FN4141-S Chr1 16763248 16763248 0 0 Insertion 3 disruptive_inframe_insertion HET LOC_Os01g29900 retrotransposon protein, putative, unclassified FN4141-S Chr1 21748376 21748381 0 0 Deletion 5 Homo FN4141-S Chr1 24450635 24450635 0 0 Insertion 2 HET FN4141-S Chr1 25452431 25452446 0 0 Deletion 15 HET FN4141-S Chr1 28891683 28891686 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os01g50330 strictosidine synthase 1 precursor, putative, expressed FN4141-S Chr1 35774528 35774529 0 0 Deletion 1 HET FN4141-S Chr1 41677799 41677802 0 0 Deletion 3 HET FN4141-S Chr1 9958174 9958175 0 0 Deletion 1 HET FN4141-S Chr10 12654956 A-G 0 0 Single Base Substitution 0 Homo FN4141-S Chr10 18188530 Chr9 1568692 0 Translocation 0 LOC_Os09g03260 retrotransposon protein, putative, unclassified, expressed FN4141-S Chr10 18188530 Chr9 1568692 0 Translocation 0 LOC_Os10g34078 retrotransposon protein, putative, unclassified FN4141-S Chr10 9964359 9964382 0 0 Deletion 23 HET FN4141-S Chr11 16732253 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g28910 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4141-S Chr11 22546108 Chr2 19802223 0 Translocation 0 FN4141-S Chr11 9825839 A-T 0 0 Single Base Substitution 0 HET FN4141-S Chr12 11468824 T-G 0 0 Single Base Substitution 0 Homo FN4141-S Chr12 13531304 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g23800 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4141-S Chr12 13531309 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g23800 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4141-S Chr12 22098483 G-T 0 0 Single Base Substitution 0 HET FN4141-S Chr12 3017790 3017790 0 0 Insertion 2 HET FN4141-S Chr2 12172578 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g20660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4141-S Chr2 2529916 T-C 0 0 Single Base Substitution 0 HET FN4141-S Chr2 26840803 T-G 0 0 Single Base Substitution 0 HET FN4141-S Chr2 35261865 35261865 0 0 Insertion 2 HET FN4141-S Chr2 5895184 G-A 0 0 Single Base Substitution 0 HET FN4141-S Chr2 7195801 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g13470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4141-S Chr3 15185001 15196000 0 0 Deletion 10999 LOC_Os03g26590 expressed protein FN4141-S Chr3 155847 901579 0 0 Inversion 0 LOC_Os03g01240 CCR4-Not complex component, Not1domain containing protein, expressed FN4141-S Chr3 155852 901587 0 0 Inversion 0 LOC_Os03g01240 CCR4-Not complex component, Not1domain containing protein, expressed FN4141-S Chr3 26369821 T-C 0 0 Single Base Substitution 0 Homo FN4141-S Chr3 30649952 C-T 0 0 Single Base Substitution 0 HET FN4141-S Chr3 935395 C-A 0 0 Single Base Substitution 0 HET FN4141-S Chr4 1331713 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g03180 disease resistance protein, putative, expressed FN4141-S Chr4 13865206 G-A 0 0 Single Base Substitution 0 HET FN4141-S Chr4 1835981 G-A 0 0 Single Base Substitution 0 HET FN4141-S Chr4 21574175 21574176 0 0 Deletion 1 HET FN4141-S Chr4 26353955 T-C 0 0 Single Base Substitution 0 Homo FN4141-S Chr4 2920828 A-G 0 0 Single Base Substitution 0 HET FN4141-S Chr4 3116779 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g06010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4141-S Chr4 678007 G-A 0 0 Single Base Substitution 0 HET FN4141-S Chr4 9658943 T-A 0 0 Single Base Substitution 0 HET FN4141-S Chr5 13749232 13749233 0 0 Deletion 1 HET FN4141-S Chr5 14844948 T-C 0 0 Single Base Substitution 0 Homo FN4141-S Chr5 5134528 5212044 0 0 Inversion 0 LOC_Os05g09180 transposon protein, putative, CACTA, En/Spm sub-class FN4141-S Chr5 5134528 5212044 0 0 Inversion 0 LOC_Os05g09330 transposon protein, putative, CACTA, En/Spm sub-class FN4141-S Chr6 1276190 1276190 0 0 Insertion 8 frameshift_variant HET LOC_Os06g03340 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4141-S Chr6 24085720 C-A 0 0 Single Base Substitution 0 Homo FN4141-S Chr6 24245629 24245630 0 0 Deletion 1 Homo FN4141-S Chr6 26303871 26303873 0 0 Deletion 2 Homo FN4141-S Chr6 5171564 A-G 0 0 Single Base Substitution 0 Homo FN4141-S Chr6 6968587 G-A 0 0 Single Base Substitution 0 Homo FN4141-S Chr6 8563189 G-A 0 0 Single Base Substitution 0 Homo FN4141-S Chr6 9794993 Chr4 17545681 0 Translocation 0 LOC_Os04g29530 retrotransposon protein, putative, unclassified, expressed FN4141-S Chr7 12166680 12166681 0 0 Deletion 1 HET FN4141-S Chr7 21415696 C-T 0 0 Single Base Substitution 0 HET FN4141-S Chr7 23525311 23525314 0 0 Deletion 3 Homo FN4141-S Chr7 248190 C-T 0 0 Single Base Substitution 0 HET FN4141-S Chr8 16270377 16270380 0 0 Deletion 3 Homo FN4141-S Chr8 19479840 Chr4 35498773 0 Translocation 0 FN4141-S Chr8 22301720 Chr6 13618918 0 Translocation 0 FN4141-S Chr8 23595946 23595956 0 0 Deletion 10 Homo FN4141-S Chr8 23667308 A-T 0 0 Single Base Substitution 0 Homo FN4141-S Chr8 7148501 7148502 0 0 Deletion 1 frameshift_variant HET LOC_Os08g12130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4141-S Chr9 11993640 11993641 0 0 Deletion 1 Homo FN4141-S Chr9 1629209 C-T 0 0 Single Base Substitution 0 HET