FN4271-S Chr1 10186488 10186490 0 0 Deletion 2 HET FN4271-S Chr1 18989041 T-C 0 0 Single Base Substitution 0 Homo FN4271-S Chr1 20434959 20434961 0 0 Deletion 2 Homo FN4271-S Chr1 20851594 C-A 0 0 Single Base Substitution 0 HET FN4271-S Chr1 21402001 21489000 0 0 Deletion 86999 LOC_Os01g38229 peptidyl-prolyl isomerase, putative, expressed FN4271-S Chr1 21402001 21489000 0 0 Deletion 86999 LOC_Os01g38244 expressed protein FN4271-S Chr1 21402001 21489000 0 0 Deletion 86999 LOC_Os01g38260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4271-S Chr1 21402001 21489000 0 0 Deletion 86999 LOC_Os01g38270 retrotransposon protein, putative, Ty3-gypsy subclass FN4271-S Chr1 21402001 21489000 0 0 Deletion 86999 LOC_Os01g38280 retrotransposon protein, putative, unclassified, expressed FN4271-S Chr1 21402001 21489000 0 0 Deletion 86999 LOC_Os01g38290 retrotransposon protein, putative, unclassified FN4271-S Chr1 21402001 21489000 0 0 Deletion 86999 LOC_Os01g38300 retrotransposon protein, putative, unclassified, expressed FN4271-S Chr1 21402001 21489000 0 0 Deletion 86999 LOC_Os01g38310 expressed protein FN4271-S Chr1 30538071 G-A 0 0 Single Base Substitution 0 Homo FN4271-S Chr1 31960300 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g55470 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4271-S Chr1 37215083 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g64070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4271-S Chr10 10769997 G-A 0 0 Single Base Substitution 0 HET FN4271-S Chr10 1607586 1607587 0 0 Deletion 1 HET FN4271-S Chr10 20335001 20357000 0 0 Deletion 21999 LOC_Os10g37960 retrotransposon protein, putative, unclassified, expressed FN4271-S Chr10 20335001 20357000 0 0 Deletion 21999 LOC_Os10g37970 expressed protein FN4271-S Chr10 20335001 20357000 0 0 Deletion 21999 LOC_Os10g37980 prephenate dehydratase domain containing protein, expressed FN4271-S Chr10 20335001 20357000 0 0 Deletion 21999 LOC_Os10g37990 expressed protein FN4271-S Chr10 20335001 20357000 0 0 Deletion 21999 LOC_Os10g38000 dehydration-responsive element-binding protein, putative, expressed FN4271-S Chr10 20569587 20569587 0 0 Insertion 1 HET FN4271-S Chr10 21083617 G-A 0 0 Single Base Substitution 0 HET FN4271-S Chr10 2381917 A-T 0 0 Single Base Substitution 0 Homo FN4271-S Chr10 5128226 Chr3 13364667 0 Translocation 0 LOC_Os03g23110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4271-S Chr10 5128226 Chr3 13364667 0 Translocation 0 LOC_Os10g09500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4271-S Chr10 6582737 Chr9 7136331 0 Translocation 0 LOC_Os09g12480 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN4271-S Chr10 6582737 Chr9 7136331 0 Translocation 0 LOC_Os10g11870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4271-S Chr10 6927113 6927202 0 0 Deletion 89 splice_acceptor_variant&splice_donor_variant&disruptive_inframe_deletion&splice_region_variant&intro HET LOC_Os10g12450 expressed protein FN4271-S Chr10 7670349 7670349 0 0 Insertion 1 HET FN4271-S Chr10 9381625 G-A 0 0 Single Base Substitution 0 HET FN4271-S Chr11 2229216 A-T 0 0 Single Base Substitution 0 HET FN4271-S Chr11 23426205 T-C 0 0 Single Base Substitution 0 HET FN4271-S Chr11 27701516 27724824 0 0 Inversion 0 LOC_Os11g45780 RGH2B, putative, expressed FN4271-S Chr11 27701516 27724824 0 0 Inversion 0 LOC_Os11g45820 expressed protein FN4271-S Chr12 12647827 12647832 0 0 Deletion 5 HET FN4271-S Chr12 13504013 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g23770 retrotransposon protein, putative, LINE subclass, expressed FN4271-S Chr12 14082897 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g24610 retrotransposon protein, putative, unclassified, expressed FN4271-S Chr12 2798497 C-T 0 0 Single Base Substitution 0 Homo FN4271-S Chr12 3475695 A-G 0 0 Single Base Substitution 0 HET FN4271-S Chr12 5659391 5659393 0 0 Deletion 2 splice_donor_variant&intron_variant Homo LOC_Os12g10610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4271-S Chr12 9359271 T-A 0 0 