FN427-S Chr1 10640708 10640710 0 0 Deletion 2 FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19460 retrotransposon protein, putative, unclassified, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19470 nodal modulator 1 precursor, putative, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19480 kelch motif family protein, putative, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19490 pentatricopeptide, putative, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19500 expressed protein FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19529 pentatricopeptide, putative, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19548 pentatricopeptide, putative, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19570 hypothetical protein FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19580 expressed protein FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19600 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19610 plant protein of unknown function domain containing protein, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19620 retrotransposon protein, putative, unclassified, expressed FN427-S Chr1 11009001 11133000 0 0 Deletion 124000 LOC_Os01g19630 expressed protein FN427-S Chr1 11847481 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr1 23437239 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr1 23693797 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr1 33765792 33770302 0 0 Deletion 4510 LOC_Os01g58420 AP2 domain containing protein, expressed FN427-S Chr1 33765792 33770302 0 0 Deletion 4510 LOC_Os01g58430 expressed protein FN427-S Chr1 34036917 34043963 0 0 Deletion 7046 LOC_Os01g58910 auxin-induced protein 5NG4, putative, expressed FN427-S Chr1 34237930 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN427-S Chr1 3644000 3644007 0 0 Deletion 7 FN427-S Chr1 41000976 41000977 0 0 Deletion 1 FN427-S Chr1 5001711 5033544 0 0 Deletion 31833 LOC_Os01g09700 aminotransferase, classes I and II, domain containing protein, expressed FN427-S Chr1 5001711 5033544 0 0 Deletion 31833 LOC_Os01g09710 expressed protein FN427-S Chr1 5001711 5033544 0 0 Deletion 31833 LOC_Os01g09720 dof zinc finger domain containing protein, putative, expressed FN427-S Chr1 5001711 5033544 0 0 Deletion 31833 LOC_Os01g09730 expressed protein FN427-S Chr1 5001711 5033544 0 0 Deletion 31833 LOC_Os01g09740 F-box/LRR-repeat protein, putative, expressed FN427-S Chr1 5001711 5033544 0 0 Deletion 31833 LOC_Os01g09750 RNA methyltransferase protein, putative, expressed FN427-S Chr1 5001711 5033544 0 0 Deletion 31833 LOC_Os01g09760 DIRP family protein, putative, expressed FN427-S Chr10 2723309 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr10 5197354 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr11 10627520 10627527 0 0 Deletion 7 FN427-S Chr11 19039861 19039861 0 0 Insertion 2 FN427-S Chr11 28162516 Chr5 14142176 0 Translocation 0 LOC_Os11g46880 protein kinase domain containing protein, expressed FN427-S Chr11 9917967 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr12 13679842 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN427-S Chr12 16386232 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr12 19270001 19330000 0 0 Deletion 60000 LOC_Os12g31980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN427-S Chr12 19270001 19330000 0 0 Deletion 60000 LOC_Os12g31990 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN427-S Chr12 19270001 19330000 0 0 Deletion 60000 LOC_Os12g32000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN427-S Chr12 19270001 19330000 0 0 Deletion 60000 LOC_Os12g32010 expressed protein FN427-S Chr12 19270001 19330000 0 0 Deletion 60000 LOC_Os12g32020 expressed protein FN427-S Chr12 19270001 19330000 0 0 Deletion 60000 LOC_Os12g32030 expressed protein FN427-S Chr12 22729736 Chr1 24726875 0 Translocation 0 FN427-S Chr2 13431056 13431057 0 0 Deletion 1 LOC_Os02g22500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN427-S Chr2 25101204 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os02g41750 transposon protein, putative, unclassified FN427-S Chr2 25101205 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN427-S Chr2 4898962 4898972 0 0 Deletion 10 FN427-S Chr2 6609463 6609469 0 0 Deletion 6 LOC_Os02g12660 protein kinase domain containing protein, putative, expressed FN427-S Chr3 13247409 13247460 0 0 Deletion 51 LOC_Os03g22900 SNF2 family N-terminal domain containing protein, expressed FN427-S Chr3 19453900 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr3 23132909 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr3 27139989 27139991 0 0 Deletion 2 LOC_Os03g47804 expressed protein FN427-S Chr3 31100647 31100647 0 0 Insertion 2 FN427-S Chr3 32761226 32761227 0 0 Deletion 1 FN427-S Chr4 13582699 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN427-S Chr4 14232629 14232650 0 0 Deletion 21 FN427-S Chr4 19507783 19507788 0 0 Deletion 5 FN427-S Chr4 22579487 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr4 25161183 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr4 25994560 27166913 0 0 Inversion 1172353 FN427-S Chr4 28297502 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN427-S Chr4 29736741 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN427-S Chr4 32815961 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr5 18882989 C-G 0 0 Single Base Substitution 0 INTRON HET FN427-S Chr5 21128111 A-C 0 0 Single Base Substitution 0 INTRON HET FN427-S Chr5 21170463 21170491 0 0 Deletion 28 FN427-S Chr5 21184248 21184256 0 0 Deletion 8 FN427-S Chr5 27057981 T-A 0 0 Single Base Substitution 0 INTRON HET FN427-S Chr5 27057982 A-T 0 0 Single Base Substitution 0 INTRON HET FN427-S Chr5 5747031 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN427-S Chr5 6162575 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN427-S Chr6 12370988 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr6 12399322 12399334 0 0 Deletion 12 FN427-S Chr6 29011108 29011109 0 0 Deletion 1 LOC_Os06g47980 expressed protein FN427-S Chr6 29011424 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN427-S Chr6 30446425 30446426 0 0 Deletion 1 FN427-S Chr7 25332014 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr7 3223558 3223558 0 0 Insertion 4 FN427-S Chr7 4828646 4828652 0 0 Deletion 6 FN427-S Chr7 6771097 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr7 7949118 7949119 0 0 Deletion 1 FN427-S Chr8 14216800 14216805 0 0 Deletion 5 LOC_Os08g23480 retrotransposon protein, putative, Ty1-copia subclass, expressed FN427-S Chr8 157044 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr8 18750789 18750802 0 0 Deletion 13 FN427-S Chr8 19123887 19123888 0 0 Deletion 1 FN427-S Chr8 21029939 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr8 5207026 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN427-S Chr8 9753767 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g16000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN427-S Chr9 18340133 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN427-S Chr9 1939001 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g03820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN427-S Chr9 299156 299162 0 0 Deletion 6 FN427-S Chr9 3199807 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN427-S Chr9 6127691 G-T 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os09g11030 retrotransposon protein, putative, unclassified, expressed FN427-S Chr9 6127692 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g11030 retrotransposon protein, putative, unclassified, expressed FN427-S Chr9 9300615 9300633 0 0 Deletion 18