FN4312-S Chr1 10277886 A-G 0 0 Single Base Substitution 0 Homo FN4312-S Chr1 28852823 28852829 0 0 Deletion 6 Homo FN4312-S Chr1 28962461 C-T 0 0 Single Base Substitution 0 Homo FN4312-S Chr1 507669 C-T 0 0 Single Base Substitution 0 HET FN4312-S Chr10 16791207 A-T 0 0 Single Base Substitution 0 HET FN4312-S Chr10 8377240 C-G 0 0 Single Base Substitution 0 Homo FN4312-S Chr11 14662231 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g25700 tropinone reductase, putative, expressed FN4312-S Chr11 15982163 Chr8 7146075 0 Translocation 0 LOC_Os08g12130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4312-S Chr11 15982163 Chr8 7146075 0 Translocation 0 LOC_Os11g27760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4312-S Chr11 21765588 A-G 0 0 Single Base Substitution 0 HET FN4312-S Chr11 24621638 Chr8 9667766 0 Translocation 0 LOC_Os08g15880 NBS-LRR disease resistance protein, putative, expressed FN4312-S Chr11 6169003 Chr3 15356587 0 Translocation 0 LOC_Os03g26890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4312-S Chr11 6169003 Chr3 15356587 0 Translocation 0 LOC_Os11g11150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4312-S Chr11 6449375 6449376 0 0 Deletion 1 HET FN4312-S Chr11 8000001 8049000 0 0 Deletion 48999 LOC_Os11g14280 transposon protein, putative, unclassified, expressed FN4312-S Chr11 8000001 8049000 0 0 Deletion 48999 LOC_Os11g14290 expressed protein FN4312-S Chr11 8000001 8049000 0 0 Deletion 48999 LOC_Os11g14300 la domain containing protein, expressed FN4312-S Chr11 8000001 8049000 0 0 Deletion 48999 LOC_Os11g14310 expressed protein FN4312-S Chr11 8000001 8049000 0 0 Deletion 48999 LOC_Os11g14320 expressed protein FN4312-S Chr11 8000001 8049000 0 0 Deletion 48999 LOC_Os11g14330 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr11 9990534 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g17840 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4312-S Chr12 17968647 G-T 0 0 Single Base Substitution 0 HET FN4312-S Chr12 18587603 Chr5 2015582 0 Translocation 0 LOC_Os12g30950 F-box protein interaction domain containing protein, expressed FN4312-S Chr12 18848707 Chr4 4358506 0 Translocation 0 FN4312-S Chr12 21982395 21982395 0 0 Insertion 1 HET FN4312-S Chr12 22349211 Chr8 248927 0 Translocation 0 FN4312-S Chr12 22406307 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g36590 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr12 22816542 C-T 0 0 Single Base Substitution 0 HET FN4312-S Chr12 23280852 A-T 0 0 Single Base Substitution 0 HET FN4312-S Chr12 7921727 T-C 0 0 Single Base Substitution 0 HET FN4312-S Chr12 9802432 Chr1 530979 0 Translocation 0 FN4312-S Chr2 13927001 13948000 0 0 Deletion 20999 LOC_Os02g24030 hypothetical protein FN4312-S Chr2 13927001 13948000 0 0 Deletion 20999 LOC_Os02g24040 retrotransposon protein, putative, unclassified FN4312-S Chr2 13927001 13948000 0 0 Deletion 20999 LOC_Os02g24050 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr2 13927001 13948000 0 0 Deletion 20999 LOC_Os02g24060 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr2 13927001 13948000 0 0 Deletion 20999 LOC_Os02g24070 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr2 27401229 27401231 0 0 Deletion 2 Homo FN4312-S Chr2 33822288 34195565 0 0 Inversion 0 LOC_Os02g55220 carboxyl-terminal proteinase, putative FN4312-S Chr2 4414448 A-C 0 0 Single Base Substitution 0 HET FN4312-S Chr2 808228 G-A 0 0 Single Base Substitution 0 HET FN4312-S Chr3 10674142 Chr2 20649680 0 Translocation 0 FN4312-S Chr3 16810630 T-A 0 0 Single Base Substitution 0 HET FN4312-S Chr3 18699629 G-C 0 0 Single Base Substitution 0 HET FN4312-S Chr3 28984926 A-G 0 0 Single Base Substitution 0 HET FN4312-S Chr3 3166432 A-G 0 0 Single Base Substitution 0 HET FN4312-S Chr3 34638279 34638280 0 0 Deletion 1 frameshift_variant HET LOC_Os03g60960 cytokinin-N-glucosyltransferase 1, putative, expressed FN4312-S Chr4 11308052 11308054 0 0 Deletion 2 Homo FN4312-S Chr4 15002505 15002505 0 0 Insertion 1 HET FN4312-S Chr4 18043888 18043888 0 0 Insertion 2 frameshift_variant HET LOC_Os04g30240 OsWAK60 - OsWAK receptor-like protein kinase, expressed FN4312-S