FN4149-S Chr1 1739254 1739257 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os01g04010 expressed protein FN4149-S Chr1 22562284 A-T 0 0 Single Base Substitution 0 HET FN4149-S Chr1 26657171 26657437 0 0 Inversion 0 LOC_Os01g46760 protein phosphatase 2C, putative, expressed FN4149-S Chr1 29824659 A-T 0 0 Single Base Substitution 0 HET FN4149-S Chr1 29862972 29862972 0 0 Insertion 1 HET FN4149-S Chr1 36879428 36879430 0 0 Deletion 2 HET FN4149-S Chr1 4522473 C-T 0 0 Single Base Substitution 0 HET FN4149-S Chr1 9318764 C-T 0 0 Single Base Substitution 0 Homo FN4149-S Chr10 10440577 C-A 0 0 Single Base Substitution 0 Homo FN4149-S Chr10 22262381 G-A 0 0 Single Base Substitution 0 HET FN4149-S Chr11 26016058 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g43110 transposon protein, putative, CACTA, En/Spm sub-class FN4149-S Chr11 3393254 C-A 0 0 Single Base Substitution 0 Homo FN4149-S Chr12 24011322 24011324 0 0 Deletion 2 HET FN4149-S Chr12 26428795 Chr5 15046387 0 Translocation 0 LOC_Os12g42550 methyl-CpG binding domain containing protein, putative, expressed FN4149-S Chr12 26428815 Chr5 15043834 0 Translocation 0 LOC_Os05g25840 ELMO/CED-12 family protein, putative, expressed FN4149-S Chr12 26428815 Chr5 15043834 0 Translocation 0 LOC_Os12g42550 methyl-CpG binding domain containing protein, putative, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05740 expressed protein FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05750 eukaryotic aspartyl protease domain containing protein, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05760 DnaK family protein, putative, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05770 expressed protein FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05780 transporter-related, putative, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05790 expressed protein FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05810 syntaxin-18, putative, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05820 expressed protein FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05830 transporter-related, putative, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05840 Cupin domain containing protein, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05860 Cupin domain containing protein, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05870 Cupin domain containing protein, expressed FN4149-S Chr12 2647001 2700000 0 0 Deletion 52999 LOC_Os12g05880 Cupin domain containing protein, expressed FN4149-S Chr2 27468099 27468101 0 0 Deletion 2 Homo FN4149-S Chr2 32574300 G-T 0 0 Single Base Substitution 0 Homo FN4149-S Chr2 6201777 G-A 0 0 Single Base Substitution 0 HET FN4149-S Chr3 4353049 A-G 0 0 Single Base Substitution 0 Homo FN4149-S Chr4 1053075 T-C 0 0 Single Base Substitution 0 Homo FN4149-S Chr4 15446326 G-A 0 0 Single Base Substitution 0 HET FN4149-S Chr4 22072944 G-A 0 0 Single Base Substitution 0 HET FN4149-S Chr4 22567215 22760546 0 0 Inversion 0 FN4149-S Chr4 22567219 22760556 0 0 Inversion 0 FN4149-S Chr4 27513595 C-A 0 0 Single Base Substitution 0 HET FN4149-S Chr4 28344638 A-G 0 0 Single Base Substitution 0 HET FN4149-S Chr4 4044750 4044761 0 0 Deletion 11 Homo FN4149-S Chr5 13963083 G-A 0 0 Single Base Substitution 0 HET FN4149-S Chr5 19244645 A-G 0 0 Single Base Substitution 0 HET FN4149-S Chr5 20368023 Chr3 16525221 0 Translocation 0 LOC_Os03g29100 retrotransposon protein, putative, unclassified, expressed FN4149-S Chr5 20368023 Chr3 16525221 0 Translocation 0 LOC_Os05g34370 retrotransposon protein, putative, unclassified, expressed FN4149-S Chr5 21807705 C-G 0 0 Single Base Substitution 0 Homo FN4149-S Chr5 25458455 G-A 0 0 Single Base Substitution 0 HET FN4149-S Chr5 7943411 A-T 0 0 Single Base Substitution 0 Homo FN4149-S Chr5 7943412 A-T 0 0 Single Base Substitution 0 Homo FN4149-S Chr5 7943413 C-T 0 0 Single Base Substitution 0 Homo FN4149-S Chr6 1110460 1110461 0 0 Deletion 1 frameshift_variant HET LOC_Os06g03020 expressed protein FN4149-S Chr6 23399511 Chr5 365671 0 Translocation 0 LOC_Os05g01610 FYVE zinc finger domain containing protein, expressed FN4149-S Chr6 2523938 C-T 0 0 Single Base Substitution 0 HET FN4149-S Chr7 15251549 A-T 0 0 Single Base Substitution 0 HET FN4149-S Chr7 15813403 G-A 0 0 Single Base Substitution 0 Homo FN4149-S Chr7 17505771 T-C 0 0 Single Base Substitution 0 Homo FN4149-S Chr7 18493664 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g31240 retrotransposon protein, putative, unclassified, expressed FN4149-S Chr7 28373065 28373070 0 0 Deletion 5 Homo FN4149-S Chr7 29408014 29408015 0 0 Deletion 1 Homo FN4149-S Chr7 3467548 3467557 0 0 Deletion 9 Homo FN4149-S Chr8 10365879 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g16920 expressed protein FN4149-S Chr8 10982232 10982239 0 0 Deletion 7 frameshift_variant Homo LOC_Os08g17890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4149-S Chr8 14319764 C-T 0 0 Single Base Substitution 0 Homo FN4149-S Chr8 15964764 15964771 0 0 Deletion 7 HET FN4149-S Chr8 17058226 17058226 0 0 Insertion 39 HET FN4149-S Chr8 4052128 G-A 0 0 Single Base Substitution 0 HET FN4149-S Chr9 10902320 G-A 0 0 Single Base Substitution 0 HET FN4149-S Chr9 13437460 G-C 0 0 Single Base Substitution 0 HET FN4149-S Chr9 17588732 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g28930 DNA binding protein, putative, expressed FN4149-S Chr9 21231526 21607352 0 0 Inversion 0 LOC_Os09g36810 beta-galactosidase precursor, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37495 auxin responsive protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37500 OsSAUR55 - Auxin-responsive SAUR gene family member, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37510 DUF292 domain containing protein, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37520 DUF630/DUF632 domains containing protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37530 hypothetical protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37540 uncharacterized protein PA4923, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37550 transposon protein, putative, CACTA, En/Spm sub-class FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37560 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37570 OsFBX340 - F-box domain containing protein, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37580 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37590 OsFBDUF47 - F-box and DUF domain containing protein, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37600 lysM domain-containing GPI-anchored protein precursor, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37610 MATE efflux protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37620 flavin-containing monooxygenase family protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37630 transposon protein, putative, unclassified, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37640 purine permease, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37650 flavin-containing monooxygenase family protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37660 retrotransposon protein, putative, unclassified, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37670 