FN4150-S Chr1 11464023 A-G 0 0 Single Base Substitution 0 Homo FN4150-S Chr1 17528375 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g32010 retrotransposon protein, putative, unclassified, expressed FN4150-S Chr1 34174715 C-T 0 0 Single Base Substitution 0 HET FN4150-S Chr10 12683687 12683698 0 0 Deletion 11 HET FN4150-S Chr10 1291001 1327000 0 0 Deletion 35999 LOC_Os10g03080 retrotransposon protein, putative, unclassified FN4150-S Chr10 1291001 1327000 0 0 Deletion 35999 LOC_Os10g03090 expressed protein FN4150-S Chr10 1291001 1327000 0 0 Deletion 35999 LOC_Os10g03100 Cf2/Cf5 disease resistance protein, putative, expressed FN4150-S Chr10 1291001 1327000 0 0 Deletion 35999 LOC_Os10g03110 retrotransposon protein, putative, unclassified, expressed FN4150-S Chr10 1291001 1327000 0 0 Deletion 35999 LOC_Os10g03120 retrotransposon protein, putative, unclassified, expressed FN4150-S Chr10 1291001 1327000 0 0 Deletion 35999 LOC_Os10g03130 retrotransposon protein, putative, unclassified, expressed FN4150-S Chr10 1291001 1327000 0 0 Deletion 35999 LOC_Os10g03140 retrotransposon protein, putative, unclassified, expressed FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03160 retrotransposon protein, putative, unclassified, expressed FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03180 retrotransposon, putative, centromere-specific, expressed FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03190 retrotransposon protein, putative, unclassified FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03200 retrotransposon protein, putative, unclassified FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03210 expressed protein FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03220 transposon protein, putative, unclassified, expressed FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03230 expressed protein FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03240 retrotransposon protein, putative, Ty3-gypsy subclass FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03260 expressed protein FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03270 hypothetical protein FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03280 expressed protein FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03290 CYP94D2, putative FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03300 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03310 retrotransposon protein, putative, Ty1-copia subclass FN4150-S Chr10 1337001 1406000 0 0 Deletion 68999 LOC_Os10g03320 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03350 retrotransposon protein, putative, Ty1-copia subclass FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03360 transferase family protein, putative, expressed FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03370 retrotransposon, putative, centromere-specific, expressed FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03380 hypothetical protein FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03390 transferase family protein, putative, expressed FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03400 phosphatidylinositol transfer, putative, expressed FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03410 hypothetical protein FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03420 receptor-like protein kinase 2 precursor, putative, expressed FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03430 expressed protein FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03440 avr9/Cf-9 rapidly elicited protein 74, putative, expressed FN4150-S Chr10 1417001 1482000 0 0 Deletion 64999 LOC_Os10g03450 expressed protein FN4150-S Chr10 1492001 1531000 0 0 Deletion 38999 LOC_Os10g03470 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4150-S Chr10 1492001 1531000 0 0 Deletion 38999 LOC_Os10g03480 cyclin-dependent kinase G-1, putative, expressed FN4150-S Chr10 1492001 1531000 0 0 Deletion 38999 LOC_Os10g03490 expressed protein FN4150-S Chr10 1492001 1531000 0 0 Deletion 38999 LOC_Os10g03500 expressed protein FN4150-S Chr10 1492001 1531000 0 0 Deletion 38999 LOC_Os10g03510 hypothetical protein FN4150-S Chr10 1492001 1531000 0 0 Deletion 38999 LOC_Os10g03520 expressed protein FN4150-S Chr10 1492001 1531000 0 0 Deletion 38999 LOC_Os10g03530 CAF1 family ribonuclease containing protein, putative, expressed FN4150-S Chr10 1492001 1531000 0 0 Deletion 38999 LOC_Os10g03540 ribosomal protein L7Ae, putative, expressed FN4150-S Chr10 15082773 G-A 0 0 Single Base Substitution 0 HET FN4150-S Chr10 1553919 A-T 0 0 Single Base Substitution 0 HET FN4150-S Chr10 1889773 1889778 0 0 Deletion 5 HET FN4150-S Chr10 74285 74287 0 0 Deletion 2 HET FN4150-S Chr11 10387219 C-G 0 0 Single Base Substitution 0 HET FN4150-S Chr11 12779148 A-T 0 0 Single Base Substitution 0 HET FN4150-S Chr11 13385860 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g23230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4150-S Chr11 13429686 A-G 0 0 Single Base Substitution 0 HET