Single Base Substitution 0 HET FN4271-S Chr12 9936999 9937000 0 0 Deletion 1 Homo FN4271-S Chr2 10495757 C-A 0 0 Single Base Substitution 0 HET FN4271-S Chr2 24515890 C-T 0 0 Single Base Substitution 0 HET FN4271-S Chr2 24515894 A-G 0 0 Single Base Substitution 0 HET FN4271-S Chr2 24759160 24759160 0 0 Insertion 1 HET FN4271-S Chr2 2500024 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g05220 retrotransposon protein, putative, unclassified, expressed FN4271-S Chr2 34287786 34287786 0 0 Insertion 4 HET FN4271-S Chr2 9396604 9396604 0 0 Insertion 1 HET FN4271-S Chr3 13471854 13471855 0 0 Deletion 1 HET FN4271-S Chr3 14090917 G-C 0 0 Single Base Substitution 0 HET FN4271-S Chr3 15435065 15435065 0 0 Insertion 2 HET FN4271-S Chr3 17215007 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g30150 expressed protein FN4271-S Chr3 191829 C-G 0 0 Single Base Substitution 0 HET FN4271-S Chr3 35920510 T-G 0 0 Single Base Substitution 0 HET FN4271-S Chr3 5328089 5328131 0 0 Deletion 42 inframe_deletion Homo LOC_Os03g10469 glycosyl hydrolase family 10 protein, putative, expressed FN4271-S Chr3 7553402 7553404 0 0 Deletion 2 frameshift_variant HET LOC_Os03g13920 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4271-S Chr3 7764497 Chr2 34428538 0 Translocation 0 LOC_Os02g56270 ENTH domain containing protein, expressed FN4271-S Chr3 7764498 Chr2 34427335 0 Translocation 0 FN4271-S Chr3 7780269 7780283 0 0 Deletion 14 Homo FN4271-S Chr4 12508144 12508144 0 0 Insertion 148 HET FN4271-S Chr4 1481509 C-T 0 0 Single Base Substitution 0 HET FN4271-S Chr4 21058187 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g34760 retrotransposon protein, putative, unclassified, expressed FN4271-S Chr4 22209905 C-A 0 0 Single Base Substitution 0 HET FN4271-S Chr4 23756326 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g39890 expressed protein FN4271-S Chr4 5215665 Chr1 1043678 0 Translocation 0 LOC_Os04g09720 OsSCP22 - Putative Serine Carboxypeptidase homologue, expressed FN4271-S Chr5 10643710 G-A 0 0 Single Base Substitution 0 HET FN4271-S Chr5 1226990 A-G 0 0 Single Base Substitution 0 HET FN4271-S Chr5 23644507 24252108 0 0 Inversion 0 LOC_Os05g40260 acetyltransferase, GNAT family, putative, expressed FN4271-S Chr5 24252452 24795251 0 0 Inversion 0 LOC_Os05g42370 retrotransposon protein, putative, unclassified, expressed FN4271-S Chr5 24448941 C-A 0 0 Single Base Substitution 0 HET FN4271-S Chr5 722618 Chr3 28717930 0 Translocation 0 FN4271-S Chr5 7799717 T-G 0 0 Single Base Substitution 0 HET FN4271-S Chr5 7800024 A-T 0 0 Single Base Substitution 0 HET FN4271-S Chr6 23465828 Chr4 20896893 0 Translocation 0 FN4271-S Chr6 30304613 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os06g50030 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN4271-S Chr6 6016055 6016061 0 0 Deletion 6 Homo FN4271-S Chr6 9387965 A-G 0 0 Single Base Substitution 0 HET FN4271-S Chr6 9410855 9468126 0 0 Inversion 0 FN4271-S Chr6 9410863 9472107 0 0 Inversion 0 FN4271-S Chr7 1241762 Chr1 39841277 0 Translocation 0 FN4271-S Chr7 12767028 Chr6 9472100 0 Translocation 0 FN4271-S Chr7 12767032 Chr6 9468128 0 Translocation 0 FN4271-S Chr7 13140862 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g23310 retrotransposon protein, putative, unclassified, expressed FN4271-S Chr7 21189500 Chr4 13727361 0 Translocation 0 FN4271-S Chr7 24941088 24941088 0 0 Insertion 1 HET FN4271-S Chr7 2744857 Chr4 35498044 0 Translocation 0 FN4271-S Chr7 5305050 5305052 0 0 Deletion 2 HET FN4271-S Chr7 5860634 G-A 0 0 Single Base Substitution 0 HET FN4271-S Chr8 11542155 11542155 0 0 Insertion 1 HET FN4271-S Chr8 12465040 Chr4 34006287 0 Translocation 0 FN4271-S Chr8 13547410 A-G 0 0 Single Base Substitution 0 HET FN4271-S Chr8 1544448 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g03330 expressed protein FN4271-S Chr8 23202615 G-T 0 0 Single Base Substitution 0 HET FN4271-S Chr9 14889770 G-T 0 0 Single Base Substitution 0 HET FN4271-S Chr9 20820374 T-C 0 0 Single Base Substitution 0 HET