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37680 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37690 flavin-containing monooxygenase family protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37700 proteophosphoglycan ppg4, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37710 NIN, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37720 RNA recognition motif containing protein, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37730 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37740 ribosomal L18p/L5e family protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37750 hypothetical protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37760 bromodomain domain containing protein, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37770 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37780 serine/threonine-protein kinase receptor precursor, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37790 S-locus-specific glycoprotein S13 precursor, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37800 serine/threonine kinase, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37810 S-locus-specific glycoprotein precursor, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37820 transposon protein, putative, unclassified, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37830 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37834 serine/threonine-protein kinase receptor precursor, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37840 carbohydrate binding protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37850 retrotransposon protein, putative, unclassified, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37860 NOL1/NOP2/sun family protein, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37870 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37880 serine/threonine-protein kinase receptor precursor, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37890 serine/threonine-protein kinase receptor precursor, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37910 HMG1/2, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37920 helicase, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37930 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37940 expressed protein FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37949 serine/threonine-protein kinase SRPK1, putative, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37958 cupin domain containing protein, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37967 cupin domain containing protein, expressed FN4149-S Chr9 21606001 21898000 0 0 Deletion 291999 LOC_Os09g37976 cupin domain containing protein, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38080 retrotransposon protein, putative, unclassified, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38090 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38100 phosphate carrier protein, mitochondrial precursor, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38104 hypothetical protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38110 RING-H2 finger protein, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38120 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38130 auxin efflux carrier component, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38150 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38170 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38200 retrotransposon protein, putative, unclassified, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38210 auxin efflux carrier component, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38239 sulfotransferase domain containing protein, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38268 RNA polymerase IV largest subunit, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38300 OsFBK20 - F-box domain and kelch repeat containing protein, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38310 pentatricopeptide, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38320 phytoene synthase, chloroplast precursor, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38330 MORN repeat domain containing protein, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38340 ZOS9-17 - C2H2 zinc finger protein, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38350 AMP-binding domain containing protein, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38360 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38370 signal peptidase complex subunit 3, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38380 aspartic proteinase nepenthesin, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38390 octicosapeptide/Phox/Bem1p, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38400 prostatic spermine-binding protein precursor, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38410 sialin, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38420 cysteinyl-tRNA synthetase, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38429 hypothetical protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38440 ATXR, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38450 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38460 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38470 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38480 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38490 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38500 mitochondrial glycoprotein, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38510 purine permease, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38520 DOMON domain containing protein, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38530 transmembrane 9 superfamily member, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38540 plastocyanin-like domain containing protein, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38550 protein phosphatase 2C, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38560 OsRCI2-11 - Hydrophobic protein OSR8, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38570 transcription factor like protein, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38580 cyclic nucleotide-gated ion channel, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38590 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38600 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38610 ZOS9-18 - C2H2 zinc finger protein, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38620 NADPH reductase, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38630 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38640 IBR domain containing protein, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38650 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38660 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38670 thioredoxin, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38680 expressed protein FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38690 transporter family protein, putative, expressed FN4149-S Chr9 21941001 22248000 0 0 Deletion 306999 LOC_Os09g38700 STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed