FN4184-S Chr1 12402431 13043250 0 0 Inversion 0 FN4184-S Chr1 12402736 13056221 0 0 Inversion 0 FN4184-S Chr1 25990717 25990718 0 0 Deletion 1 HET FN4184-S Chr1 42539333 42539342 0 0 Deletion 9 HET FN4184-S Chr1 6678203 T-C 0 0 Single Base Substitution 0 HET FN4184-S Chr10 4955723 A-G 0 0 Single Base Substitution 0 Homo FN4184-S Chr10 9009080 C-T 0 0 Single Base Substitution 0 Homo FN4184-S Chr11 1195001 Chr3 34057191 0 Translocation 0 LOC_Os03g59810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4184-S Chr11 14107685 G-A 0 0 Single Base Substitution 0 HET FN4184-S Chr11 26002459 Chr6 20608561 0 Translocation 0 FN4184-S Chr11 26066165 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g43210 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4184-S Chr12 12360854 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g21950 expressed protein FN4184-S Chr12 12421310 12421319 0 0 Deletion 9 Homo FN4184-S Chr12 13800085 T-C 0 0 Single Base Substitution 0 Homo FN4184-S Chr12 14970991 G-A 0 0 Single Base Substitution 0 Homo FN4184-S Chr12 17319744 C-T 0 0 Single Base Substitution 0 HET FN4184-S Chr12 18804958 G-A 0 0 Single Base Substitution 0 Homo FN4184-S Chr12 22383789 C-T 0 0 Single Base Substitution 0 HET FN4184-S Chr12 23129762 A-G 0 0 Single Base Substitution 0 Homo FN4184-S Chr12 8255681 8255682 0 0 Deletion 1 frameshift_variant Homo LOC_Os12g14470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4184-S Chr2 2871903 2903241 0 0 Inversion 0 LOC_Os02g05820 protein kinase domain containing protein, expressed FN4184-S Chr2 2871903 2903241 0 0 Inversion 0 LOC_Os02g05870 expressed protein FN4184-S Chr2 2871916 2903246 0 0 Inversion 0 LOC_Os02g05820 protein kinase domain containing protein, expressed FN4184-S Chr2 2871916 2903246 0 0 Inversion 0 LOC_Os02g05870 expressed protein FN4184-S Chr2 31561147 A-G 0 0 Single Base Substitution 0 HET FN4184-S Chr2 6453910 G-C 0 0 Single Base Substitution 0 Homo FN4184-S Chr3 13460189 13548308 0 0 Inversion 0 FN4184-S Chr3 15714837 T-C 0 0 Single Base Substitution 0 Homo FN4184-S Chr3 17283786 G-A 0 0 Single Base Substitution 0 Homo FN4184-S Chr3 19861733 19861940 0 0 Inversion 0 FN4184-S Chr3 31995028 T-A 0 0 Single Base Substitution 0 HET FN4184-S Chr3 3759408 C-T 0 0 Single Base Substitution 0 HET FN4184-S Chr3 8616071 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g15620 retrotransposon protein, putative, unclassified, expressed FN4184-S Chr3 9335023 9335024 0 0 Deletion 1 HET FN4184-S Chr4 15969188 C-T 0 0 Single Base Substitution 0 HET FN4184-S Chr4 17209001 17227000 0 0 Deletion 17999 LOC_Os04g29050 expressed protein FN4184-S Chr4 17209001 17227000 0 0 Deletion 17999 LOC_Os04g29060 hypothetical protein FN4184-S Chr4 17229001 17284000 0 0 Deletion 54999 LOC_Os04g29080 hypothetical protein FN4184-S Chr4 17229001 17284000 0 0 Deletion 54999 LOC_Os04g29090 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed FN4184-S Chr4 17229001 17284000 0 0 Deletion 54999 LOC_Os04g29100 hypothetical protein FN4184-S Chr4 17229001 17284000 0 0 Deletion 54999 LOC_Os04g29110 hypothetical protein FN4184-S Chr4 17229001 17284000 0 0 Deletion 54999 LOC_Os04g29120 retrotransposon protein, putative, unclassified, expressed FN4184-S Chr4 17229001 17284000 0 0 Deletion 54999 LOC_Os04g29130 retrotransposon protein, putative, unclassified FN4184-S Chr4 17229001 17284000 0 0 Deletion 54999 LOC_Os04g29140 