FN4129-S Chr1 16993796 17540891 0 0 Inversion 0 LOC_Os01g32044 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr1 16993808 17540899 0 0 Inversion 0 LOC_Os01g32044 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr1 37524972 C-G 0 0 Single Base Substitution 0 Homo FN4129-S Chr1 37524976 C-T 0 0 Single Base Substitution 0 Homo FN4129-S Chr10 8053077 Chr7 14407267 0 Translocation 0 LOC_Os07g25210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4129-S Chr10 8053077 Chr7 14407267 0 Translocation 0 LOC_Os10g15210 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr11 10218331 Chr2 2716298 0 Translocation 0 FN4129-S Chr11 10970263 10970267 0 0 Deletion 4 frameshift_variant HET LOC_Os11g19200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4129-S Chr11 11642319 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4129-S Chr11 15633001 15701000 0 0 Deletion 67999 LOC_Os11g27170 OsSCP58 - Putative Serine Carboxypeptidase homologue, expressed FN4129-S Chr11 15633001 15701000 0 0 Deletion 67999 LOC_Os11g27210 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr11 15633001 15701000 0 0 Deletion 67999 LOC_Os11g27220 hypothetical protein FN4129-S Chr11 15633001 15701000 0 0 Deletion 67999 LOC_Os11g27240 pentatricopeptide repeat domain containing protein, putative, expressed FN4129-S Chr11 15633001 15701000 0 0 Deletion 67999 LOC_Os11g27250 expressed protein FN4129-S Chr11 15633001 15701000 0 0 Deletion 67999 LOC_Os11g27264 OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed FN4129-S Chr11 15633001 15701000 0 0 Deletion 67999 LOC_Os11g27280 transposon protein, putative, CACTA, En/Spm sub-class FN4129-S Chr11 15633001 15701000 0 0 Deletion 67999 LOC_Os11g27290 transposon protein, putative, CACTA, En/Spm sub-class FN4129-S Chr11 18798651 18798651 0 0 Insertion 2 frameshift_variant HET LOC_Os11g31970 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4129-S Chr11 26111829 C-T 0 0 Single Base Substitution 0 HET FN4129-S Chr11 8772421 8772439 0 0 Deletion 18 HET FN4129-S Chr12 13953811 T-A 0 0 Single Base Substitution 0 HET FN4129-S Chr12 14276615 Chr3 6548021 0 Translocation 0 FN4129-S Chr12 14560306 G-A 0 0 Single Base Substitution 0 HET FN4129-S Chr12 18024049 A-G 0 0 Single Base Substitution 0 HET FN4129-S Chr12 19475755 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g32250 WRKY96, expressed FN4129-S Chr2 13195866 13195866 0 0 Insertion 1 HET FN4129-S Chr2 15753441 C-T 0 0 Single Base Substitution 0 HET FN4129-S Chr2 26107944 A-T 0 0 Single Base Substitution 0 HET FN4129-S Chr2 8888674 8888675 0 0 Deletion 1 HET FN4129-S Chr3 23123639 G-A 0 0 Single Base Substitution 0 Homo FN4129-S Chr3 26935383 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g47590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4129-S Chr3 5162870 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os03g10180 expressed protein FN4129-S Chr3 5162871 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g10180 expressed protein FN4129-S Chr4 25986492 Chr2 18076919 0 Translocation 0 LOC_Os02g30350 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr4 25986492 Chr2 18076919 0 Translocation 0 LOC_Os04g43870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4129-S Chr4 31426730 C-T 0 0 Single Base Substitution 0 Homo FN4129-S Chr4 3615340 Chr1 21959762 0 Translocation 0 LOC_Os01g39060 expressed protein FN4129-S Chr5 2526720 A-T 0 0 Single Base Substitution 0 HET FN4129-S Chr6 12669740 G-A 0 0 Single Base Substitution 0 HET FN4129-S Chr6 5197792 C-T 0 0 Single Base Substitution 0 Homo FN4129-S Chr6 6627875 G-A 0 0 Single Base Substitution 0 HET FN4129-S Chr6 7232502 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g13200 proton-dependent oligopeptide transport, putative, expressed FN4129-S Chr6 8908001 8927000 0 0 Deletion 18999 LOC_Os06g15720 retrotransposon protein, putative, unclassified FN4129-S Chr6 8908001 8927000 0 0 Deletion 18999 LOC_Os06g15730 expressed protein FN4129-S Chr6 8908001 8927000 0 0 Deletion 18999 LOC_Os06g15740 expressed protein FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15750 NB-ARC domain containing protein, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15760 eukaryotic aspartyl protease domain containing protein, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15779 aluminum-activated malate transporter, putative, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15800 expressed protein FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15810 integral membrane protein, putative, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15820 NHL repeat-containing protein, putative, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15830 expressed protein FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15840 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15860 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15870 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15880 retrotransposon protein, putative, unclassified FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15890 expressed protein FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15900 