FN4260-S Chr1 13115215 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr1 14287249 T-C 0 0 Single Base Substitution 0 HET FN4260-S Chr1 24185770 G-A 0 0 Single Base Substitution 0 Homo FN4260-S Chr1 25995747 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g45760 YUC4, putative, expressed FN4260-S Chr1 27634173 G-T 0 0 Single Base Substitution 0 HET FN4260-S Chr1 2918021 2918029 0 0 Deletion 8 Homo FN4260-S Chr1 31321024 31321024 0 0 Insertion 1 frameshift_variant HET LOC_Os01g54440 expressed protein FN4260-S Chr1 36981758 36981759 0 0 Deletion 1 frameshift_variant HET LOC_Os01g63750 glycine-rich protein, putative, expressed FN4260-S Chr1 43165792 G-A 0 0 Single Base Substitution 0 Homo FN4260-S Chr1 7749878 7749890 0 0 Deletion 12 disruptive_inframe_deletion HET LOC_Os01g13820 retrotransposon protein, putative, unclassified, expressed FN4260-S Chr10 11334327 G-A 0 0 Single Base Substitution 0 Homo FN4260-S Chr10 12561896 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24470 retrotransposon, putative, centromere-specific, expressed FN4260-S Chr10 17757627 G-A 0 0 Single Base Substitution 0 HET FN4260-S Chr10 5091446 5091446 0 0 Insertion 1 frameshift_variant HET LOC_Os10g09440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4260-S Chr11 13650101 13650106 0 0 Deletion 5 HET FN4260-S Chr11 14028166 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g24570 PPR repeat domain containing protein, putative, expressed FN4260-S Chr11 15009098 A-G 0 0 Single Base Substitution 0 HET FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19810 retrotransposon protein, putative, unclassified, expressed FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19820 retrotransposon protein, putative, unclassified FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19830 retrotransposon protein, putative, unclassified FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19840 retrotransposon protein, putative, unclassified FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19850 retrotransposon protein, putative, unclassified FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19860 expressed protein FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19880 expressed protein FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19890 retrotransposon protein, putative, LINE subclass, expressed FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19910 expressed protein FN4260-S Chr12 11550001 11611000 0 0 Deletion 60999 LOC_Os12g19920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4260-S Chr12 11615598 Chr8 14455075 0 Translocation 0 LOC_Os08g23880 No apical meristem protein, putative, expressed FN4260-S Chr12 11615598 Chr8 14455075 0 Translocation 0 LOC_Os12g19930 retrotransposon protein, putative, Ty3-gypsy subclass FN4260-S Chr12 11616085 Chr8 14455064 0 Translocation 0 LOC_Os08g23880 No apical meristem protein, putative, expressed FN4260-S Chr12 11616085 Chr8 14455064 0 Translocation 0 LOC_Os12g19930 retrotransposon protein, putative, Ty3-gypsy subclass FN4260-S Chr12 13338271 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr12 14741163 A-G 0 0 Single Base Substitution 0 HET FN4260-S Chr12 15059890 G-A 0 0 Single Base Substitution 0 HET FN4260-S Chr12 15059891 C-A 0 0 Single Base Substitution 0 HET FN4260-S Chr12 3140886 G-T 0 0 Single Base Substitution 0 HET FN4260-S Chr12 331331 G-A 0 0 Single Base Substitution 0 HET FN4260-S Chr12 7839997 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr12 9802829 Chr6 7521453 0 Translocation 0 FN4260-S Chr2 11838718 11838719 0 0 Deletion 1 frameshift_variant HET LOC_Os02g20100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4260-S Chr2 21750086 C-A 0 0 Single Base Substitution 0 HET FN4260-S Chr2 23554885 A-C 0 0 Single Base Substitution 0 HET FN4260-S Chr2 2935455 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g05910 phytosulfokine receptor precursor, putative, expressed FN4260-S Chr2 29608768 29608965 0 0 Inversion 0 LOC_Os02g48360 