Chr4 25756939 Chr3 11224776 0 Translocation 0 LOC_Os03g19950 expressed protein FN4312-S Chr4 31731092 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g53270 retrotransposon protein, putative, Ty3-gypsy subclass FN4312-S Chr4 33384195 A-T 0 0 Single Base Substitution 0 HET FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08510 OsFBX117 - F-box domain containing protein, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08520 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08530 retrotransposon protein, putative, unclassified FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08550 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08570 uncharacterized PE-PGRS family protein PE_PGRS20, putative, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08580 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08590 expressed protein FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08600 ZOS4-05 - C2H2 zinc finger protein, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08610 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08620 retrotransposon protein, putative, unclassified FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08630 expressed protein FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08640 cadmium tolerance factor, putative, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08650 expressed protein FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08660 expressed protein FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08670 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08680 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08690 expressed protein FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08700 hypothetical protein FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08720 transposon protein, putative, CACTA, En/Spm sub-class FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08730 hypothetical protein FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08740 ethylene receptor, putative, expressed FN4312-S Chr4 4598001 4751000 0 0 Deletion 152999 LOC_Os04g08749 expressed protein FN4312-S Chr4 5995601 6156034 0 0 Inversion 0 LOC_Os04g11260 transposon protein, putative, unclassified FN4312-S Chr4 7318829 C-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os04g13220 ABC transporter family protein, putative, expressed FN4312-S Chr4 7318830 C-T 0 0 Single Base Substitution 0 Homo FN4312-S Chr5 14584883 14584883 0 0 Insertion 22 HET FN4312-S Chr5 1682944 C-A 0 0 Single Base Substitution 0 HET FN4312-S Chr5 19069240 C-T 0 0 Single Base Substitution 0 HET FN4312-S Chr5 880512 A-G 0 0 Single Base Substitution 0 HET FN4312-S Chr6 15302130 15302133 0 0 Deletion 3 HET FN4312-S Chr6 15597433 G-T 0 0 Single Base Substitution 0 HET FN4312-S Chr6 17856206 C-T 0 0 Single Base Substitution 0 HET FN4312-S Chr6 20297410 G-A 0 0 Single Base Substitution 0 HET FN4312-S Chr6 20790334 G-A 0 0 Single Base Substitution 0 HET FN4312-S Chr6 22873582 22873587 0 0 Deletion 5 HET FN4312-S Chr6 24914840 24914840 0 0 Insertion 1 Homo FN4312-S Chr6 8526061 G-C 0 0 Single Base Substitution 0 HET FN4312-S Chr7 10965804 G-A 0 0 Single Base Substitution 0 HET FN4312-S Chr7 11368122 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g19200 retrotransposon protein, putative, unclassified, expressed FN4312-S Chr7 15178283 C-A 0 0 Single Base Substitution 0 HET FN4312-S Chr7 19727453 Chr6 30023819 0 Translocation 0 LOC_Os06g49600 hypothetical protein FN4312-S Chr7 19727453 Chr6 30023819 0 Translocation 0 LOC_Os07g33020 hypothetical protein FN4312-S Chr7 20247380 20247385 0 0 Deletion 5 Homo FN4312-S Chr7 21453047 21453048 0 0 Deletion 1 Homo FN4312-S Chr7 22455724 Chr5 7557104 0 Translocation 0 FN4312-S Chr7 23604316 23604316 0 0 Insertion 1 HET FN4312-S Chr8 13100644 13100645 0 0 Deletion 1 Homo FN4312-S Chr9 1040178 1040180 0 0 Deletion 2 Homo FN4312-S Chr9 14647024 Chr6 28280471 0 Translocation 0 LOC_Os06g46580 expressed protein FN4312-S Chr9 2160791 G-A 0 0 Single Base Substitution 0 Homo FN4312-S Chr9 22783791 A-T 0 0 Single Base Substitution 0 Homo FN4312-S Chr9 22783792 A-T 0 0 Single Base Substitution 0 Homo