conserved hypothetical protein FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15910 potassium transporter, putative, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15920 transposon protein, putative, unclassified, expressed FN4129-S Chr6 8931001 9064000 0 0 Deletion 132999 LOC_Os06g15930 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr6 9081001 9111000 0 0 Deletion 29999 LOC_Os06g15980 ligA, putative, expressed FN4129-S Chr6 9081001 9111000 0 0 Deletion 29999 LOC_Os06g15990 aldehyde dehydrogenase, putative, expressed FN4129-S Chr6 9081001 9111000 0 0 Deletion 29999 LOC_Os06g15995 expressed protein FN4129-S Chr6 9081001 9111000 0 0 Deletion 29999 LOC_Os06g16000 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed FN4129-S Chr6 9081001 9111000 0 0 Deletion 29999 LOC_Os06g16010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16020 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16030 amidase family protein, putative, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16040 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16060 zinc finger, C3HC4 type domain containing protein, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16070 receptor-like protein kinase 2 precursor, putative, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16080 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16100 retrotransposon, putative, centromere-specific, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16110 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16120 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16130 transposon protein, putative, unclassified, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16140 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16150 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16160 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16170 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16180 retrotransposon protein, putative, unclassified FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16190 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16200 proteins of unknown function domain containing protein, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16210 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16220 transposon protein, putative, unclassified, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16230 transposon protein, putative, unclassified, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16240 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16250 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16260 OsSigP5 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16270 heat shock factor binding protein 2, putative, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16280 expressed protein FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16290 ribosomal protein L7Ae, putative, expressed FN4129-S Chr6 9113001 9293000 0 0 Deletion 179999 LOC_Os06g16300 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed FN4129-S Chr6 9303001 9347000 0 0 Deletion 43999 LOC_Os06g16320 retrotransposon protein, putative, unclassified, expressed FN4129-S Chr6 9303001 9347000 0 0 Deletion 43999 LOC_Os06g16330 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed FN4129-S Chr6 9303001 9347000 0 0 Deletion 43999 LOC_Os06g16340 expressed protein FN4129-S Chr6 9303001 9347000 0 0 Deletion 43999 LOC_Os06g16350 peroxidase precursor, putative, expressed FN4129-S Chr6 9303001 9347000 0 0 Deletion 43999 LOC_Os06g16360 expressed protein FN4129-S Chr6 9303001 9347000 0 0 Deletion 43999 LOC_Os06g16370 CCT/B-box zinc finger protein, putative, expressed FN4129-S Chr7 14805768 G-A 0 0 Single Base Substitution 0 HET FN4129-S Chr7 15935281 C-T 0 0 Single Base Substitution 0 Homo FN4129-S Chr7 17028577 Chr2 26723705 0 Translocation 0 FN4129-S Chr7 19449346 Chr1 12114911 0 Translocation 0 FN4129-S Chr7 21035 86668 0 0 Inversion 0 LOC_Os07g01030 glycosyl transferase, group 1 domain containing protein, expressed FN4129-S Chr7 21045 86678 0 0 Inversion 0 LOC_Os07g01030 glycosyl transferase, group 1 domain containing protein, expressed FN4129-S Chr7 5737207 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g10570 PROLM25 - Prolamin precursor, expressed FN4129-S Chr8 12324413 C-T 0 0 Single Base Substitution 0 Homo FN4129-S Chr8 16176177 C-T 0 0 Single Base Substitution 0 HET FN4129-S Chr8 6443611 6443611 0 0 Insertion 59 HET FN4129-S Chr9 14313214 14313215 0 0 Deletion 1 HET FN4129-S Chr9 21714456 G-A 0 0 Single Base Substitution 0 HET FN4129-S Chr9 3750995 A-C 0 0 Single Base Substitution 0 HET FN4129-S Chr9 490061 Chr2 12010920 0 Translocation 0 LOC_Os02g20380 expressed protein FN4129-S Chr9 490061 Chr2 12010920 0 Translocation 0 LOC_Os09g01680 DNA repair protein RAD51 homolog 4, putative, expressed FN4129-S Chr9 490064 Chr2 12010788 0 Translocation 0 LOC_Os02g20380 expressed protein FN4129-S Chr9 490064 Chr2 12010788 0 Translocation 0 LOC_Os09g01680 DNA repair protein RAD51 homolog 4, putative, expressed FN4129-S Chr9 7956969 T-G 0 0 Single Base Substitution 0 HET FN4129-S Chr9 9473497 T-A 0 0 Single Base Substitution 0 HET