FN429-S Chr1 11909249 11909262 0 0 Deletion 13 LOC_Os01g21320 NAD dependent epimerase/dehydratase family domain containing protein, expressed FN429-S Chr1 22195170 22195175 0 0 Deletion 5 LOC_Os01g39385 expressed protein FN429-S Chr1 2662527 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN429-S Chr1 3905569 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN429-S Chr1 39135892 39135901 0 0 Deletion 9 FN429-S Chr1 39340831 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN429-S Chr10 21816941 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN429-S Chr10 7752556 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g14795 retrotransposon protein, putative, unclassified, expressed FN429-S Chr11 10453751 Chr2 12969273 0 Translocation 0 FN429-S Chr11 12898408 12898412 0 0 Deletion 4 FN429-S Chr11 1623145 1623145 0 0 Insertion 2 FN429-S Chr11 18280684 Chr3 29622228 0 Translocation 0 FN429-S Chr11 18877542 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr11 21242754 21242770 0 0 Deletion 16 FN429-S Chr11 21272719 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr11 22038668 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g37320 LTPL79 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN429-S Chr11 23881667 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g40050 retrotransposon protein, putative, unclassified, expressed FN429-S Chr12 10050420 10050451 0 0 Deletion 31 LOC_Os12g17530 expressed protein FN429-S Chr12 12636112 T-G 0 0 Single Base Substitution 0 INTRON HET FN429-S Chr12 12963530 12963539 0 0 Deletion 9 FN429-S Chr12 13078840 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr12 14283473 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr12 172088 172092 0 0 Deletion 4 FN429-S Chr12 17457285 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g29380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN429-S Chr12 18702617 Chr11 23936814 0 Translocation 0 FN429-S Chr12 20138349 Chr5 13277467 0 Translocation 0 LOC_Os12g33280 retrotransposon protein, putative, unclassified, expressed FN429-S Chr12 22908954 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr12 23551114 23551114 0 0 Insertion 2 FN429-S Chr12 3574320 3574330 0 0 Deletion 10 LOC_Os12g07270 bile acid sodium symporter family protein, putative, expressed FN429-S Chr12 4928108 C-T 0 0 Single Base Substitution 0 INTRON HET FN429-S Chr2 18880276 18880288 0 0 Deletion 12 FN429-S Chr2 19744260 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN429-S Chr2 22382683 22382686 0 0 Deletion 3 LOC_Os02g37050 phosphatidylinositolglycan class N family protein, expressed FN429-S Chr2 23630707 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN429-S Chr2 3073568 3073568 0 0 Insertion 1 FN429-S Chr2 32081490 32081496 0 0 Deletion 6 LOC_Os02g52420 peptidase, M24 family protein, putative, expressed FN429-S Chr2 32081505 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g52420 peptidase, M24 family protein, putative, expressed FN429-S Chr2 32216566 32216571 0 0 Deletion 5 FN429-S Chr2 708451 708495 0 0 Deletion 44 FN429-S Chr3 15358422 15358432 0 0 Deletion 10 FN429-S Chr3 21611196 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr3 22717 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN429-S Chr3 22831793 22831800 0 0 Deletion 7 FN429-S Chr3 30694461 G-C 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN429-S Chr3 31349668 31349681 0 0 Deletion 13 LOC_Os03g55100 cyclic nucleotide-gated ion channel 2, putative, expressed FN429-S Chr3 3250001 3250003 0 0 Deletion 2 FN429-S Chr3 3909786 3909788 0 0 Deletion 2 FN429-S Chr4 15895711 15895797 0 0 Deletion 86 FN429-S Chr4 16603423 16603429 0 0 Deletion 6 LOC_Os04g28120 response regulator receiver domain containing protein, expressed FN429-S Chr4 17407611 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g29330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN429-S Chr4 1926561 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr4 21526224 21526229 0 0 Deletion 5 FN429-S Chr4 34490206 34490212 0 0 Deletion 6 LOC_Os04g57880 heat shock protein DnaJ, putative, expressed FN429-S Chr4 4381115 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN429-S Chr4 5348796 5348797 0 0 Deletion 1 FN429-S Chr5 17177457 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr5 22099348 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN429-S Chr5 5295969 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN429-S Chr6 13847285 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN429-S Chr6 14857884 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN429-S Chr6 24588059 24588069 0 0 Deletion 10 FN429-S Chr6 27589008 27589015 0 0 Deletion 7 LOC_Os06g45560 retrotransposon protein, putative, unclassified, expressed FN429-S Chr6 3999411 3999411 0 0 Insertion 2 FN429-S Chr6 4793476 4793477 0 0 Deletion 1 FN429-S Chr6 6161630 6161631 0 0 Deletion 1 LOC_Os06g11630 OsFBX192 - F-box domain containing protein, expressed FN429-S Chr6 6678861 6678865 0 0 Deletion 4 LOC_Os06g12320 transmembrane amino acid transporter protein, putative, expressed FN429-S Chr7 14259863 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr7 18011209 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr7 19995303 19995312 0 0 Deletion 9 FN429-S Chr7 20360120 20360121 0 0 Deletion 1 FN429-S Chr7 24719628 24939848 0 0 Inversion 220220 FN429-S Chr7 28247783 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g47260 H-BTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed FN429-S Chr7 29249124 A-G 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN429-S Chr8 10982403 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g17890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN429-S Chr8 1537042 1537046 0 0 Deletion 4 LOC_Os08g03310 zinc finger family protein, putative, expressed FN429-S Chr8 16084549 16084550 0 0 Deletion 1 LOC_Os08g26400 retrotransposon, putative, centromere-specific, expressed FN429-S Chr8 16087853 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN429-S Chr8 16087856 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN429-S Chr8 24487704 24487704 0 0 Insertion 1 FN429-S Chr8 25179440 25179446 0 0 Deletion 6 LOC_Os08g39760 retrotransposon protein, putative, unclassified, expressed FN429-S Chr8 2546531 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN429-S Chr8 8130054 8130056 0 0 Deletion 2 FN429-S Chr9 12042302 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr9 12908568 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN429-S Chr9 6474717 C-T 0 0 Single Base Substitution 0 INTERGENIC HET