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed FN4260-S Chr2 29748054 29748061 0 0 Deletion 7 HET FN4260-S Chr2 30503967 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr2 34765617 A-G 0 0 Single Base Substitution 0 HET FN4260-S Chr2 4221354 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g08030 aldose 1-epimerase, putative, expressed FN4260-S Chr2 6797031 6797031 0 0 Insertion 22 HET FN4260-S Chr3 15896144 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g27730 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4260-S Chr3 19263201 G-A 0 0 Single Base Substitution 0 HET FN4260-S Chr3 24822020 C-A 0 0 Single Base Substitution 0 HET FN4260-S Chr3 2589564 2589573 0 0 Deletion 9 Homo FN4260-S Chr3 36210464 36210473 0 0 Deletion 9 disruptive_inframe_deletion HET LOC_Os03g64080 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4260-S Chr4 10004121 10004122 0 0 Deletion 1 HET FN4260-S Chr4 12037324 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr4 12830110 C-A 0 0 Single Base Substitution 0 HET FN4260-S Chr4 1727869 T-C 0 0 Single Base Substitution 0 HET FN4260-S Chr4 30332812 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr4 30473033 30473045 0 0 Deletion 12 HET FN4260-S Chr4 31334821 A-T 0 0 Single Base Substitution 0 HET FN4260-S Chr4 3545381 T-G 0 0 Single Base Substitution 0 Homo FN4260-S Chr4 6861955 G-A 0 0 Single Base Substitution 0 HET FN4260-S Chr4 7109247 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr4 7350903 7350906 0 0 Deletion 3 HET FN4260-S Chr4 8028304 G-A 0 0 Single Base Substitution 0 Homo FN4260-S Chr4 8356901 8356902 0 0 Deletion 1 frameshift_variant Homo LOC_Os04g14860 retrotransposon protein, putative, unclassified, expressed FN4260-S Chr4 9716908 T-C 0 0 Single Base Substitution 0 HET FN4260-S Chr5 1104597 A-T 0 0 Single Base Substitution 0 HET FN4260-S Chr5 28489190 A-T 0 0 Single Base Substitution 0 HET FN4260-S Chr5 4619001 4656000 0 0 Deletion 36999 LOC_Os05g08460 OsFBX164 - F-box domain containing protein, expressed FN4260-S Chr5 4619001 4656000 0 0 Deletion 36999 LOC_Os05g08470 expressed protein FN4260-S Chr5 4619001 4656000 0 0 Deletion 36999 LOC_Os05g08480 cytokinin-O-glucosyltransferase 1, putative, expressed FN4260-S Chr5 4619001 4656000 0 0 Deletion 36999 LOC_Os05g08490 cytokinin-O-glucosyltransferase 1, putative, expressed FN4260-S Chr5 4619001 4656000 0 0 Deletion 36999 LOC_Os05g08500 transposon protein, putative, unclassified, expressed FN4260-S Chr5 4619001 4656000 0 0 Deletion 36999 LOC_Os05g08510 glucosyltransferase, putative FN4260-S Chr5 4619001 4656000 0 0 Deletion 36999 LOC_Os05g08530 phototropic-responsive NPH3 family protein, putative, expressed FN4260-S Chr5 5271904 A-T 0 0 Single Base Substitution 0 HET FN4260-S Chr5 6445651 C-A 0 0 Single Base Substitution 0 HET FN4260-S Chr6 104491 G-T 0 0 Single Base Substitution 0 HET FN4260-S Chr6 10791241 C-A 0 0 Single Base Substitution 0 HET FN4260-S Chr6 11102671 11102683 0 0 Deletion 12 Homo FN4260-S Chr7 13864187 13864197 0 0 Deletion 10 HET FN4260-S Chr7 16203887 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g27760 expressed protein FN4260-S Chr7 17033039 A-G 0 0 Single Base Substitution 0 HET FN4260-S Chr7 18696825 G-C 0 0 Single Base Substitution 0 HET FN4260-S Chr7 22097591 C-A 0 0 Single Base Substitution 0 HET FN4260-S Chr7 28114885 C-A 0 0 Single Base Substitution 0 Homo FN4260-S Chr8 16437471 G-A 0 0 Single Base Substitution 0 HET FN4260-S Chr8 19231108 A-G 0 0 Single Base Substitution 0 HET FN4260-S Chr8 461247 G-A 0 0 Single Base Substitution 0 HET FN4260-S Chr8 5218764 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr8 5479074 T-A 0 0 Single Base Substitution 0 HET FN4260-S Chr8 7587653 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr8 8554159 8554160 0 0 Deletion 1 HET FN4260-S Chr9 11231189 T-A 0 0 Single Base Substitution 0 HET FN4260-S Chr9 2421493 C-T 0 0 Single Base Substitution 0 HET FN4260-S Chr9 7133786 C-T 0 0 Single Base Substitution 0 HET