FN4150-S Chr11 19420512 T-A 0 0 Single Base Substitution 0 Homo FN4150-S Chr11 22270287 G-T 0 0 Single Base Substitution 0 Homo FN4150-S Chr11 25114333 25114333 0 0 Insertion 1 HET FN4150-S Chr12 10217933 10217944 0 0 Deletion 11 Homo FN4150-S Chr12 1359054 C-T 0 0 Single Base Substitution 0 HET FN4150-S Chr12 1943743 1943748 0 0 Deletion 5 HET FN4150-S Chr12 2007659 2007665 0 0 Deletion 6 HET FN4150-S Chr12 2127073 G-A 0 0 Single Base Substitution 0 HET FN4150-S Chr12 23059861 G-A 0 0 Single Base Substitution 0 HET FN4150-S Chr12 24600521 T-G 0 0 Single Base Substitution 0 Homo FN4150-S Chr12 4416780 A-T 0 0 Single Base Substitution 0 HET FN4150-S Chr2 11365581 11365598 0 0 Deletion 17 HET FN4150-S Chr2 1250398 C-T 0 0 Single Base Substitution 0 Homo FN4150-S Chr2 15450838 T-C 0 0 Single Base Substitution 0 Homo FN4150-S Chr2 15741258 C-T 0 0 Single Base Substitution 0 HET FN4150-S Chr2 20667894 A-G 0 0 Single Base Substitution 0 Homo FN4150-S Chr2 5653841 6109879 0 0 Inversion 0 FN4150-S Chr2 6109883 6418838 0 0 Inversion 0 LOC_Os02g12330 expressed protein FN4150-S Chr2 7411372 7411372 0 0 Insertion 226 HET FN4150-S Chr3 10515264 T-A 0 0 Single Base Substitution 0 HET FN4150-S Chr3 1210088 G-A 0 0 Single Base Substitution 0 HET FN4150-S Chr3 17944944 C-T 0 0 Single Base Substitution 0 HET FN4150-S Chr3 1942675 1942692 0 0 Deletion 17 HET FN4150-S Chr3 29580045 29580046 0 0 Deletion 1 Homo FN4150-S Chr3 31599741 G-A 0 0 Single Base Substitution 0 Homo FN4150-S Chr3 765266 T-G 0 0 Single Base Substitution 0 HET FN4150-S Chr3 9204209 9204225 0 0 Deletion 16 frameshift_variant Homo LOC_Os03g16670 haloacid dehalogenase-like hydrolase family protein, putative, expressed FN4150-S Chr4 10682065 10682066 0 0 Deletion 1 HET FN4150-S Chr4 14162214 14162219 0 0 Deletion 5 HET FN4150-S Chr4 14684206 15117381 0 0 Inversion 0 FN4150-S Chr4 17456114 17456118 0 0 Deletion 4 HET FN4150-S Chr4 34453136 34453142 0 0 Deletion 6 Homo FN4150-S Chr4 3906948 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g07340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4150-S Chr5 12413389 G-A 0 0 Single Base Substitution 0 HET FN4150-S Chr5 17990575 C-A 0 0 Single Base Substitution 0 HET FN4150-S Chr5 1933447 1933448 0 0 Deletion 1 frameshift_variant HET LOC_Os05g04240 GDSL-like lipase/acylhydrolase, putative, expressed FN4150-S Chr5 20090488 20090488 0 0 Insertion 2 HET FN4150-S Chr6 11566260 C-A 0 0 Single Base Substitution 0 HET FN4150-S Chr6 11566262 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g20160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4150-S Chr6 11887287 C-G 0 0 Single Base Substitution 0 HET FN4150-S Chr6 16065622 A-T 0 0 Single Base Substitution 0 HET FN4150-S Chr6 20317602 20317605 0 0 Deletion 3 HET FN4150-S Chr7 10213030 C-T 0 0 Single Base Substitution 0 HET FN4150-S Chr7 11884262 C-A 0 0 Single Base Substitution 0 HET FN4150-S Chr7 12609031 G-C 0 0 Single Base Substitution 0 HET FN4150-S Chr7 14419542 G-T 0 0 Single Base Substitution 0 HET FN4150-S Chr7 2223770 2223771 0 0 Deletion 1 Homo FN4150-S Chr7 28766107 28766108 0 0 Deletion 1 frameshift_variant Homo LOC_Os07g48160 alpha-galactosidase precursor, putative, expressed FN4150-S Chr7 4550551 T-C 0 0 Single Base Substitution 0 Homo FN4150-S Chr7 8046310 C-T 0 0 Single Base Substitution 0 HET FN4150-S Chr7 8046312 G-T 0 0 Single Base Substitution 0 HET FN4150-S Chr7 8617841 C-T 0 0 Single Base Substitution 0 HET FN4150-S Chr8 10359560 G-A 0 0 Single Base Substitution 0 HET FN4150-S Chr8 16087130 16087131 0 0 Deletion 1 HET FN4150-S Chr8 19440091 G-A 0 0 Single Base Substitution 0 HET FN4150-S Chr8 2218416 G-T 0 0 Single Base Substitution 0 HET FN4150-S Chr8 24860001 24870000 0 0 Deletion 9999 LOC_Os08g39340 expressed protein FN4150-S Chr8 24860001 24870000 0 0 Deletion 9999 LOC_Os08g39350 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN4150-S Chr8 24869848 Chr3 14211117 0 Translocation 0 LOC_Os08g39350 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN4150-S Chr8 24870165 Chr3 14211126 0 Translocation 0 LOC_Os08g39350 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN4150-S Chr8 24926835 Chr2 32190001 0 Translocation 0 LOC_Os02g52620 expressed protein FN4150-S Chr8 24927128 Chr2 9936528 0 Translocation 0 LOC_Os02g17320 uridine/cytidine kinase-like 1, putative, expressed FN4150-S Chr8 26597028 G-A 0 0 Single Base Substitution 0 HET FN4150-S Chr9 1176699 G-C 0 0 Single Base Substitution 0 HET FN4150-S Chr9 17311931 T-C 0 0 Single Base Substitution 0 Homo FN4150-S Chr9 2992485 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g06360 retrotransposon, putative, centromere-specific FN4150-S Chr9 5490047 A-T 0 0 Single Base Substitution 0 Homo FN4150-S Chr9 5490495 A-T 0 0 Single Base Substitution 0 Homo FN4150-S Chr9 6215673 6481937 0 0 Inversion 0 LOC_Os09g11610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4150-S Chr9 6215683 6481943 0 0 Inversion 0 LOC_Os09g11610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed