base Substitution 0 Homo FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g22990 expressed protein FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23010 conserved hypothetical protein FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23020 expressed protein FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23030 ZF-HD protein dimerisation region containing protein, expressed FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23040 expressed protein FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23050 expressed protein FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23060 DEFL11 - Defensin and Defensin-like DEFL family FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23080 retrotransposon protein, putative, unclassified, expressed FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23090 retrotransposon protein, putative, unclassified, expressed FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23100 expressed protein FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23114 copper methylamine oxidase precursor, putative, expressed FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23130 retrotransposon protein, putative, unclassified, expressed FN4116-S Chr6 13419001 13502000 0 0 Deletion 82999 LOC_Os06g23140 copper methylamine oxidase precursor, putative, expressed FN4116-S Chr6 13575829 13575829 0 0 Insertion 4 HET FN4116-S Chr6 19900421 19900430 0 0 Deletion 9 Homo FN4116-S Chr6 2616834 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g05780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4116-S Chr6 7746973 A-T 0 0 Single Base Substitution 0 HET FN4116-S Chr6 7750222 G-T 0 0 Single Base Substitution 0 HET FN4116-S Chr7 18226425 G-A 0 0 Single Base Substitution 0 HET FN4116-S Chr7 19872431 G-A 0 0 Single Base Substitution 0 HET FN4116-S Chr7 4124573 4124573 0 0 Insertion 2 HET FN4116-S Chr7 7714287 7714296 0 0 Deletion 9 Homo FN4116-S Chr8 15812435 15812460 0 0 Deletion 25 Homo FN4116-S Chr8 15975769 15975770 0 0 Deletion 1 Homo FN4116-S Chr8 2142075 G-A 0 0 Single Base Substitution 0 HET FN4116-S Chr8 22120253 Chr6 5949615 0 Translocation 0 FN4116-S Chr8 22120468 Chr6 5949613 0 Translocation 0 FN4116-S Chr8 23529154 23529155 0 0 Deletion 1 HET FN4116-S Chr8 27835798 T-G 0 0 Single Base Substitution 0 HET FN4116-S Chr9 15427872 G-A 0 0 Single Base Substitution 0 Homo FN4116-S Chr9 6931919 C-T 0 0 Single Base Substitution 0 HET FN4116-S Chr9 6931920 G-T 0 0 Single Base Substitution 0 HET FN4116-S Chr9 9126691 C-T 0 0 Single Base Substitution 0 HET