retrotransposon protein, putative, unclassified FN4184-S Chr4 18915344 18915344 0 0 Insertion 2 Homo FN4184-S Chr4 19566945 G-A 0 0 Single Base Substitution 0 Homo FN4184-S Chr4 27387294 A-G 0 0 Single Base Substitution 0 Homo FN4184-S Chr4 27917335 27917340 0 0 Deletion 5 Homo FN4184-S Chr4 29864197 G-A 0 0 Single Base Substitution 0 Homo FN4184-S Chr4 31229861 31229861 0 0 Insertion 2 HET FN4184-S Chr4 33911351 33911351 0 0 Insertion 1 HET FN4184-S Chr4 34499168 C-T 0 0 Single Base Substitution 0 Homo FN4184-S Chr5 10778342 T-A 0 0 Single Base Substitution 0 HET FN4184-S Chr5 14294706 G-A 0 0 Single Base Substitution 0 HET FN4184-S Chr5 2925805 G-A 0 0 Single Base Substitution 0 HET FN4184-S Chr5 29907288 T-C 0 0 Single Base Substitution 0 HET FN4184-S Chr6 13698853 Chr1 2504344 0 Translocation 0 FN4184-S Chr6 30712942 30712943 0 0 Deletion 1 HET FN4184-S Chr6 3561983 T-C 0 0 Single Base Substitution 0 HET FN4184-S Chr6 4635702 4969200 0 0 Inversion 0 LOC_Os06g09750 retrotransposon protein, putative, unclassified, expressed FN4184-S Chr6 4969185 5041186 0 0 Inversion 0 LOC_Os06g09750 retrotransposon protein, putative, unclassified, expressed FN4184-S Chr6 4969185 5041186 0 0 Inversion 0 LOC_Os06g09890 smr domain containing protein, expressed FN4184-S Chr6 6822789 Chr4 27350911 0 Translocation 0 FN4184-S Chr7 18341831 18341833 0 0 Deletion 2 frameshift_variant Homo LOC_Os07g30980 uvrD/REP helicase family protein, putative, expressed FN4184-S Chr7 1994091 2894305 0 0 Inversion 0 LOC_Os07g04520 protein kinase, putative, expressed FN4184-S Chr7 1994096 2894312 0 0 Inversion 0 LOC_Os07g04520 protein kinase, putative, expressed FN4184-S Chr7 22042877 22042884 0 0 Deletion 7 Homo FN4184-S Chr7 26103831 A-G 0 0 Single Base Substitution 0 HET FN4184-S Chr7 2892580 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g05960 expressed protein FN4184-S Chr7 2892581 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g05960 expressed protein FN4184-S Chr7 330418 330431 0 0 Deletion 13 HET FN4184-S Chr8 10070851 Chr5 5212167 0 Translocation 0 LOC_Os05g09330 transposon protein, putative, CACTA, En/Spm sub-class FN4184-S Chr8 1156011 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g02750 expressed protein FN4184-S Chr8 17488855 17488866 0 0 Deletion 11 HET FN4184-S Chr8 22388823 Chr2 16788107 0 Translocation 0 LOC_Os02g28400 retrotransposon protein, putative, unclassified, expressed FN4184-S Chr8 22388823 Chr2 16788107 0 Translocation 0 LOC_Os08g35520 retrotransposon protein, putative, unclassified, expressed FN4184-S Chr8 23822642 G-A 0 0 Single Base Substitution 0 HET FN4184-S Chr8 23822658 G-A 0 0 Single Base Substitution 0 HET FN4184-S Chr8 25519249 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g40310 transposon protein, putative, unclassified, expressed FN4184-S Chr8 3767118 Chr1 12402433 0 Translocation 0 FN4184-S Chr8 3767141 Chr1 12402725 0 Translocation 0 FN4184-S Chr8 8561243 Chr1 14847320 0 Translocation 0 LOC_Os08g14290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4184-S Chr9 10309860 Chr4 1632054 0 Translocation 0 FN4184-S Chr9 15230685 C-T 0 0 Single Base Substitution 0 HET FN4184-S Chr9 19300280 C-T 0 0 Single Base Substitution 0 HET FN4184-S Chr9 22398199 T-C 0 0 Single Base Substitution 0 HET FN4184-S Chr9 6443111 C-A 0 0 Single Base Substitution 0 HET FN4184-S Chr9 7837398 Chr4 18954423 0 Translocation 0